NO14G01790, NO14G01790 (gene) Nannochloropsis oceanica

Overview
NameNO14G01790
Unique NameNO14G01790
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4392
Alignment locationchr14:551653..556044 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:551653..556044 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G01790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL140nonsL140Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR025ngnoR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002405NSK002405Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01790.1NO14G01790.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590199gene_5749Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01790.1NO14G01790.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01790 ID=NO14G01790|Name=NO14G01790|organism=Nannochloropsis oceanica|type=gene|length=4392bp
CTTGTTCTTTGCCGCCATTTCGCTGAAGCCCTTGTGCCCGTGTCCGGGTG
AAGAGATGAGGCGTAGGAGCATATTTCCATTCAAATTTGGTGGTTTGGAT
TACCAGTGGGTGATAGATGTAGGGTCGAGGGTGGGAAGTGGAGGGTTCAG
AGGTCGAGCAGACAGGTCCTGCCAGGCTGCCTCCCTTACTCCTTTTCTGT
GTCTGTGTCTACTGCCTATCACATTTTCTTGCCCTCGCCCTGCACTAGGG
ATTAACAGCGCTACTCTGAGCTCCGCAGACACTTGTGGAAATTAACACTG
CGTCGGAAAACACAAGGCCCCTGATTTACTCTGTCTACGCTGCGCCTTTC
CCAATTAATCACCACCCTTCCTTCTTCCCACACCTATCACAGGCCACAAT
GGAGCGCGAAGACCACAGTGGCAACCAATCTTTTCCGTCACCGACGGCAG
CGGTACATATTTTAGATGTCCACGAGACGGCGGAGCGGTCCGCAGAGCTG
GAACAGCTTTTGCGAAATGTGCCCTTTGAGGGCGAGGAGGCCTCCTTTTC
CCGCCAGCAGCAGCAGCGGTACCACCATGAGCAGCAGCAGCAGCAGCAGT
ACGAGGGACAACAAAATGAAAACCACGAAAAGAGAGGCACAACATTCGTT
TCTGAGGCCGATTTGCCCATGCCCCGCATTTCCATTTCTACGTCGCCTTA
TGATCACGACGACGAGAAATGGGAGAAGGATGAGGAAAAGGAGGATGAAG
ACAACGGAGAAGAAAAAGAAGACGACAGAGAAAAGAAAGAAGAAATAGGA
CAAGAAGAAGAAGGAGAAGAAGGAGAAGAAGGGGAAGAAGGGGAAGTTGT
GTCGTTCATTGTCCGCAAGGCTCCGCGGGAGGCCACTGTAGCTGGTAATG
AAGAGGATGAGGATGAGGACGATGACGACCATTACTTGATCAGTAGTAGT
AGTAGCAACAGCAGTGGAAGTGATACCAGCCACTACTATGAAGAGGAGGA
ATCTTACGGCCGCAACAATGAGAAAGACGAAGACGAGGGAGGGGGAATGG
ATAACGACGATGCGGCTTTCCACACACCTCGCACCTCCATGAAGGGCGCC
TATGACGGCAGCAGGCAATTACACAGTCTTTCGGCTGATTGCTCCTCGAA
AAAGCAGCTTTTCAGACATGCCCCTCCCACCATCCAAGAAGAGGACGACA
CCTACTTCGACAACGAAGACGGAAACGGCAGCGAACAAAGCGAAAGCCCA
CCATCCATGCCCTCCTCCCCTTCTTCATCCTCCTTGCCCTTTGTTCTCCC
CACCCACCTCCCCACGGACCCGGCAGAGCTCCAACTAATCGTGTCCGAAC
TTGCCATTGTCTCTCAAGCCTCCGAAGCAGAACGGCAACACCTCCTTCTC
CAAGTCCGCGCCCTCCGATGTGAGGAAAGTCGGTTGCTTGTCCAGGTACA
GGGCTTGGCCGCTCGAGAAAAAGAGCTCGAGGAACACCTGCTGCTGCTTT
CGCAAGTCCAGCACAGCGAGGGCAGCTCTACTCAGCAACAGCAGGGCCAG
GGAAGTGGTGGCATAGCCGGGGTGACTTTGAATTTGCTGAGGGGGCAGAT
GCTGGAGTCGGCTCGCTTGGAGATGGCGGAGGTGAAGGCAGCATTAGAGG
AAGCAAGACGAAACAATCTCCGTTTACTCGAAGAGAAGAACATGAGCAAC
AAAGAGTCTGAAACAATGGTTGATGCCCTAAAAGAAGAAATCTCGCGTCT
AGCAACCCAACTGGCGAGCAAGACGATGCTTGCCTCTGCGAGTAAGAGGG
AAGGGAAGGAGTGGGAGGCTCGCGCGCAGGCTGAGGCGTTGAGGGCAGAT
GCCTTGGTAGAAGAGATGAGGAAACTGAGGGCAGATTTACGGGGAGCTGA
GAGGAAGGTGATGGAGAAGGACAGTAAGAGGTATGCAGCGGAATCTAGAC
TGGAGGAAGCGGAGGGGCGGGGGGAAGGTTTGGAGAGGCGGTTGCAGCAG
ACACAGGGGGAGCTGCTGGAGGCACAGGCGCAGTTGAGAAGCTTGGCGGG
AGAGCTTGATGTGCAACGACGGGCAAAGGGAGTGGAGGATGCGAGGCAGG
TGTTGGCTGGGCAGATGGATGCTTTGATAAGAGAACATCGGTCGGAGATA
GCGGCGATGGAGGAGGAGGTGGAGCGGCTAGTGGCGGAGCTTGAGTTGGT
TAGGGGGCAGGGTGATGCTGCTGCCGCTGAGAAACAGGAAAAGAGAGAGG
AGGGAGGAGAGATGACGATGATGGTGATGGAGACGTCTGTGCGCTCTTCT
CCTTGTGATAGTAGTAATGGTGGGGCCGATCAACACACGGGAGACTCGCT
TCTTTCCCCCTCTCCATTTGATCTGGAGAGGGGTTTGGATGACCGAGCAT
TACTATCGCAGCGAAAGAGACACCAGCACCAGACTGACCTGAGTGAATTT
TTAGGAGAAATAAGCGAAGAGTTTGGAGAGGGGGAGAACAAGGTGGAGGG
GGGAGAAATTGCCGGGGAGCGTTCCCACTGGGCATCATCTTTTTCGGCCG
AGGAAGGGTTTAGAGGAGAAGTGGATGGATTTAGGGTACAGGAGGAGCAG
CAGCAGATGCATGGAGAAAGGGGGGGGGGCAAGCAATGTCAGCGGCACCA
GCACTTTTCCAATCAGCCAGAACTGGAGCTTCAGTTTTGGAAAGAGAAGG
CTTGTAAATTGCAGAAGGAATGTAACGAGCTTCGGAATTCTACGGCCGTA
GCTCGGGCACTTGATACAACTTCTGCTGCTGCTAGTGGTGTCGACGCTGA
CCCACAGGCGGTTAATGGCTTGCGGCGACGTATCCTAGAAGAGGAAGCCT
TGCGCATTGCACAAGCAAAAAAAATGCGTGAGTTAGCAGCCAAAATTGGC
GCGGGAGACGTAGATCTGGGTGGAGAAGGATTCCGACTCAGTGAGAAAGA
GAGAGAGGGTGAGGGGGGGATGGAGCTTTCACTGGGCATGGAAGAAGTCT
TGGACGCCGTGTCCCGGTGGGCGGCGTTGTGGAAGGCGAGGGCATGGGAG
GAAGTTAAGGCGGAGGTGCGGGAGTTGGAGGAATTGCGACGATATGATGA
TGCCAGCAGCGGCAGCAACACCTTCACTATCAGTCGCGTGGATGGATGGA
CACAAACGAATAGTAATGATAGGGAGGACGGTGATGAGGGAGATGTCGCA
TCGTCGTCGTGGGCATTGCAACAGCATCAACAGCAGTTAATCTGGCAGCA
TGAGAAGGAAGTTGCGCAGTGGCAGGCGAGGGTGACGGGCCTCGAGGATG
ACTTGCAGCAACAGCGTCGATCGATTCAAGATATTATAGAGGGAGCGCGC
GTGAAGCAAGAGAAGCATCAGCAGGCGTTGGAAAAAATTGAAACAGCGTA
TGAGAAAGAGAAGGAACGAGCGACTGCTGCTGTAGCTGCTGCTGCTGGAC
TTGTACAGGCCAGGGTGCGGCGGGAGGAAGAGCAAGATGAAGGGCAGGAG
GCCCGGGCGACAAAAAGAGCTGTGGTGATGGAGGAGGCGCTGAGTGCGGC
AAAGTTGGAGTGGGCACAGGAGGAGCGACAGCGGCTGCAGCATGTTTACA
GTAAGTTTGATCAGGAGAAAGCGGTGAAGGAGCAGCGGTGGAGGGAGAAA
CTGCAAGAAGTTGGGGCTAAAGTTCAATTTTTGCAGGAGACGTTCAAGAA
GATGAGTGCGAAGACAAAGGAGAAGGAGAAGGAAAACATGCAGGTGGCTC
AGGATCTGTTGGATAAGGAATCAAGGGAGGAGGAATTGAGGGCGCGTTTA
GAGAGGGTGGAAAGGGAGGTGCTGTTGAAAGATGTGAAGGTACGAGAATT
GGCGGAGACCCTGCGGAGGCAACAGAAGGAGACTATGGCGAGAGCGATGG
CTGCGAGTCAGGCTACGGCGGCAGATATGGAGAAGGTGAAGAAGCAGTTA
AGCGTAGAGCATGAAAAGGAGATTACTGTAGTGTTGACGAGTGTTCGAAA
GCACTTACGGGAAAAGTATAAAGCGAAGATGTCGGTGATGCAGCAGGCGT
GGGAGGATGAGAAGCGGGCCATTTTATCTCACCAGTATAGCGGGAGCAGC
CGGAAAAAGTCAGCTGGTGCAGCTGCTGCCTCTGTCTCTGGGGGCAGAGC
CAGGCATGCCTCGTCGCGGAAGATCCTCGCAATTAAAGAAGAAAAAGAGA
ATAGGGAAGAATAACTAAAAAGTAACGATGCATATTTTCCACTCAAAAAA
AAGAAAGAAAAACATGGAGAGAGAGAGGGAGAGAGAAAGACAGAGAGAGA
GAGATGTGTGTACATTAATATGATAACAACCACTTAAGCAAGTGGAACGA
CGAACGATACGAATCATCGAATGTAAGCGGAAGCACAAAAAG
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protein sequence of NO14G01790.1

>NO14G01790.1-protein ID=NO14G01790.1-protein|Name=NO14G01790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1272bp
MEREDHSGNQSFPSPTAAVHILDVHETAERSAELEQLLRNVPFEGEEASF
SRQQQQRYHHEQQQQQQYEGQQNENHEKRGTTFVSEADLPMPRISISTSP
YDHDDEKWEKDEEKEDEDNGEEKEDDREKKEEIGQEEEGEEGEEGEEGEV
VSFIVRKAPREATVAGNEEDEDEDDDDHYLISSSSSNSSGSDTSHYYEEE
ESYGRNNEKDEDEGGGMDNDDAAFHTPRTSMKGAYDGSRQLHSLSADCSS
KKQLFRHAPPTIQEEDDTYFDNEDGNGSEQSESPPSMPSSPSSSSLPFVL
PTHLPTDPAELQLIVSELAIVSQASEAERQHLLLQVRALRCEESRLLVQV
QGLAAREKELEEHLLLLSQVQHSEGSSTQQQQGQGSGGIAGVTLNLLRGQ
MLESARLEMAEVKAALEEARRNNLRLLEEKNMSNKESETMVDALKEEISR
LATQLASKTMLASASKREGKEWEARAQAEALRADALVEEMRKLRADLRGA
ERKVMEKDSKRYAAESRLEEAEGRGEGLERRLQQTQGELLEAQAQLRSLA
GELDVQRRAKGVEDARQVLAGQMDALIREHRSEIAAMEEEVERLVAELEL
VRGQGDAAAAEKQEKREEGGEMTMMVMETSVRSSPCDSSNGGADQHTGDS
LLSPSPFDLERGLDDRALLSQRKRHQHQTDLSEFLGEISEEFGEGENKVE
GGEIAGERSHWASSFSAEEGFRGEVDGFRVQEEQQQMHGERGGGKQCQRH
QHFSNQPELELQFWKEKACKLQKECNELRNSTAVARALDTTSAAASGVDA
DPQAVNGLRRRILEEEALRIAQAKKMRELAAKIGAGDVDLGGEGFRLSEK
EREGEGGMELSLGMEEVLDAVSRWAALWKARAWEEVKAEVRELEELRRYD
DASSGSNTFTISRVDGWTQTNSNDREDGDEGDVASSSWALQQHQQQLIWQ
HEKEVAQWQARVTGLEDDLQQQRRSIQDIIEGARVKQEKHQQALEKIETA
YEKEKERATAAVAAAAGLVQARVRREEEQDEGQEARATKRAVVMEEALSA
AKLEWAQEERQRLQHVYSKFDQEKAVKEQRWREKLQEVGAKVQFLQETFK
KMSAKTKEKEKENMQVAQDLLDKESREEELRARLERVEREVLLKDVKVRE
LAETLRRQQKETMARAMAASQATAADMEKVKKQLSVEHEKEITVVLTSVR
KHLREKYKAKMSVMQQAWEDEKRAILSHQYSGSSRKKSAGAAAASVSGGR
ARHASSRKILAIKEEKENREE*
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Synonyms
Publications