NO14G01960, NO14G01960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO14G01960 vs. NCBI_GenBank
Match: EWM24633.1 (hypothetical protein Naga_100117g17 [Nannochloropsis gaditana]) HSP 1 Score: 474.6 bits (1220), Expect = 3.200e-130 Identity = 237/329 (72.04%), Postives = 268/329 (81.46%), Query Frame = 0 Query: 82 PDGSDGMPPMPLGGESEYEYESEFPDQQAEIEYMADDELLAKYRADMQNSQDQWQLNLFLKAQTGTWSGVWSEYTPVPNGGANGDTVLRMTNIYKGRQECVGDNEARTVSWRDLTLLHAADGGPLEPVVVAEHTMVPAMFRGGVGSMAADNVFSRSSVQAKEGGREGEEVFEAETWIRQGNYRTRVSFVYESKGSTEAFEAHKVVVKKERLGMQGPTAEEPELFGSSGRGIYDSSARMPGSWELSLHGGLSLAFPPLLPRGEKGAVIVDWTAGYMRFQADRLFDLPDGTLGSLEVTQIGTEDSMKFKLEEKE---AAEGLETAGVVGGE 408 P+ G+ PMP GGESEYEY+SE+ DQQAEIEY+ DDELLA+YRADMQNS DQWQLNLFLKAQTG WSGVWSEYTP PN G NG+TVLRMTNIYKGR EC GD +AR+V WR++TLLHAADGGPLEPVVV E M P FRG +G+MAADNVFS S V+ K EVFEAE WIRQG+YRTRV+FVY+S AF+A KV+VKKERLG +GPTAEEPELFGSSGRGIYD +AR+PGSW LSLHGGLSLAFPP LPRG++GAVIVDWTAG MRFQADR+FD PDGTLGSLEVTQIGT+DS+ F + + A+ +A GGE Sbjct: 97 PNLEHGVSPMPTGGESEYEYQSEYTDQQAEIEYLGDDELLARYRADMQNSNDQWQLNLFLKAQTGIWSGVWSEYTPEPNSGPNGETVLRMTNIYKGRHECEGDYDARSVWWREVTLLHAADGGPLEPVVVGERRMEPTSFRGELGAMAADNVFSCSHVRFK----GATEVFEAEIWIRQGDYRTRVTFVYKSPDPAYAFQASKVLVKKERLGKEGPTAEEPELFGSSGRGIYDPNARVPGSWVLSLHGGLSLAFPPTLPRGQRGAVIVDWTAGTMRFQADRIFDRPDGTLGSLEVTQIGTQDSLTFTIPDDADAGVAKAAASADTNGGE 421
BLAST of NO14G01960 vs. NCBI_GenBank
Match: CBN76250.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 125.9 bits (315), Expect = 2.800e-25 Identity = 107/338 (31.66%), Postives = 151/338 (44.67%), Query Frame = 0 Query: 97 SEYEYESEFPDQQAEIEYMADDELLAKYRADMQNSQDQWQLNLFLKAQTGTWSGVWSEYT--PVPNGGANGDTVLRMTNIYKGRQECVGDNEARTV--SWRDLTLLH----AADGGPLEPVVVAE---------HTMVPAMFRGGVGSMAADNVF-SRSSVQAKEGGREGEEVFEAETWIRQGNYRTRVSFVY--------------------ESKGSTEAFEAHKVVVKKERLGMQGP--TAEEPELFGSSGRGIYD--SSARMPGSWELSLHGGLSLAFPPLLPRGEKGAVIVDWTAGYMRFQADRLFDLPDGTLGSLEVTQIGTEDSMKFKLEEK 393 SEY YE EF + Q E E AD+E LA++R + + D+WQ + G W G W EY + G + M I G++ R V S D + A GG + V E T+ FRGG G+ N + S ++ GG +G + E +R + R R F Y +V V +E L P +EPEL+GS+G+G+YD S +R P + + GGL++ FP + G+ G VDWTAG R+QADR+FD+ DG+L LEVT+IGT+D+ F EK Sbjct: 141 SEYGYEPEF-ELQGE-EPNADEETLARWRLEKLLANDRWQFGKYGTQNVGNWIGSWQEYVAEDLSAGSDPESDIGAMIGIIPGKKFVATTKITRRVIESAEDTKIFEHEQGQATGGEGQGAVGYESEACPQPVVETLFSDSFRGGNGTQVVGNAYTSAETLAVAAGGADGPWI---EVGLRVQDVRMRCVFEYGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRRVFVVREGLDRLPPEDADKEPELYGSAGKGLYDPPSLSRSPLYFSIYAEGGLTMRFPLRVEEGQGGVFSVDWTAGSRRYQADRVFDVLDGSLRRLEVTEIGTQDAEVFLPMEK 473
BLAST of NO14G01960 vs. NCBI_GenBank
Match: KOO24191.1 (conserved unknown protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 105.5 bits (262), Expect = 4.000e-19 Identity = 93/300 (31.00%), Postives = 140/300 (46.67%), Query Frame = 0 Query: 96 ESEYEYESEFPDQQAEIEYMADDELLAKYRADMQNSQDQWQLNLFLKAQTGTWSGVWSEYTPVPNGGANGDTVLRMTNIYKGRQECVGDNEARTVSWRDLTLLHAADGGPLEPVVVAEHTMVPAMFRGGVGSMAADNVFSRSSVQAKEGG---REGEEVFEAETWIRQGNYRTRVSFVY-ESKGSTEAFEAHKV----VVKKERLGMQ--GPTAEEPELFGSSGRGIYD-SSARMPGSWELSLHGGLSLAFPPLLPRGEKGAVIVDWTAGYMRFQADRLFDLPDGTLGSLEVTQIGTEDS 385 E + + +S F E E + D+ LL +YR + +WQLN F ++Q G W+G Y D RM + K + EAR + + L + + + AE + A FR VG+MA + FS S A GG R GE + E + + R R +Y +G A + + +V++ R G Q A +L G+ GRG+YD G L L GG++LAFP + G G + +DW AG MR+Q DR + + DG+L SLE+T+I +D+ Sbjct: 125 EEQRKDDSAFQSDTIE-EDIEDEALLEQYRQKRWDDNARWQLNTFAQSQLGKWAGHMELYL--------ADDAGRM--LPKELKSTACSCEARVCASNTIGLTESLPEAAAQLTLEAELGL--AAFRPEVGNMAVASAFSVSRRGADVGGESARAGEPLL-LELALGEAERRVRCKLLYVADRGEAAAVRPYSIAQLAIVREVRGGGQFIDGNAGSADLDGTPGRGLYDPPPGDKSGYISLYLEGGMTLAFPTSVAAGAAGVISLDWIAGSMRYQIDRKWKVFDGSLSSLELTEIRKDDA 410
BLAST of NO14G01960 vs. NCBI_GenBank
Match: XP_009041402.1 (hypothetical protein AURANDRAFT_72648 [Aureococcus anophagefferens] >EGB03850.1 hypothetical protein AURANDRAFT_72648 [Aureococcus anophagefferens]) HSP 1 Score: 75.9 bits (185), Expect = 3.400e-10 Identity = 85/306 (27.78%), Postives = 115/306 (37.58%), Query Frame = 0 Query: 119 ELLAKYRADMQNSQDQWQLNLFLKAQTGTWSGVWSEYTPVPNG---GANGDTVLRMTNIYKGRQECVGDNEARTVSWR--DLTLLHAADGGPLEPVVVAEH------TMVPAMFR------GGVGSMAADNVFSRSSVQAKEGGREGEEVFEAETWIRQGNYRTRVSFVYE-SKGSTEAFEAHKVVVKKERLGMQGPTAEEPELFGSSGRGIYDSSARM------------PGSWELSLHGGLSLAFPPLLPRGE-------KGAVIVDWTAGYMRFQADRLFDLPDGTLGSLEVTQIGTEDSMKF 388 E LA+ R + SQD WQ + F KA G+W G Y A D L + D A VS + + +L + G EP A T+ PA FR G +G AA+ +A R + + W R + + YE + G AF + G P + + G G+YD R+ G EL L G ++ AFP L G G V +D AG MR Q DR+FD P G L S E+T I +D+ KF Sbjct: 205 EALAERRRVNRRSQDCWQFDQFTKAFAGSWRGAGERYVAAGRALAVAATFDAKLDLERRDDATVASAHDAWALAVSEQRTNFVVLDSLGDGAAEPAREAAAPPLGAVTLKPATFRAEARDGGELGGTAANG-------EAFSTARVDGDALVVDVWARAADDALSLRVAYEKTTGGAWAFACCDLARWCPAGGAAAPAGD------ALGTGLYDVHRRLRDMATRGALDESVGIHELRLPGRVTAAFPRTLDPGRGGLNANGGGVVSLDLVAGDMRIQVDRVFDTPLGDLASFEITDILVDDAEKF 497
BLAST of NO14G01960 vs. NCBI_GenBank
Match: CEL93669.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 70.1 bits (170), Expect = 1.800e-8 Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = 0 Query: 284 KVVVKKERLGMQGPTAEEPELFGSSGRGIYDSSARMPGS--WELSLHGGLSLAFPPLLPRGEKGAVIVDWTAGYMRFQADRLFDLPDGTLGSLEVTQIGTEDS 385 ++ V +ERLG + P A E +G G G+YD A G +EL +G L+L+FP + GE GA+ +DWT R+QADR F +L + E T+I D+ Sbjct: 292 QLAVIRERLG-EPPLANEDAFYGEWGHGLYDKPAERIGQNYFELFFNGHLTLSFPLSIGEGEAGALSLDWTPDMRRYQADRKFRTYGPSLRTFETTEILARDA 393 The following BLAST results are available for this feature:
BLAST of NO14G01960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G01960 ID=NO14G01960|Name=NO14G01960|organism=Nannochloropsis oceanica|type=gene|length=1492bpback to top protein sequence of NO14G01960.1 >NO14G01960.1-protein ID=NO14G01960.1-protein|Name=NO14G01960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=415bpback to top Synonyms
Publications
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