NO14G01920, NO14G01920 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G01920 vs. NCBI_GenBank
Match: EWM24627.1 (Plastid lipid-associated protein/fibrillin conserved domain protein [Nannochloropsis gaditana]) HSP 1 Score: 356.3 bits (913), Expect = 8.200e-95 Identity = 173/243 (71.19%), Postives = 206/243 (84.77%), Query Frame = 0 Query: 11 MKTLLVLVLLGML-FEVESYRLLPAIRKRWRRRRPPPTVVLPQLDSFKLIPSQKTVQAQGWRDTLVSIGNELHRSSSLPTKAQKETIRSIALALETVQPTPTKAPALSPFNQGRWALLYTDAPGISSGRIGPFGLIKGRVFQEVDLTTRGYVNILEVSKPGQAPWLEAKLTAEFQVVDDTDWEVTFKDVVGMLRGKQVVKQVFSGVSRVWTHTYLDREGGVRIMRARRPEKRPEDAFLFVLVR 253 MK + ++V+L +L + YRLLPAI KRWRRRR PPTVVLP +DSF+LIP Q+ VQAQGWRD+LVSIG +L S LP+KAQK TIRSIA+ALETV+P PT+APALS QGRW+LLYTDAPGISSGRIGPFG+IKGRV QEV+L ++ Y NIL V+KPG PWLEA+LTA F V++DTDWEVTF+DVVG+LRGKQVV+QVFSGV R+WTHTYLD G VR+MRARRPE++P++AFLFV VR Sbjct: 16 MKKIFIIVILTLLQGSILGYRLLPAIGKRWRRRRQPPTVVLPSIDSFQLIPDQQKVQAQGWRDSLVSIGKQLSTSGILPSKAQKMTIRSIAVALETVKPMPTRAPALSSMVQGRWSLLYTDAPGISSGRIGPFGVIKGRVSQEVELASKAYTNILRVAKPGHEPWLEARLTASFDVLNDTDWEVTFEDVVGLLRGKQVVRQVFSGVQRIWTHTYLDPTGRVRVMRARRPERQPDEAFLFVFVR 258
BLAST of NO14G01920 vs. NCBI_GenBank
Match: XP_002499925.1 (predicted protein [Micromonas commoda] >ACO61183.1 predicted protein [Micromonas commoda]) HSP 1 Score: 86.3 bits (212), Expect = 1.600e-13 Identity = 54/150 (36.00%), Postives = 81/150 (54.00%), Query Frame = 0 Query: 89 TKAQKETIRSIALALETVQPTPTKAPALSPFNQGRWALLYTDAPGISSGRIGPFGLIKGRVFQEVDLTTRGYVNILEVSKPGQAPWLEAKLTAEFQVVDDTDWEVTFKDVVGMLRGKQVVKQVF-SGVSRVWTHTYLDREGGVRIMRARR 238 T AQ+ I LE + PT + +L+ +G W + Y++AP S+G +GPF KG +QE++L YVN L V WL A+L A++ VDDT W VTF+DV + G + + F +RVW H+++ R++RA R Sbjct: 17 TDAQRAAIEDAIARLEALNPTAVPSDSLA--LEGAWEVTYSNAPPPSNGSLGPF---KGTAYQEINLADGTYVNRLTVP---PNDWLGARLRADWTRVDDTLWLVTFRDVTVSVLGFDLFTKAFDEETTRVWEHSFVSETH--RVVRAAR 156
BLAST of NO14G01920 vs. NCBI_GenBank
Match: CBJ27539.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 82.8 bits (203), Expect = 1.800e-12 Identity = 51/143 (35.66%), Postives = 76/143 (53.15%), Query Frame = 0 Query: 110 PTKAPALSPFNQGRWALLYTDAPGISSGRIGPFGLIKGRVFQEVDLTTRGYVNILEVSKPGQAPWLEAKLTAEFQVVDDTDWEVTFKDVVGMLRGKQVVKQVFSGVSRVWTHTYLDREGGVRIMRARRPEKRPEDAFLFVLVR 253 PTK S G W L+YT PG S G++GPF G V QEVD+ YVN + + L +L A + VV+ + W+V FK + +L G+Q+VK +WT +YLD + +R++ AR E+ + ++VL R Sbjct: 99 PTKDITTSELATGTWDLIYTTTPGASGGKLGPF---IGEVQQEVDIAEGLYVNYVRLGP------LTGRLEATWDVVNKSQWKVVFKSIAFLLFGQQLVKNELDQAG-LWTLSYLDDD--MRVLTARSLER--DTGNVYVLAR 227
BLAST of NO14G01920 vs. NCBI_GenBank
Match: CBN77113.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 78.6 bits (192), Expect = 3.300e-11 Identity = 46/130 (35.38%), Postives = 73/130 (56.15%), Query Frame = 0 Query: 126 LLYTDAPGISSGRIGPFGLIKGRVFQEVDLTTRGYVNILEVSKPGQAPWLEAKLTAEFQVVDDTDWEVTFKDVVGMLRGKQVVKQVFSGV---SRVWTHTYLDREGGVRIMRARRPEKRPEDAFLFVLVR 253 +LY+ PG SSGR+GPF G VFQ++ + +NILE+ G + L L A+ +V+D ++W ++F V G +V ++ F R+W+ TYLD G RI+ R+ E++F+FV+ R Sbjct: 1 MLYSTVPGPSSGRLGPF---VGDVFQDIRPDEKRIINILEL---GPSWALRGALEADVEVLDGSNWAISFDVVYNNFAGVKVQEKKFDPAVTERRIWSMTYLD--DGFRILYGRQEAMSAEESFIFVMER 122
BLAST of NO14G01920 vs. NCBI_GenBank
Match: XP_003055229.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH60481.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 75.9 bits (185), Expect = 2.100e-10 Identity = 55/165 (33.33%), Postives = 83/165 (50.30%), Query Frame = 0 Query: 80 ELHRSSSLPTKAQKETIRSIALALETVQP-TPTKAPALSPFNQGRWALLYTDAPGISSGRIGPFGLIKGRVFQEVDLTTRGYVNILEVSKPGQAPWLEAKLTAEF-QVVDDTD---WEVTFKDV-VGMLRGK-QVVKQVFSGVSRVWTHTYLDREGGVRIMRARR 238 E R ++ A + + +I + ++ PT PA S GRW ++++ AP S+G +GPF KG FQE+ L YVN+L + WL A+L A F V++D+ W VTF V V + G + F +RVW T++D E R++RA R Sbjct: 85 ESMRDANRGLDASDDALAAIEAKIRALEALNPTSNPANSALVDGRWEVVFSTAPPPSNGSLGPF---KGTAFQEISLENGSYVNVLSIP---PNDWLGARLVATFAPVMNDSRGELWTVTFDAVAVTLFDGAFSPFAKTFKDTTRVWRTTFIDAE--TRVVRAAR 241
BLAST of NO14G01920 vs. NCBI_GenBank
Match: XP_005853904.1 (hypothetical protein NGA_0463700 [Nannochloropsis gaditana CCMP526] >EKU22458.1 hypothetical protein NGA_0463700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 75.9 bits (185), Expect = 2.100e-10 Identity = 48/163 (29.45%), Postives = 81/163 (49.69%), Query Frame = 0 Query: 92 QKETIRSIALALETVQPTPTKAPALSPFNQGRWALLYTDAPGISSGRIGPFGLIKGRVFQEVDLTTRGYVNILEVSKPGQAPWLEAKLTAEFQVVDDTDWEVTFKDVVGMLRGKQVV-KQVFSGVSRVWTHTYLDREGGVRIMRARRPEKRPEDAFLFVLVRR 254 + + + ++LA E ++ PTK A S G W L+YT G S+G++GPF G+V Q++D YVN + + +E L A ++V +W+V F+D+ + G +V K+ SG + W TY+D + + A E +P ++RR Sbjct: 85 ESDKAKILSLASELIKRNPTKNIATSDKVDGTWRLVYTSTSGGSAGKLGPF---VGQVLQKIDTAGGDYVNFVRLF----GGLVEGALVATWEVKGANEWKVIFQDITFRVFGIPLVDKKPLSGQAGQWKLTYVDEDLRILTAAALTNEGKPAKVSNIYVLRR 240
BLAST of NO14G01920 vs. NCBI_GenBank
Match: EWM22249.1 (harpin binding protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 75.9 bits (185), Expect = 2.100e-10 Identity = 48/163 (29.45%), Postives = 81/163 (49.69%), Query Frame = 0 Query: 92 QKETIRSIALALETVQPTPTKAPALSPFNQGRWALLYTDAPGISSGRIGPFGLIKGRVFQEVDLTTRGYVNILEVSKPGQAPWLEAKLTAEFQVVDDTDWEVTFKDVVGMLRGKQVV-KQVFSGVSRVWTHTYLDREGGVRIMRARRPEKRPEDAFLFVLVRR 254 + + + ++LA E ++ PTK A S G W L+YT G S+G++GPF G+V Q++D YVN + + +E L A ++V +W+V F+D+ + G +V K+ SG + W TY+D + + A E +P ++RR Sbjct: 96 ESDKAKILSLASELIKRNPTKNIATSDKVDGTWRLVYTSTSGGSAGKLGPF---VGQVLQKIDTAGGDYVNFVRLF----GGLVEGALVATWEVKGANEWKVIFQDITFRVFGIPLVDKKPLSGQAGQWKLTYVDEDLRILTAAALTNEGKPAKVSNIYVLRR 251
BLAST of NO14G01920 vs. NCBI_GenBank
Match: XP_005831175.1 (hypothetical protein GUITHDRAFT_109982 [Guillardia theta CCMP2712] >EKX44195.1 hypothetical protein GUITHDRAFT_109982 [Guillardia theta CCMP2712]) HSP 1 Score: 74.7 bits (182), Expect = 4.800e-10 Identity = 47/128 (36.72%), Postives = 64/128 (50.00%), Query Frame = 0 Query: 102 ALETVQPTPTKAPALSPFNQGRWALLYTDAPGISSGRIGPFGLIKGRVFQEVDLTTRGYVNILEVSKPGQAPWLEAKLTAEFQVVDDTDWEVTFKDVVGMLRGKQVVKQVFSGVSRVWTHTYLDREGG 230 A E + PT+ A SP G+W L+++ G SSG +GPF G VFQ++ L Y NILE+ ++EA L+A + V+ W V F D+ L G V K+ FS R LD GG Sbjct: 32 ATELAKLNPTQRQATSPMLDGKWRLVFSTTKGPSSGMLGPF---VGDVFQDIVLEQEKYFNILELG------FVEAVLSAHWDVMGQEKWRVFFDDIQFSLFGIPVFKKEFSSSQRDQVLEGLDTLGG 150
BLAST of NO14G01920 vs. NCBI_GenBank
Match: CEL91638.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 73.6 bits (179), Expect = 1.100e-9 Identity = 50/155 (32.26%), Postives = 80/155 (51.61%), Query Frame = 0 Query: 89 TKAQKETIRSIALALETVQPTPTKAPALSPFNQGRWALLYTDAPGISSGRIGPFGLIKGRVFQEVDLTTRGYVNILEVSKPGQAPWLEAKLTAEFQVVDDTDWEVTFKDVVGMLRGKQVVKQVFSGVSRVWTHTYLDREGGVRIMRARRPEKRPE 244 T A++E I S+ LE+ +P KA A S G W L+YT PG S+G++GPF G V Q +D+ + Y+N +++ ++A L A + V+ W V F+++ + G + K V W TYLD + RI+ AR ++P+ Sbjct: 90 TPAEREKILSLVKQLES--SSPIKAAAQSKRLNGLWRLVYTTTPGSSAGKLGPF---VGDVTQMIDMDSDVYINYVDIGP------VQAFLEASWDVLGPNRWRVKFQNIGFRVFGIPLAKNELKNVGD-WRMTYLDDD--YRILWARGSRQQPD 230
BLAST of NO14G01920 vs. NCBI_GenBank
Match: XP_022840033.1 (unnamed product [Ostreococcus tauri] >CEF99781.1 unnamed product [Ostreococcus tauri]) HSP 1 Score: 72.4 bits (176), Expect = 2.400e-9 Identity = 47/122 (38.52%), Postives = 67/122 (54.92%), Query Frame = 0 Query: 120 NQGRWALLYTDAPGISSGRIGPFGLIKGRVFQEVDLTTRGYVNILEVSKPGQAPWLEAKLTAEFQVV-DDTDWEVTFKDVVGMLRGKQVVKQVFSG---VSRVWTHTYLDREGGVRIMRARR 238 ++G W + YT+AP S+GR+G F G FQ VD T R Y N+L V WL +L A + V+ DD W TF+ V + + V+ + G V+RVW TY+D + VR++RA R Sbjct: 63 SEGVWRVAYTNAPAPSNGRLGVF---SGASFQVVDATRRRYSNVLSVPPEN---WLRCELRARWDVLEDDALWLATFESVEIKVFDRFVLGKKVWGEGEVTRVWRTTYVDDD--VRVVRAAR 176 The following BLAST results are available for this feature:
BLAST of NO14G01920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 12
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G01920 ID=NO14G01920|Name=NO14G01920|organism=Nannochloropsis oceanica|type=gene|length=3104bpback to top protein sequence of NO14G01920.1 >NO14G01920.1-protein ID=NO14G01920.1-protein|Name=NO14G01920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=265bpback to top Synonyms
Publications
|