NO14G02040, NO14G02040 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G02040 vs. NCBI_GenBank
Match: XP_005855407.1 (trafficking protein particle complex subunit 4, partial [Nannochloropsis gaditana CCMP526] >XP_005855438.1 trafficking protein particle complex subunit 4, partial [Nannochloropsis gaditana CCMP526] >EKU20924.1 trafficking protein particle complex subunit 4, partial [Nannochloropsis gaditana CCMP526] >EKU20956.1 trafficking protein particle complex subunit 4, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 284.3 bits (726), Expect = 2.200e-73 Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 0 Query: 1 MFLHLFIISRSGGLIYNKDLSVSAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRTAVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCELFQQGVERLIERNSRELKKARSD 143 MFLHLF+ISRSGGLIYNKDLS SAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRT VKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRC+LFQQGVERLIERNSRELKKARSD Sbjct: 4 MFLHLFVISRSGGLIYNKDLSSSAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRTGVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCDLFQQGVERLIERNSRELKKARSD 145
BLAST of NO14G02040 vs. NCBI_GenBank
Match: EWM24578.1 (trafficking protein particle complex subunit 4 [Nannochloropsis gaditana]) HSP 1 Score: 282.3 bits (721), Expect = 8.200e-73 Identity = 137/142 (96.48%), Postives = 140/142 (98.59%), Query Frame = 0 Query: 1 MFLHLFIISRSGGLIYNKDLSVSAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRTAVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCELFQQGVERLIERNSRELKKARSD 143 MFLHLF+ISRSGGLIYNK+LS SAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRT VKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRC+LFQQGVERLIERNSRELKKARSD Sbjct: 1 MFLHLFVISRSGGLIYNKNLSSSAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRTGVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCDLFQQGVERLIERNSRELKKARSD 142
BLAST of NO14G02040 vs. NCBI_GenBank
Match: CBJ48431.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 196.1 bits (497), Expect = 7.700e-47 Identity = 94/133 (70.68%), Postives = 110/133 (82.71%), Query Frame = 0 Query: 1 MFLHLFIISRSGGLIYNKDLSVSAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRTAVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCELFQQGVERLIERNS 134 MFL LF++++SGGLIYN++LS +APRL N+WL LGSTFH LH+IAAQVAP+ SSGIEKLE D KLQ FQ+ T VKFV+TAE GTPDL VL IYELY DYVLKNPFYE++MPIRCELF +E LIER+S Sbjct: 1 MFLQLFVVNKSGGLIYNQNLSSAAPRLNSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGGVLQEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHS 133
BLAST of NO14G02040 vs. NCBI_GenBank
Match: GAY03468.1 (Hypothetical protein PINS_011291 [Pythium insidiosum]) HSP 1 Score: 171.4 bits (433), Expect = 2.000e-39 Identity = 80/143 (55.94%), Postives = 104/143 (72.73%), Query Frame = 0 Query: 1 MFLHLFIISRSGGLIYNKDLSVSAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRTAVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCELFQQGVERLIERNSRELKKARSDG 144 M L+II++SGGLIY DLS +APRL+ N+ L LGSTFH +H+IA AP+AS GIE LE D +LQCFQ+ T +KF +TA GTPDLD+ L IYELY DYVLKNPFYE++MPIRC LF G++ +++ + + + R G Sbjct: 1 MLHSLYIINKSGGLIYQLDLSSAAPRLSSNDHLRLGSTFHSMHAIAVLAAPVASGGIESLETDTFRLQCFQTPTGIKFFITAALGTPDLDHALRTIYELYVDYVLKNPFYELEMPIRCSLFNAGLKSFVDKFNADSARRRPQG 143
BLAST of NO14G02040 vs. NCBI_GenBank
Match: CCI39875.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 171.0 bits (432), Expect = 2.700e-39 Identity = 78/136 (57.35%), Postives = 103/136 (75.74%), Query Frame = 0 Query: 5 LFIISRSGGLIYNKDLSVSAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRTAVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCELFQQGVERLIERNSRELKKAR 141 L+II++SGGLIY +DLS +AP+L+ N+ L LGSTFH +H+IAA AP+ S GI LE D +LQCFQ+ T +KF +TA+ GTPDLDN L IYELY DYVLKNPFYE++MPIRC LF G++ +E+ + + + R Sbjct: 5 LYIINKSGGLIYQQDLSPAAPKLSSNDHLRLGSTFHSMHAIAALAAPVVSGGINSLETDTFRLQCFQTLTGIKFFITAQLGTPDLDNALKTIYELYVDYVLKNPFYELEMPIRCILFNTGLKSFVEKFNSDTSRRR 140
BLAST of NO14G02040 vs. NCBI_GenBank
Match: CCA19185.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 167.2 bits (422), Expect = 3.800e-38 Identity = 76/136 (55.88%), Postives = 103/136 (75.74%), Query Frame = 0 Query: 5 LFIISRSGGLIYNKDLSVSAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRTAVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCELFQQGVERLIERNSRELKKAR 141 L+II++SGGLIY +DLS +AP+L+ N+ L LGSTFH +H+IAA AP+AS GI LE D +LQCFQ+ T +KF +TA+ GT D+DN L IYELY DYVLKNPFYE++MPIRC LF G++ +++ + + + R Sbjct: 5 LYIINKSGGLIYQQDLSPAAPKLSSNDHLRLGSTFHSMHAIAALAAPVASGGINSLETDTFRLQCFQTLTGIKFFITAQLGTLDIDNALKTIYELYVDYVLKNPFYELEMPIRCTLFNAGLKLFVDKFNNDSSRRR 140
BLAST of NO14G02040 vs. NCBI_GenBank
Match: XP_002291636.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91743.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 164.9 bits (416), Expect = 1.900e-37 Identity = 81/147 (55.10%), Postives = 107/147 (72.79%), Query Frame = 0 Query: 2 FLHLFIISRSGGLIYNKDLSVSAPRLTVNEWLVLGSTFHGLHSIAAQVAPL-------ASSGIEKLECDNLKLQCFQSRTAVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCELFQQGVERLIERNSRE-LKKAR 141 FLHLFI+++SGGLI ++ L SAP++ NEWL +GSTFH LH+IAA+ +P GIE+++ + L+C Q+RT +KFVLTAEPGTPD+D VL IY LYAD LK+PFYE++MPIRCELF ++ LIER + E + KAR Sbjct: 3 FLHLFIVNKSGGLILHRPLGPSAPKIGTNEWLRIGSTFHSLHAIAAEASPKRLPGNKNPDDGIEEIQGGGIILKCLQTRTGIKFVLTAEPGTPDMDTVLREIYVLYADCALKDPFYELEMPIRCELFTNAIDGLIERVAVEGVGKAR 149
BLAST of NO14G02040 vs. NCBI_GenBank
Match: OEU10016.1 (Sybindin-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 163.3 bits (412), Expect = 5.500e-37 Identity = 79/146 (54.11%), Postives = 105/146 (71.92%), Query Frame = 0 Query: 1 MFLHLFIISRSGGLIYNKDLSVSAPRLTVNEWLVLGSTFHGLHSIAAQVAPL---------ASSGIEKLECDNLKLQCFQSRTAVKFVLTAEPGTP---DLDNVLHGIYELYADYVLKNPFYEMDMPIRCELFQQGVERLIERNSR 135 MFLHLFI+++SGGLI+++ LS AP+L NEWL +GSTFH L++IA + +P+ A GIE+++ D + L CFQ+RT +KFV+TAEP T DL +L IY LY D LK+PFYE++MPIRCELF QGVE LI++ SR Sbjct: 1 MFLHLFIVNKSGGLIHHRSLSSKAPKLGTNEWLRIGSTFHSLYAIANEASPVKLPGNKKNGADDGIEEIQADGMTLNCFQTRTGLKFVITAEPNTTAAVDLGQILREIYMLYTDCCLKDPFYELEMPIRCELFTQGVENLIQKYSR 146
BLAST of NO14G02040 vs. NCBI_GenBank
Match: EJK49950.1 (hypothetical protein THAOC_31128 [Thalassiosira oceanica]) HSP 1 Score: 160.2 bits (404), Expect = 4.700e-36 Identity = 75/140 (53.57%), Postives = 99/140 (70.71%), Query Frame = 0 Query: 2 FLHLFIISRSGGLIYNKDLSVSAPRLTVNEWLVLGSTFHGLHSIAAQVAPL----------ASSGIEKLECDNLKLQCFQSRTAVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCELFQQGVERLIER 132 FLHLFI+++SGGLI ++ L AP + N+WL +GSTFH LH+IAA+ +P+ A GI+++E + L+C Q+RT +KFVLTAEPGT D+D L IY LYAD LK+PFYE++MPIRCELF V+ LIER Sbjct: 3 FLHLFIVNKSGGLILHRSLGPRAPSIGTNDWLRIGSTFHSLHAIAAEASPVRLPKNKNPSGADDGIQQIEGSGVTLKCLQTRTGIKFVLTAEPGTTDIDTALREIYVLYADCALKDPFYELEMPIRCELFTSAVDNLIER 142
BLAST of NO14G02040 vs. NCBI_GenBank
Match: OWZ17777.1 (hypothetical protein PHMEG_0008229 [Phytophthora megakarya]) HSP 1 Score: 157.9 bits (398), Expect = 2.300e-35 Identity = 73/140 (52.14%), Postives = 100/140 (71.43%), Query Frame = 0 Query: 1 MFLHLFIISRSGGLIYNKDLSVSAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRTAVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCELFQQGVERLIERNSRELKKAR 141 M L++I+++GGLIY +DLS +AP+L+ N+ L LGSTFH +H+IAA AP S GI+ LE +LQC Q+ T +KF +TA GTPDLD L +YELY DYVLKNPFYE++MPIRC LF G++ +++ + E + R Sbjct: 1 MLHSLYVINKAGGLIYQQDLSPAAPKLSSNDHLRLGSTFHSMHAIAALAAPTNSGGIDSLETATFRLQCLQTPTGIKFFITAALGTPDLDVALQTVYELYVDYVLKNPFYELEMPIRCSLFNTGLKTFVDKFNLESGRRR 140 The following BLAST results are available for this feature:
BLAST of NO14G02040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G02040 ID=NO14G02040|Name=NO14G02040|organism=Nannochloropsis oceanica|type=gene|length=432bpback to top protein sequence of NO14G02040.1 >NO14G02040.1-protein ID=NO14G02040.1-protein|Name=NO14G02040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=144bpback to top Synonyms
Publications
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