NO14G01950, NO14G01950 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G01950 vs. NCBI_GenBank
Match: EWM24630.1 (cockayne syndrome 1 [Nannochloropsis gaditana]) HSP 1 Score: 527.7 bits (1358), Expect = 4.100e-146 Identity = 285/474 (60.13%), Postives = 342/474 (72.15%), Query Frame = 0 Query: 3 ERLLAHRAEGRLRPPAFEAGVHARRLRHVSPSARVEIKNGQRGPVNHLDLDPYEDRFLLVAAGDATVGLYDLGATERVPQDDDDGASTGPLLRVRSLQVTPRASVLGAGGTRDNTSDTAAGVAASMALAARGPPPTEGHRYSVTSVQWYPLDTGLFVSGSTDGTVRVWDTNVFANAGTFDLGSNVHALALSAAMRTHSLVAVGTDDRRVRLCDLKSGGSSHLLTGHAEAVTTVAWSPTQEHLLAXXXXXXXXXXXXXXRSGTSACVMTLDQYTDHRGHAPGMMGGATELAKAHNGWIVSVEFTPNGCYLLSAGTDKRLRLWNAYTGDNTLVNYAGTHNDKACGWKVKAIQTGSKGGDELRSGGGTMVVYPNGASGEVLLYPLMPQN--RHRRRRKGAGTI---GSVGRPVHSLRGHLDAVQSVVHRRDAEQIITGGADSLLLVFDCSRHDIQNSQCLDDEEGDKSPKDGFGRKR 472 + L+ RAEG LRP A E VH RRL H + S R+E+K+ Q+GP+N +DLDP ++R+LLVA+GDATVGLYD+ + DG RV+SL VTPR D T + + ALAAR PP+ GHRYSVTSVQWYP DTG+FVSGSTDG+V+VWDTN+F +AGTF LGS VHA+A+S AM + SL+AVGTDDRRVRLCDLKSGGSSHLL GHA+ VTTVAWSPT+E XXXXXXXXXXXXXX C+ TLDQ DHRG A G++ T LAKAH GW+VS++FTPNGC+L+SAGTDKRLRLWNA +G NTL+NYAGTHND A GWK+KAIQT + G G G M++YPNG SGEVLL+PL+ + R R + +G + +VG+P H LRGHLD VQS+ +RRDA QIITGGADSLLLVFDCSRHD + S+ LD E + PK G KR Sbjct: 4 QSLITRRAEGHLRPSALETSVHTRRLMHAALSTRIEVKSSQQGPINQIDLDPCDERYLLVASGDATVGLYDMEVEPAQDGSESDGQDGSMPSRVQSLHVTPRTRAHVTENIGDLTRGRVSSSIGNAALAARMQPPSGGHRYSVTSVQWYPPDTGIFVSGSTDGSVQVWDTNLFVSAGTFSLGSKVHAVAMSRAMLSRSLIAVGTDDRRVRLCDLKSGGSSHLLAGHAQTVTTVAWSPTEEXXXXXXXXXXXXXXXXXXXXXXXXCLKTLDQDADHRGRATGILSAPTALAKAHAGWVVSLDFTPNGCWLVSAGTDKRLRLWNAMSGQNTLLNYAGTHNDIAVGWKIKAIQTAGRRGIGRDWGEGNMILYPNGRSGEVLLFPLLSRGGMSGRSRSQSSGRLERPRAVGQPSHRLRGHLDVVQSMAYRRDAGQIITGGADSLLLVFDCSRHDKEESRLLDGENDGQYPK---GSKR 474
BLAST of NO14G01950 vs. NCBI_GenBank
Match: CBJ31103.1 (WD-repeat protein, putative [Ectocarpus siliculosus]) HSP 1 Score: 238.4 bits (607), Expect = 5.000e-59 Identity = 164/494 (33.20%), Postives = 226/494 (45.75%), Query Frame = 0 Query: 4 RLLAHRAEGRLRPPAFEAGVHARRLRHVSPSARVEIKNGQRGPVNHLDLDPYEDRFLLVAAGDATVGLYDL-GATERVPQ-DDDDGASTGPLLRVRSLQVTPRASVLGAGGTRDNT---SDTAAGVAASMALAARGPPPTEGHRYSVTSVQWYPLDTGLFVSGSTDGTVRVWDTNVFANAGTFDLGSNVHALALSAAMRTHSLVAVGTDDRRVRLCDLKSGGSSHLLTGHAEAVTTVAWSPTQEHLLAXXXXXXXXXXXXXXRSGTSACVMTLDQ------------------------------------------------YTDHRGHAPGMMGGATELAKAHNGWIVSVEFTPNGCYLLSAGTDKRLRLWNAYTGDNTLVNYAGTHNDKACGWKVKAIQTGSKGGDELRSGGGTMVVYPNGASGEVLLYPLMPQNRHRRRRKGAGTIGSVGRPVHSLRGHLDAVQSVVHRRDAEQIITGGADSLLLVFDCS 445 R L R G LR + + R+ + VEIK+ GPV LD+D E+R+LL D TV ++DL GA E+ P D ++GP + P A + A R V S HR+SV+ VQWYP+DTGLFVSG+ DG V+VWDTN FD V++ ++S H L+AVG+D + RLCD++SG +H L+GH+EAV+ AWSP E LLA RSG SAC+++LDQ Y H AP A++ A+AH G + S+ F P G +LL+AGTD RLRLW TG NT+ NY T N + + + G G + V +PN SG+VL++PL + GRP LRGH D VQ +R ++++T GAD L+L++ + Sbjct: 5 RALERRRAGVLRQRSTADKLRTSRVSQLDLDINVEIKSPHHGPVTWLDVDSAEERYLLTGGADCTVAVFDLDGAGEKRPSLASGDDNNSGP------RRHGPAAETVAARRRRPKVLREVGRTPRVPLSQXXXXXXXXXXXXHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPTTGQHHLIAVGSDSPQARLCDIRSGAFAHALSGHSEAVSACAWSPRSEFLLATGSADQTVRLWDIRRSGASACLISLDQHXXXXXXXXXXXXXXXXXXCGSGXXXXXXXXXXXXXXXXXXXXXXXRGYLKHIKLAP-HASRASKFARAHAGPVNSLCFAPEGLHLLTAGTDNRLRLWEVETGRNTMTNYLQTKNKRR---RPFGMAVGRPAGRRSET-----VFFPNDKSGDVLVFPLHTPD---------------GRPKGKLRGHFDPVQCCAYRPRTQEVVTCGADGLVLLWSAA 468
BLAST of NO14G01950 vs. NCBI_GenBank
Match: XP_004353363.1 (CSA protein [Acanthamoeba castellanii str. Neff] >ELR23835.1 CSA protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 196.8 bits (499), Expect = 1.700e-46 Identity = 137/446 (30.72%), Postives = 200/446 (44.84%), Query Frame = 0 Query: 25 ARRLRHVSPSARVEIKNGQRGPVNHLDLDPYEDRFLLVAAGDATVGLYDLGATERVPQDDDDGASTGPLLRVRSLQVTPRASVLGAGGTRDNTSDTAAGVAASMALAARGPPPTEGHRYSVTSVQWYPLDTGLFVSGSTDGTVRVWDTNVFANAGTFDLGSNVHALALSAAMRTHSLVAVGTDDRRVRLCDLKSGGSSHLLTGHAEAVTTVAWSPTQEHLLAXXXXXXXXXXXXXXRSGTSACVMTLDQYTDH---------RGHAPGMMGGATELAKAHNGWIVSVEFTPNGCYLLSAGTDKRLRLWNAYTGDNTLVNYAGTHNDKACGWKVKAIQTGSKGGDELRSGGGTMVVYPNGASGEVLLYPLMPQNRHRRRRKGAGTIGSVGRPVHSLRGHLDAVQSVVHRRDAEQIITGGADSLLLVFDCSRHDIQNSQCLDDEEGDK 462 ARR + S + EI + L +D E R+LL AGD T+ ++DL P+ R +TP + LA RG GH + V+S+ WY DTG+F SGS D V WDTN F++ V++++LS H+LVA G+ D++VRLCD +GGS+H L GH EA+ V WSPT E+LLA RSG C+++LDQ+ R GGA AH+ + S+ ++P+G +L S+G D ++ +WNA TG NTLVN+AG N KG S G ++ +PNG+ ++ H GR + LRGH D V V +++ +GG D+ LL C + ++ ++DE D+ Sbjct: 7 ARRAYDLDLSGKREITSANHAAFTSLAIDLVEARYLLAGAGDGTISVFDLHQFGGNPR--------------RRAAITP------------------------LFLAKRG-----GHTHGVSSIAWYTHDTGMFFSGSFDHKVNAWDTNAQRVVCQFEMPLPVYSISLSPIATRHALVAAGSGDQKVRLCDPMTGGSTHCLLGHREAILAVQWSPTNEYLLASASVDKTIRLWDIRRSG---CLLSLDQHNSQTALETNRTLRLKNVSAKGGAPTSVTAHDEPVTSLCWSPDGLFLYSSGKDNKIHMWNADTGRNTLVNFAGVKN------------AAEKGSQMAISSDGQVLYHPNGSD-------ILALEAH------------TGRTLSLLRGHFDKVNCCVFHPHLQELYSGGNDNQLL---CWVPSMDEAELVEDEATDE 372
BLAST of NO14G01950 vs. NCBI_GenBank
Match: XP_016607054.1 (hypothetical protein SPPG_05964 [Spizellomyces punctatus DAOM BR117] >KNC99014.1 hypothetical protein SPPG_05964 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 194.5 bits (493), Expect = 8.200e-46 Identity = 123/339 (36.28%), Postives = 172/339 (50.74%), Query Frame = 0 Query: 1 MMERLLAHRAEGRLRPPAFEAGVHARRLRHVSPSARVEIKNGQRGPVNHLDLDPYEDRFLLVAAGDATVGLYDLGATERVPQDDDDGASTGPLLRVRSLQVTPRASVLGAGGTRDNTSDTAAGVAASMALAARGPPPTEGHRYSVTSVQWYPLDTGLFVSGSTDGTVRVWDTNVFANAGTFDLGSNVHALALSAAMRTHSLVAVGTDDRRVRLCDLKSGGSSHLLTGHAEAVTTVAWSPTQEHLLAXXXXXXXXXXXXXXRSGTSACVMTLDQYTDHRGHAPGMMGGATELAKAHNGWIVSVEFTPNGCYLLSAGTDKRLRLWNAYTGDNTLVNYAGTH 340 M RLL R E + P E + R S + GP+N LD++ E R+LL + D T+ LYDL + VP D STG L+ P A L + +A R GH+YSVT V W+P DTGLF + S DGTV+VWDTNV + F++ ++V+ +S+ +H+L+A GT + VRLCD+++G +H L GH +V TV WSP E LLA ++ AC+++LDQ+ G G + AHNG + + FT +G YL+SAG D+ LRLW+ ++G NTLVNY G H Sbjct: 1 MTYRLLRSREENP-QLPKIELHWSSSRFLTTELSKTKGLAKVATGPINALDIEALEGRYLLAGSADTTIHLYDLEEWDTVPSGSDQ-TSTG-------LRRPPPARAL----------------SRPIATVER----RAGHQYSVTGVHWFPTDTGLFTTSSMDGTVKVWDTNVMQSVCAFNIENHVYVHEMSSVATSHNLIATGTAESPVRLCDMRTGAFTHSLMGHRGSVLTVRWSPRDEFLLASGSTDHTIRFWDIRKA--KACLISLDQH--ETGSRRREDNGDNDSTSAHNGHVNGLGFTSDGLYLISAGHDESLRLWDVFSGKNTLVNY-GPH 305
BLAST of NO14G01950 vs. NCBI_GenBank
Match: XP_002611101.1 (hypothetical protein BRAFLDRAFT_206058 [Branchiostoma floridae] >EEN67111.1 hypothetical protein BRAFLDRAFT_206058 [Branchiostoma floridae]) HSP 1 Score: 194.1 bits (492), Expect = 1.100e-45 Identity = 154/465 (33.12%), Postives = 205/465 (44.09%), Query Frame = 0 Query: 2 MERLLAHRAEGRLRPPAFEAGVHARRLRHVSPSARVEIKNGQRGPVNHLDLDPYEDRFLLVAAGDATVGLYDLGATERVPQDDDDGASTGPLLRVRSLQVTPRASVLGAGGTRDNTSDTAAGVAASMALAARGPPPTEGHRYSVTSVQWYPLDTGLFVSGSTDGTVRVWDTNVFANAGTFDLGSNVHALALSAAMRTHSLVAVGTDDRRVRLCDLKSGGSSHLLTGHAEAVTTVAWSPTQEHLLAXXXXXXXXXXXXXXRSGTSACVMTLDQYTDHRGHAPGMMGGATELAKAHNGWIVSVEFTPNGCYLLSAGTDKRLRLWNAYTGDNTLVNYAGTHNDKACGWKVKAIQ-TGSKGGDELRSGGGTMVVYPNGASGEVLLYPLMPQNRHRRRRKGAGTIGSVGRPVHSLRGHLDAVQSVVHRRDAEQIITGGADSLLLVF--DCSRHDIQNSQCLDDEEGDKSP 464 M L+ R G L P A RR + S ++K VN LDLDP E R+LL D + +YD +L TP S TA A+ G H+YSV +V+WYP DTGLF S S D T++VWDTN A F V++ A+S + H L+AV T V LCDLKSG S+H+L GH AV WSP +LLA RS S+ +M+LDQ H G + + AHNG + + FTP G +LLS GTD RLRLW+ TG NTLVNY K C K++Q T S+G +V P+ +S + ++ + G +H L GH + VQ V D +++ +GG+DS +LV+ D R + D EE K P Sbjct: 1 MLNFLSCRENGTLDPLALVRAETTRRTFSLELSKEQDVKRIHASGVNSLDLDPAESRYLLSGGADGVIAVYD----------------------THNLSGTP--------------SSTAE------AVCTVGRSHRHVHKYSVETVRWYPHDTGLFTSSSMDKTLKVWDTNALLPAEVFQFEGTVYSHAMSPVAKKHCLIAVATMTSIVTLCDLKSGSSTHILKGHRAAVKCARWSPRNPYLLA-TGSQDNKVLLWDVRSAKSS-LMSLDQ---HNGE---LATSTAAVNTAHNGHVNGLCFTPEGLHLLSFGTDHRLRLWDTATGRNTLVNYG-----KICNDSKKSVQFTVSRGSSP------DVVFVPDDSS--IAMFDVFG-----------------GTSLHRLVGHYNYVQCCVFNPDTQELYSGGSDSNILVWVPDLGRGE-------DYEESKKQP 378
BLAST of NO14G01950 vs. NCBI_GenBank
Match: XP_020763462.1 (DNA excision repair protein ERCC-8 isoform X1 [Odocoileus virginianus texanus]) HSP 1 Score: 194.1 bits (492), Expect = 1.100e-45 Identity = 132/436 (30.28%), Postives = 192/436 (44.04%), Query Frame = 0 Query: 6 LAHRAEGRLRPPAFEAGVHARRLRHVSPSARVEIKNGQRGPVNHLDLDPYEDRFLLVAAGDATVGLYDLGATERVPQDDDDGASTGPLLRVRSLQVTPRASVLGAGGTRDNTSDTAAGVAASMALAARGPPPTEGHRYSVTSVQWYPLDTGLFVSGSTDGTVRVWDTNVFANAGTFDLGSNVHALALSAAMRTHSLVAVGTDDRRVRLCDLKSGGSSHLLTGHAEAVTTVAWSPTQEHLLAXXXXXXXXXXXXXXRSGTSACVMTLDQYTDHRGHAPGMMGGATELAKAHNGWIVSVEFTPNGCYLLSAGTDKRLRLWNAYTGDNTLVNYAGTHNDKACGWKVKAIQTGSKGGDELRSGGGTMVVYPNGASGEVLLYPLMPQNRHRRRRKGAGTIGSVGRPVHSLRGHLDAVQSVVHRRDAEQIITGGADSLLLVF 442 L+ R G P RR+ + + +++ VN LD++P E R++L D + LYDL + R P A+ + G + H+YSV +VQWYP DTG+F S S D T++VWDTN A F+ V++ +S HSLVAVGT +V+LCDLKSG SH+L GH + + V+WSP EH+LA R+ S C++TLDQ+ + A A AHNG + + FT +G +LL+ GTD R+RLWN+ G+NTLVNY +ND G K + +G G T+ VY TI S G + L+GH +V V + + +++ +G D +L + Sbjct: 5 LSARQAGLEDPLRLRRAESTRRVLGLELNKDRDVERIHCSGVNTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQP------------------------------------------YYTCKAVCSIGRSHPDVHKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQIADVFNFEETVYSHHMSPVATKHSLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYEHILATASADSRAKLWDVRRA--SGCLITLDQHNGKKSQA------AESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVYNDSRKGLKF-TVSSGCSSEFVFVPYGSTIAVY---------------------------TIYS-GEQIIMLKGHYKSVDCCVFQSNFQELYSGSRDCNILAW 361
BLAST of NO14G01950 vs. NCBI_GenBank
Match: XP_019631468.1 (PREDICTED: DNA excision repair protein ERCC-8-like [Branchiostoma belcheri]) HSP 1 Score: 193.0 bits (489), Expect = 2.400e-45 Identity = 146/441 (33.11%), Postives = 198/441 (44.90%), Query Frame = 0 Query: 2 MERLLAHRAEGRLRPPAFEAGVHARRLRHVSPSARVEIKNGQRGPVNHLDLDPYEDRFLLVAAGDATVGLYDLGATERVPQDDDDGASTGPLLRVRSLQVTPRASVLGAGGTRDNTSDTAAGVAASMALAARGPPPTEGHRYSVTSVQWYPLDTGLFVSGSTDGTVRVWDTNVFANAGTFDLGSNVHALALSAAMRTHSLVAVGTDDRRVRLCDLKSGGSSHLLTGHAEAVTTVAWSPTQEHLLAXXXXXXXXXXXXXXRSGTSACVMTLDQYTDHRGHAPGMMGGATELAKAHNGWIVSVEFTPNGCYLLSAGTDKRLRLWNAYTGDNTLVNYAGTHNDKACGWKVKAIQ-TGSKGGDELRSGGGTMVVYPNGASGEVLLYPLMPQNRHRRRRKGAGTIGSVGRPVHSLRGHLDAVQSVVHRRDAEQIITGGADSLLLVF 442 M L+ R G L P A RR + S ++K VN LDLDP E R+LL D + +YD +L TP S TA A+ G H+YSV +V+WYP DTGLF S S D T++VWDTNV A F V++ A+S + H L+AV T V LCDLKSG S+H+L GH AV WSP +LLA RS S+ +M+LDQ H G + + AHNG + + FTP G +LLS GTD RLRLW+ TG NTLVNY N+ K++Q T S+G +V P+ +S + ++ + G +H L GH + VQ V + +++ +GG+DS +LV+ Sbjct: 1 MLNFLSCRENGTLDPVALVRAETTRRTFSLELSKEQDVKRIHASGVNSLDLDPVEARYLLSGGADGVIAIYD----------------------THNLSGTP--------------SSTAE------AVCTVGRSHRHVHKYSVETVRWYPHDTGLFTSSSMDKTLKVWDTNVLLPAEVFQFEGTVYSHAMSPVAKKHCLIAVATMTSIVTLCDLKSGSSTHILKGHRAAVKCARWSPRNPYLLA-TGSQDNKVLLWDVRSAKSS-LMSLDQ---HNGE---LATSTAAVNTAHNGHVNGLCFTPEGLHLLSFGTDHRLRLWDTATGRNTLVNYGKISNESK-----KSVQFTVSRGSSP------DVVFVPDDSS--IAMFDVFG-----------------GTSLHRLVGHYNYVQCCVFNPNTQELYSGGSDSNILVW 361
BLAST of NO14G01950 vs. NCBI_GenBank
Match: GAQ85546.1 (putative WD-40 repeat family protein [Klebsormidium nitens]) HSP 1 Score: 192.6 bits (488), Expect = 3.100e-45 Identity = 147/497 (29.58%), Postives = 209/497 (42.05%), Query Frame = 0 Query: 2 MERLLAHRAEGRLRPPAFEAGVHARRLRHVSPSARVEIKNGQRGPVNHLDLDPYEDRFLLVAAGDATVGLYDLGATERVPQDDDDGASTGPLLRVRSLQVTPRASVLGAGGTRDNTSDTAAGVAASMALAARGPPPTEG-HRYSVTSVQWYPLDTGLFVSGSTDGTVRVWDTNVFANAGTFDLGSNVHALALSAAMRTHSLVAVGTDDRRVRLCDLKSGGSSHLLTGHAEAVTTVAWSPTQEHLLAXXXXXXXXXXXXXXRSGTSACVMTLDQYTDHRGHAPGM------------------------------------MGGATELAKAHNGWIVSVEFTPNGCYLLSAGTDKRLRLWNAYTGDNTLVNYAGTHNDKACGWKVKAIQTGSKGGDELRSGGGTMVVYPNGASGEVLLYPLMPQNRHRRRRKGAGTIGSVGRPVHSLRGHLDAVQSVVHRRDAEQIITGGADSLLLVFDCSRHDIQNSQCLDDEEGDK 462 M + L R G +P A + RL + S EI +G R V L +D E R+LL A D ++ ++D + QD G + R ++ R TEG H+Y+V+SV WYP+DTGLFVSGS D TV+ WDTN TF L + V A+A+S TH+L+AVG+ D RVRLCD+ SGG +H L GH +AV V WS + E +L R+G C LDQ+ G P M A + AH+ + S++ TP+G YL S G D RLRLW+ TG+NTLVNY T G ++ S + V P+G+ + A + S G P +LRGH + V + +++ +GG D +LV++ ++ L+DE D+ Sbjct: 37 MWKHLQDRQTGSEKPQVTAARIAKSRLLALDLSTSKEISSGHRSGVTSLQVDNTEQRYLLSGASDGSLAVHDTQVPTKYEQD-------GTAVHERLFKIDKR---------------------------------TEGAHQYAVSSVSWYPIDTGLFVSGSFDDTVKCWDTNTLQVEMTFSLPAKVFAVAMSPVAVTHTLIAVGSGDTRVRLCDVSSGGFAHSLAGHRDAVWAVTWSLSSEFVLMTGGCDGAIRFWDIRRAG---CFKVLDQHKTQMGRRPPPRPQDTRTDPPNALQQREGRGPKRRGAPDRPQLLHPGMASALDRTSAHDAPVTSLQGTPDGQYLFSTGADSRLRLWDIETGNNTLVNYRTTRGKANRGTQIAV------------SPDSSHVYQPSGSVIQ------------------AFDVWS-GEPHATLRGHFEGVNCCTFQAHDQEMYSGGNDRQILVWE----PPAPAKVLEDEHADQ 455
BLAST of NO14G01950 vs. NCBI_GenBank
Match: XP_003782786.1 (DNA excision repair protein ERCC-8 isoform X1 [Otolemur garnettii]) HSP 1 Score: 192.2 bits (487), Expect = 4.100e-45 Identity = 129/436 (29.59%), Postives = 192/436 (44.04%), Query Frame = 0 Query: 6 LAHRAEGRLRPPAFEAGVHARRLRHVSPSARVEIKNGQRGPVNHLDLDPYEDRFLLVAAGDATVGLYDLGATERVPQDDDDGASTGPLLRVRSLQVTPRASVLGAGGTRDNTSDTAAGVAASMALAARGPPPTEGHRYSVTSVQWYPLDTGLFVSGSTDGTVRVWDTNVFANAGTFDLGSNVHALALSAAMRTHSLVAVGTDDRRVRLCDLKSGGSSHLLTGHAEAVTTVAWSPTQEHLLAXXXXXXXXXXXXXXRSGTSACVMTLDQYTDHRGHAPGMMGGATELAKAHNGWIVSVEFTPNGCYLLSAGTDKRLRLWNAYTGDNTLVNYAGTHNDKACGWKVKAIQTGSKGGDELRSGGGTMVVYPNGASGEVLLYPLMPQNRHRRRRKGAGTIGSVGRPVHSLRGHLDAVQSVVHRRDAEQIITGGADSLLLVF 442 L+ R G P RR+ + + +++ VN LD++P E R++L D + LYDL + R P AL + G + H+YSV +VQWYP DTG+F S S D T++VWDTN A ++ +++ +S HSLVAVGT +V+LCDLKSG SH+L GH + + V+WSP +++LA R+ S C++TLDQ+ + A A AHNG + + FT +G +LL+ GTD R+RLWN+ G+NTLVNY +ND G K + G G T+ VY T+ S G + L+GH +V V + + +++ +GG D +L + Sbjct: 5 LSARQAGLEDPLYLRRAESTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQP------------------------------------------YYTCKALCSIGRDHPDVHKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADIYNFEETIYSHHMSPIATKHSLVAVGTRGPKVQLCDLKSGACSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRA--SGCLITLDQHNGKKSQA------AESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVYNDSRKGLKF-TVSCGCSSEFVFIPYGSTIAVY---------------------------TVYS-GEQITMLKGHYKSVDCCVFQSNFQELYSGGRDCNILAW 361
BLAST of NO14G01950 vs. NCBI_GenBank
Match: XP_020043289.1 (DNA excision repair protein ERCC-8 isoform X2 [Castor canadensis]) HSP 1 Score: 192.2 bits (487), Expect = 4.100e-45 Identity = 132/441 (29.93%), Postives = 193/441 (43.76%), Query Frame = 0 Query: 2 MERLLAHRAEGRLRPPAFEAGVHARRLRHVSPSARVEIKNGQRGPVNHLDLDPYEDRFLLVAAGDATVGLYDLGATERVPQDDDDGASTGPLLRVRSLQVTPRASVLGAGGTRDNTSDTAAGVAASMALAARGPPPTEGHRYSVTSVQWYPLDTGLFVSGSTDGTVRVWDTNVFANAGTFDLGSNVHALALSAAMRTHSLVAVGTDDRRVRLCDLKSGGSSHLLTGHAEAVTTVAWSPTQEHLLAXXXXXXXXXXXXXXRSGTSACVMTLDQYTDHRGHAPGMMGGATELAK-AHNGWIVSVEFTPNGCYLLSAGTDKRLRLWNAYTGDNTLVNYAGTHNDKACGWKVKAIQTGSKGGDELRSGGGTMVVYPNGASGEVLLYPLMPQNRHRRRRKGAGTIGSVGRPVHSLRGHLDAVQSVVHRRDAEQIITGGADSLLLVF 442 M L+ R G P F RR+ + + +++ VN LD++P E R++L D + LYDL + R P A+ + G + H+YSV +VQWYP DTG+F S S D T++VWDTN A F V++ +S H LVAVGT +V+LCDLKSG SH+L GH + + V+WSP +++LA R+ S C++TLDQ+ G A E A AHNG + + +T +G +LL+ GTD R+RLWN+ G+NTLVNY ND G K + G G T+ +Y T+ S G + L+GH +V V + + +++ +GG DS +L + Sbjct: 1 MLSFLSSRQAGLEDPLRFRRAESTRRILSLELNKDRDVERIHSSGVNTLDVEPIEGRYMLSGGSDGVIVLYDLENSSRQP------------------------------------------YYTCKAVCSVGRNHPDVHKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFTFEETVYSHHMSPVSTKHCLVAVGTKGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRHDYILATASADSRVKLWDVRRA--SGCLITLDQHN-------GKKSQAVESANTAHNGKVNGLCYTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNDSRKGLKF-TVSCGCSSEFVFVPYGSTIAIY---------------------------TVYS-GELITMLKGHYKSVDCCVFQSNFQELYSGGRDSSILAW 361 The following BLAST results are available for this feature:
BLAST of NO14G01950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G01950 ID=NO14G01950|Name=NO14G01950|organism=Nannochloropsis oceanica|type=gene|length=3839bpback to top protein sequence of NO14G01950.1 >NO14G01950.1-protein ID=NO14G01950.1-protein|Name=NO14G01950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=526bpback to top Synonyms
Publications
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