NO14G01820, NO14G01820 (gene) Nannochloropsis oceanica

Overview
NameNO14G01820
Unique NameNO14G01820
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3645
Alignment locationchr14:559369..563013 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:559369..563013 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G01820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL140nonsL140Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR025ngnoR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01820.1NO14G01820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|647113gene_5751Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01820.1NO14G01820.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01820 ID=NO14G01820|Name=NO14G01820|organism=Nannochloropsis oceanica|type=gene|length=3645bp
GAGGGCGAAGCTTTCCAACAATAAAATGTTGCATATACGTCCCCCTATTC
TTGTCTGAGTTTTCCAAGCGACTTTGACAGGGTCCGTTCAATCAACGGCC
ACAGCAGCAATAGCAACAGCAGCAACAGCAGCAGTATTAACACTTCTTCC
GCTCCTGTGCTTACTCTTTATGCTCAACCTTGCGGCAGAACTAGCGCATG
TGATTTATTGTCGGCAAAAATTACTAGCACAGGATCATCAACGTGGCCAT
GCGCATAAGGGTTGTGGGACTCACGCCGGACATCACCATCGCAGGAGAAT
TCACGCGAGCCCAACCCACACGCAGACTGAGCAATTTTGAATCCGAAGAT
GTGAAATCTTCTATAAATCAGAAACGGCGAATTCCTCATCCATATCACCC
CGCTGTGGCTCATTAAATATTCCGCGGAGCTCCAGGCGCCTCTTGGGAGC
ACATGGGTTGCGGCAAAGGCGAGGTCTCACATCCCAAGCTCCCGCATCTG
CCACCTGGCCAGGAATTCCGACGACATGCACGAGTCTCCAGTGCAACTTG
TCTCTCTCTCATCATTTTTTTGATCTTAAAACCCTTCCATTCTCACGCTC
TCATAAACTAAGCACTTGCTCTTAATGCGGGCTTATATTTAATATACATA
TGTATATATATACTTCCATTCTCACGCTCCCATAATCTAAGCACTCGCTC
TGAGTGCGGGTTTATATTTTTATACATATGCTTCGATTCATCAGAAGGTA
GGCCGCGGCGACAGAGGAGAGGAGAGACAGCATAGTGCTGAGTACGGGGA
ACTGCTGCGGTGGCAGCAGCTGTGTCATGGGTTCTGCAATACTTATAGAA
GAAAATGTGCCGCTGGATGTTTTGAGCCAAGAAGAAAGGGCCTCGTGCAG
GGAGGGGGGTAGTGGGTCGTCGCCACAGACATGGGAGCATACTTCTCTCA
GCCTGCTCTTGTTTCCGCGCCTGACCATACCACGAACCATCTGACGCACC
GCCGTGCTGGCTATCACACCTAGAGCCATGAAGAAACTCACCTGTCCCTC
GTGTATCCTCGCTCTCTACATGCAAACACAGTGCGGGCTGCCTACCCGAG
AGGCTGCAGCGCCAGCAATGGCTATCGGCATCAGGCAACAAACTGTACCG
ATACAAGGCAAGTAAACAAGCTAGCAATACCACCATCAAGAAGGCACTCT
CCGTACTGCAGCATCGCAGCCATGGTGAACCGGAGCATCAGCTGCAAGCG
TTCCTGTCCCACCGATATGCCTGTTCCTGCTCCTATTCCTTCTGCTGCTG
CCCTCCCTTCTACTTTTGCGGCGGCTGATGCTACTGCAACTACTGCCGCT
TCTTCCTCTGTCATAGCGGCCGACAACGACCCCCGCATCAGGCACCTCCA
CGATGCCGCGGCAACCTTGAGCTCGATGGCCTTAGTAGATACAAACGACC
TGCGTGCTATTAGCATTCTGAACGAGGTAACGGCGGATGGCGAGCTAGAG
ATTCTGCTGGAAAACACGGCCCCCGAGCTGCTCGACGCCATTGCCGACGC
TTTGGACCGGTATAACGCTCCCATGCTGCACGTTTTGCAGGCTTGGCACA
AGAAGCAAAAATCTGCTTTGTCTCCAGCCTTCAACCCGTTTGGTCATGAA
AATGGACACGGACCACATGTGCAGCCGCACCCTGCAAAGAGCAATACCAT
CGATCGACCACCATACGCCAAAAACGCAAAGATTACACCTCCATGGCTGG
ACATCGCCGAACGTCACGTCACCCAGCAAGATCCCGGCCCGTTTGTGCTA
GGGCTTCTGTCTGTACTTCGTAACCTCTCTTACATCGTGGCAAACGAGGA
AATTATCGCCCGTCACACGCGCATCCTCACACATCTCGTCAGCCTCGTGC
CCTGCGCATACCAAGACGGCGACAGCGTCCCGACGGGTGGACGCTGGCCA
CAGAGCAGTGGCACCAAGAAAGTCAGGAAAGGGAATGGGGGCAAGATCGG
GACATGTGTTTTTGACTTACTTTTGGCGCTTTCTTCCCGATTGAACGTGG
TAGGCCTTGTGCTGGATGAGCACGAGCCGCTGGCAGCGGAGAGCGTGCCA
GAAGATAGCCTCATGCTATTAGCCCCTGCAAGAATACGTTCACAGTACAT
TCAATTCCATAACCTATCTCTCGAACAAGAAGACTTCACCAGGGTAGTCC
AGTCATTATTAAGGCTTTTGATGGACTTGTTGACTTATCCTGCCGCTGGT
GCTGCTTGCGCTGCTGCAACTGCTGGAGGTGCAGGAAATCGACAGGGTGT
CCATTGTTGCCTGGAACTCTTAGCCCGATTGATGACTGAACATGAGTCGA
ACGCTCTACTGGTCGCTAGGCTTGCTTCTCCTGATTTTCTAGTTCGTCTG
CATGAGTTATTTTATGTGCCTCTGCACGGATTGGACTCCATGGAAGGCCC
AGGGCCGGCTGCGACATTGCCCGCAGGAAAAAAACGCCTGCGATATGTAA
TGCTTGGTGGGAAGAAAGAGCAGCAACAGCAACAACACCAACAAAAGAAT
GGTGGTGGTGGTGAGATGGACGCCGAGGTACGGGGGTTGAGCTTAGAAGT
TCTTGCGGCACTGTGTTCTGTTTCAATTGCAACGACCATGGAAATGGATG
GAGAGACAGAAGAAGAGCTGAGAGAGGGCCGTATGGAGGGAGGATTCCGT
GACAATGGTAATGGCCAAAAAGATGTCATCGAACGTCTCTTAAAGCACGT
GCCTGGTTTAGTGCGTTCTCTGATCCTATTGCTTGATGTTTCGACCGCGG
CATCACTGGCCGGTCGTCTTTTGGCCACGCTGGCGAGGGGAGACGACAAA
GGCCGGGAAGCGCTAGAGAATCATAAACGGTTGCTGACATATTACGCTTT
CCGACCGGGGGGGGAGATTGCGGCGAAACTGTTGTGGTCTGTATTTCTGG
CGCCCGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAAGAGGGGGAGGAA
TAAGAGGATGAGATGGATCAGGGGGGGGAGTATTAGGAAGGAAACAGGTC
AAAGCTTGATAAAGATCTTTAGCATTTCTTTTTCTTCATTTCTTCTTGCT
TGTCTCCCGCTCTTTCTTACGAAGTGTTGTATAGTCCGCTTGAAACATTT
GGCACACCGAAGGCGTGTCTCGCTGCTACTACTGCCGCTACTTCTGATGA
TGATCTATATCTATGTGTCTGATTGTTGATCTTATTTATGTCTCTCGCTT
TCTCTCCTGATGAAGTCTACTTTATTGGGGGGTTCGTACGCTGAAGGAAG
TGTGTGTAGTGGTCGACGAGGATCCCTAGTGCTTTAACTCTCGCGTGTCC
ACCTTGCAAATGCCCAATCATAACTCCGCGTTTTTCTCTCTCACGATAAA
TGACCATTCGTTTTCAAATATCTGTCGCATCTGTGATCCAACGTCTCCTC
TTCTCCTTTTCATATCCTTTTCTGGGGCTTCCATTGAGGAGCGAGTCTTC
CTCTTCAATTTGTTCTGAAGTGATATATCACTCCGCATGCGAGCTCTGCG
CATTTTTTTCTCTTCTTCTCTCTCTTTCCATTCGCTTTCTTCTTGCTGCC
TCTTGCTGTGCTTCCTTCACAGCTTTCTCGTCGTCCTCGACATGG
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protein sequence of NO14G01820.1

>NO14G01820.1-protein ID=NO14G01820.1-protein|Name=NO14G01820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=594bp
MVNRSISCKRSCPTDMPVPAPIPSAAALPSTFAAADATATTAASSSVIAA
DNDPRIRHLHDAAATLSSMALVDTNDLRAISILNEVTADGELEILLENTA
PELLDAIADALDRYNAPMLHVLQAWHKKQKSALSPAFNPFGHENGHGPHV
QPHPAKSNTIDRPPYAKNAKITPPWLDIAERHVTQQDPGPFVLGLLSVLR
NLSYIVANEEIIARHTRILTHLVSLVPCAYQDGDSVPTGGRWPQSSGTKK
VRKGNGGKIGTCVFDLLLALSSRLNVVGLVLDEHEPLAAESVPEDSLMLL
APARIRSQYIQFHNLSLEQEDFTRVVQSLLRLLMDLLTYPAAGAACAAAT
AGGAGNRQGVHCCLELLARLMTEHESNALLVARLASPDFLVRLHELFYVP
LHGLDSMEGPGPAATLPAGKKRLRYVMLGGKKEQQQQQHQQKNGGGGEMD
AEVRGLSLEVLAALCSVSIATTMEMDGETEEELREGRMEGGFRDNGNGQK
DVIERLLKHVPGLVRSLILLLDVSTAASLAGRLLATLARGDDKGREALEN
HKRLLTYYAFRPGGEIAAKLLWSVFLAPEEEEEEEEEKEEGEE*
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Synonyms
Publications