NO14G01810, NO14G01810 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G01810 vs. NCBI_GenBank
Match: XP_005855539.1 (major facilitator superfamily, partial [Nannochloropsis gaditana CCMP526] >EKU20821.1 major facilitator superfamily, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 251.5 bits (641), Expect = 1.700e-63 Identity = 122/145 (84.14%), Postives = 132/145 (91.03%), Query Frame = 0 Query: 1 MSRDPRLGSTQTWWTNEIAFTFLFFLNLLNYIDRGIIPGASEEFSAFVSDSLDTNTPDLYVGLLQSAFIVGFSLAAICFGHVIHFVSPFKMVGVGLVVWILAAALSGFARQAGSYQLLCAARMLSGVGEAGFQCVAPPFILDLGG 146 MSRDPRLGSTQ WWTNE+AFTFLFFLNLLNYIDRGIIPGA+EEFS FV+ SL T++PDL+VGLLQSAFIVGFSLAAI FGHVIH+V+PFKMVGVGLV+WI+A ALSG A SY LLC ARMLSGVGEAGFQCVAPPFILDLGG Sbjct: 48 MSRDPRLGSTQAWWTNELAFTFLFFLNLLNYIDRGIIPGAAEEFSDFVAHSLGTSSPDLFVGLLQSAFIVGFSLAAIVFGHVIHYVAPFKMVGVGLVIWIIATALSGLAHHVASYYLLCIARMLSGVGEAGFQCVAPPFILDLGG 192
BLAST of NO14G01810 vs. NCBI_GenBank
Match: EWM24619.1 (spinster-like protein [Nannochloropsis gaditana]) HSP 1 Score: 251.5 bits (641), Expect = 1.700e-63 Identity = 122/145 (84.14%), Postives = 132/145 (91.03%), Query Frame = 0 Query: 1 MSRDPRLGSTQTWWTNEIAFTFLFFLNLLNYIDRGIIPGASEEFSAFVSDSLDTNTPDLYVGLLQSAFIVGFSLAAICFGHVIHFVSPFKMVGVGLVVWILAAALSGFARQAGSYQLLCAARMLSGVGEAGFQCVAPPFILDLGG 146 MSRDPRLGSTQ WWTNE+AFTFLFFLNLLNYIDRGIIPGA+EEFS FV+ SL T++PDL+VGLLQSAFIVGFSLAAI FGHVIH+V+PFKMVGVGLV+WI+A ALSG A SY LLC ARMLSGVGEAGFQCVAPPFILDLGG Sbjct: 48 MSRDPRLGSTQAWWTNELAFTFLFFLNLLNYIDRGIIPGAAEEFSDFVAHSLGTSSPDLFVGLLQSAFIVGFSLAAIVFGHVIHYVAPFKMVGVGLVIWIIATALSGLAHHVASYYLLCIARMLSGVGEAGFQCVAPPFILDLGG 192
BLAST of NO14G01810 vs. NCBI_GenBank
Match: XP_009040792.1 (hypothetical protein AURANDRAFT_38972, partial [Aureococcus anophagefferens] >EGB04540.1 hypothetical protein AURANDRAFT_38972, partial [Aureococcus anophagefferens]) HSP 1 Score: 129.4 bits (324), Expect = 9.900e-27 Identity = 75/134 (55.97%), Postives = 87/134 (64.93%), Query Frame = 0 Query: 16 NEIAFTFLFFL-NLLNYIDRGIIPGASEEFSAFVSDSLD---TNTPDLYVGLLQSAFIVGFSLAAICFGHVIHFVSPFKMVGVGLVVWILAAALSGFARQAGSYQLLCAARMLSGVGEAGFQCVAPPFILDLGG 146 NE A L + NL+NY+DRGIIPGA+ EF+ FV+ S + G LQSAFIVGFSL + GH+IH SPF M G GL+VWI AA ++G AR SY LL ARMLSGVGEAGF V PFI D GG Sbjct: 9 NEKAIMVLLIVTNLINYLDRGIIPGANGEFTDFVAKSRELGGKGGASAAFGALQSAFIVGFSLTCLGVGHLIHTRSPFGMCGRGLIVWIFAAVVAGLARSTQSYSLLLLARMLSGVGEAGFVTVGGPFIQDAGG 142
BLAST of NO14G01810 vs. NCBI_GenBank
Match: CBJ29989.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 125.9 bits (315), Expect = 1.100e-25 Identity = 62/123 (50.41%), Postives = 83/123 (67.48%), Query Frame = 0 Query: 20 FTFLFFLNLLNYIDRGIIPGASEEFSAFVSDSLDTNTPDLYVGLLQSAFIVGFSLAAICFGHVIHFVSPFKMVGVGLVVWILAAALSGFARQAGSYQLLCAARMLSGVGEAGFQCVAPPFILD 143 FT L +NL+NY+DRG+IPG SEEF+ F+ +L T+ PD+++G+LQS FI+GFS A F + SPF ++ GL +W AA +G A+ GSY +L AR+LSGVGEA F V PP I D Sbjct: 21 FTLLAVVNLVNYLDRGVIPGGSEEFNGFIQKTLHTDRPDVFLGILQSGFILGFSAACFVFPSLARRRSPFSLMAAGLGMWCGAAVFAGVAKPLGSYAVLLMARLLSGVGEASFVTVVPPLITD 143
BLAST of NO14G01810 vs. NCBI_GenBank
Match: OQR91600.1 (Major Facilitator Superfamily (MFS) [Achlya hypogyna]) HSP 1 Score: 125.9 bits (315), Expect = 1.100e-25 Identity = 63/140 (45.00%), Postives = 91/140 (65.00%), Query Frame = 0 Query: 5 PRLGSTQTWWTNEIAFTFLFFLNLLNYIDRGIIPGASEEFSAFVSDSLDTNT--PDLYVGLLQSAFIVGFSLAAICFGHVIHFVSPFKMVGVGLVVWILAAALSGFARQAGSYQLLCAARMLSGVGEAGFQCVAPPFILD 143 P S+ T W F +NLLNY+DRGIIPGA +F F+ +++T Y+GLL S+FI ++ + FG++ F+ PF++VGVGL+VW +A + G ARQA ++ +L A R+LSG+GE+ FQC+APPFI D Sbjct: 8 PTASSSTTTW----IFFLFCLINLLNYVDRGIIPGAPTQFQYFIKSTMNTTVGQESFYLGLLASSFIASYAGFILLFGYLSIFMKPFRLVGVGLLVWCVAVLICGAARQAHNFYVLLAGRILSGIGESSFQCIAPPFIDD 143
BLAST of NO14G01810 vs. NCBI_GenBank
Match: OQR98913.1 (Major Facilitator Superfamily (MFS) [Thraustotheca clavata]) HSP 1 Score: 125.9 bits (315), Expect = 1.100e-25 Identity = 63/128 (49.22%), Postives = 91/128 (71.09%), Query Frame = 0 Query: 19 AFTFLFF--LNLLNYIDRGIIPGASEEFSAFVSDSL--DTNTPDLYVGLLQSAFIVGFSLAAICFGHVIHFVSPFKMVGVGLVVWILAAALSGFARQAGSYQLLCAARMLSGVGEAGFQCVAPPFILD 143 ++ FL F +NLLNY+DRGIIPGA +F F+ +L D + +Y+GLL S+FI ++L + FG++ FV PF+++G+GL+VW +A L G A+ A S+ LL A R+LSG+GE+ FQC+APPFI D Sbjct: 5 SWLFLLFCGINLLNYVDRGIIPGAPTQFQYFIERTLHVDVSQEGVYLGLLASSFIASYALFIMLFGYLSIFVKPFRLIGIGLLVWCVAMLLCGLAKPAQSFGLLLAGRILSGIGESSFQCIAPPFIDD 132
BLAST of NO14G01810 vs. NCBI_GenBank
Match: ETI56623.1 (hypothetical protein F443_00912, partial [Phytophthora parasitica P1569] >ETM02856.1 hypothetical protein L917_00811, partial [Phytophthora parasitica] >ETM56093.1 hypothetical protein L914_00842, partial [Phytophthora parasitica] >ETP54408.1 hypothetical protein F442_00866, partial [Phytophthora parasitica P10297]) HSP 1 Score: 123.2 bits (308), Expect = 7.100e-25 Identity = 64/143 (44.76%), Postives = 92/143 (64.34%), Query Frame = 0 Query: 1 MSRDP-RLGSTQTWWTNEIAFTFLFFLNLLNYIDRGIIPGASEEFSAFVSDSLDTNT--PDLYVGLLQSAFIVGFSLAAICFGHVIHFVSPFKMVGVGLVVWILAAALSGFARQAGSYQLLCAARMLSGVGEAGFQCVAPPFI 141 +S DP ST + A L +NL+NYIDRGIIPGA E+F+ F++D+L + +Y GLL SAFI +S+ ++ FG+ PF+++ +G+ VW++A A+ G A+ A SY +L A R++SGVGEA FQC A PFI Sbjct: 63 LSSDPDSASSTMVQVGKQGAIVLLCLINLINYIDRGIIPGAPEKFNQFITDTLGVSVLRQSVYFGLLTSAFIASYSIFSMVFGYFALTHRPFRIIALGMTVWVVAVAICGMAQAAESYYVLIAGRLISGVGEASFQCTATPFI 205
BLAST of NO14G01810 vs. NCBI_GenBank
Match: XP_008890519.1 (hypothetical protein PPTG_00775 [Phytophthora parasitica INRA-310] >ETN24455.1 hypothetical protein PPTG_00775 [Phytophthora parasitica INRA-310] >ETO85430.1 hypothetical protein F444_00919 [Phytophthora parasitica P1976]) HSP 1 Score: 123.2 bits (308), Expect = 7.100e-25 Identity = 64/143 (44.76%), Postives = 92/143 (64.34%), Query Frame = 0 Query: 1 MSRDP-RLGSTQTWWTNEIAFTFLFFLNLLNYIDRGIIPGASEEFSAFVSDSLDTNT--PDLYVGLLQSAFIVGFSLAAICFGHVIHFVSPFKMVGVGLVVWILAAALSGFARQAGSYQLLCAARMLSGVGEAGFQCVAPPFI 141 +S DP ST + A L +NL+NYIDRGIIPGA E+F+ F++D+L + +Y GLL SAFI +S+ ++ FG+ PF+++ +G+ VW++A A+ G A+ A SY +L A R++SGVGEA FQC A PFI Sbjct: 57 LSSDPDSASSTMVQVGKQGAIVLLCLINLINYIDRGIIPGAPEKFNQFITDTLGVSVLRQSVYFGLLTSAFIASYSIFSMVFGYFALTHRPFRIIALGMTVWVVAVAICGMAQAAESYYVLIAGRLISGVGEASFQCTATPFI 199
BLAST of NO14G01810 vs. NCBI_GenBank
Match: KUF81920.1 (Major Facilitator Superfamily (MFS) [Phytophthora nicotianae] >KUF98896.1 Structural maintenance of chromosomes protein 5 [Phytophthora nicotianae]) HSP 1 Score: 123.2 bits (308), Expect = 7.100e-25 Identity = 64/143 (44.76%), Postives = 92/143 (64.34%), Query Frame = 0 Query: 1 MSRDP-RLGSTQTWWTNEIAFTFLFFLNLLNYIDRGIIPGASEEFSAFVSDSLDTNT--PDLYVGLLQSAFIVGFSLAAICFGHVIHFVSPFKMVGVGLVVWILAAALSGFARQAGSYQLLCAARMLSGVGEAGFQCVAPPFI 141 +S DP ST + A L +NL+NYIDRGIIPGA E+F+ F++D+L + +Y GLL SAFI +S+ ++ FG+ PF+++ +G+ VW++A A+ G A+ A SY +L A R++SGVGEA FQC A PFI Sbjct: 49 LSSDPDSASSTMVQVGKQGAIVLLCLINLINYIDRGIIPGAPEKFNQFITDTLGVSVLRQSVYFGLLTSAFIASYSIFSMVFGYFALTHRPFRIIALGMTVWVVAVAICGMAQAAESYYVLIAGRLISGVGEASFQCTATPFI 191
BLAST of NO14G01810 vs. NCBI_GenBank
Match: KUF96166.1 (Major Facilitator Superfamily (MFS) [Phytophthora nicotianae]) HSP 1 Score: 123.2 bits (308), Expect = 7.100e-25 Identity = 64/143 (44.76%), Postives = 92/143 (64.34%), Query Frame = 0 Query: 1 MSRDP-RLGSTQTWWTNEIAFTFLFFLNLLNYIDRGIIPGASEEFSAFVSDSLDTNT--PDLYVGLLQSAFIVGFSLAAICFGHVIHFVSPFKMVGVGLVVWILAAALSGFARQAGSYQLLCAARMLSGVGEAGFQCVAPPFI 141 +S DP ST + A L +NL+NYIDRGIIPGA E+F+ F++D+L + +Y GLL SAFI +S+ ++ FG+ PF+++ +G+ VW++A A+ G A+ A SY +L A R++SGVGEA FQC A PFI Sbjct: 49 LSSDPDSASSTMVQVGKQGAIVLLCLINLINYIDRGIIPGAPEKFNQFITDTLGVSVLRQSVYFGLLTSAFIASYSIFSMVFGYFALTHRPFRIIALGMTVWVVAVAICGMAQAAESYYVLIAGRLISGVGEASFQCTATPFI 191 The following BLAST results are available for this feature:
BLAST of NO14G01810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G01810 ID=NO14G01810|Name=NO14G01810|organism=Nannochloropsis oceanica|type=gene|length=483bpback to top protein sequence of NO14G01810.1 >NO14G01810.1-protein ID=NO14G01810.1-protein|Name=NO14G01810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=161bpback to top Synonyms
Publications
|