NO14G01740, NO14G01740 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G01740 vs. NCBI_GenBank
Match: EWM24604.1 (hypothetical protein Naga_100171g10 [Nannochloropsis gaditana]) HSP 1 Score: 921.0 bits (2379), Expect = 2.800e-264 Identity = 471/784 (60.08%), Postives = 564/784 (71.94%), Query Frame = 0 Query: 98 RISSSIRLSTFFGVVFLVELLLLVYIKYSSLP-PPTPDTGHMLALGSFASGSAAADSVSSTQDVSNTSTSTVPYVPPRLARPLTVACLSSQRTVSTTAFNLVRVLMERVDPNSISGWEHDVIGSKPGERIQGVLPKVHGKVSMVYKSHAGGAEHHKHADFFVVTYRDPYEVICSMGRMFLPKIFRDNQKAVGKCRKMAENEAGIRYWAGGREGEKPQAQTQAVHINSEALKSMEGMVEVVKLLMDKWGVVGGDLDPRSVAMEVLELESPPEGVFAVANPRSELHPHHITEGEAEGGGGCGVLKSVLEEDEICRAWHDSFEAMFPLGSSAIFDERSPRAGLQRARKP------RVVAENEKGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGFNDITVEMWKCIQFALDTDRTLILGYENYNPVSPPWTPYFTLNQEGLPNLRIITPFQAATALNERNRRVSVFPSRLTNDLDPLLGPRPSHGHAPEGLDPLQPFPFIYSELKHLKFRFDGEYDEDVVVFHRQGNVGSGLDLLRNMRFSLEIRRTFLERWSKLSKPYIALHLRRTDKSCSDMKLEKILKALHRLGKSGLVPEGPVYVASDHPELPDNFREELEKTQAREVVSFTYHPPIHEQRNAKKEDPYLQRQKEHERHSLGLEGLHLHDDLSPEEKHQTNLDAFVDLLLLAMAQELVTSCGGYSHLARELHEDPAVVLSLLSLPKPRPGENMDALLEAAAA 875 R+++ R++ FFGVV LVEL+ LV IK+S+LP P PDTGHM A + + S ++ + T+PY PPRL PLTVACLSSQRTVSTTAFNLVR+LMERVD NSISGWEHDV+GS+P ER++ +LPKVHGKVS VYKSHAGGAEHH+HADF VVTYRDPYE++CSMGRMF PKIFR KAV KCRKMA NEAGI+ WA GREG T+++HINS+ LKS EGM EVV+LLM+KWGV GG LDPRS+ EV++LESPPEGVF+VANPRSELHPHHIT G + G C VLK VL +D++CRAWHD++ AMFP GS +I DERS A ++ AR+ ++ + R NGG NDITVEMWKCI+FA T R L+L +ENYNPV+ PWTPYFTL E +P LR +TP+QAATA+N R R VSVFPSRL + LDPLLGP+P+ G +PEGLDP QPFPF + +LKHLKFRF+ Y +DVVVFHRQGNVGSG+ LR+++F+ IR TFLERWSKL KPY+ALHLRRTDKSCSD K+E++L+ LHR+G S PEGP+YVASDHPELP++FREELE+ Q R+VVSFTYHPP+HEQRNA EDP Q+ KE RHSLG+EGLHLHDDLSP+EKHQTN+DAFVDLLLLAM++EL+TSCGGYSHLARELH++ VV S+L LP P P +++D LLEAAAA Sbjct: 19 RMTTVSRMTIFFGVVLLVELVTLVCIKHSTLPRDPAPDTGHMFAHAPESQKEGFSRSQEERRE-TMAINETLPYEPPRLPSPLTVACLSSQRTVSTTAFNLVRILMERVDANSISGWEHDVVGSRPNERLEDILPKVHGKVSTVYKSHAGGAEHHQHADFVVVTYRDPYEIMCSMGRMFQPKIFRSEHKAVEKCRKMARNEAGIKDWA-GREG------TRSLHINSDVLKSAEGMTEVVRLLMEKWGVQGGSLDPRSITREVMDLESPPEGVFSVANPRSELHPHHIT-GSGDTEGDCDVLKEVLAQDQVCRAWHDTYAAMFPEGSPSILDERSAHAAVEEARRTLESGGFQIHNGDTGNARPSHNAKRERLASKEARSHIRRHQQGRGAWEADDRSGTGGPDKESHSQISAGEDAYMDVHASSETAFPSDKYFFCLLNGGLNDITVEMWKCIEFARTTQRVLVLAHENYNPVAAPWTPYFTL--ETIPGLRTMTPYQAATAINHRGRAVSVFPSRLQHHLDPLLGPKPAQGDSPEGLDPRQPFPFKFEKLKHLKFRFENTYHQDVVVFHRQGNVGSGVVALRHIKFAESIRSTFLERWSKLEKPYVALHLRRTDKSCSDEKMERLLQVLHRMGTSDFWPEGPIYVASDHPELPEDFREELEERQKRQVVSFTYHPPVHEQRNALHEDPDEQKMKEMRRHSLGIEGLHLHDDLSPKEKHQTNIDAFVDLLLLAMSEELLTSCGGYSHLARELHQNQDVVFSVLGLPAPGPNDDLDMLLEAAAA 791
BLAST of NO14G01740 vs. NCBI_GenBank
Match: EWM24985.1 (hypothetical protein Naga_100122g18 [Nannochloropsis gaditana]) HSP 1 Score: 231.5 bits (589), Expect = 1.000e-56 Identity = 128/357 (35.85%), Postives = 207/357 (57.98%), Query Frame = 0 Query: 531 GGFNDITVEMWKCIQFALDTDRTLILGYENYNPVSPPWTPYFTLNQEGLPNLRIITPFQAATALNERNRRVSVFPSRLTNDLDPLLGPRPSHGHAPEGLDPLQPFPFIYSELKHLKFRFDGEYDEDVVVFHRQGNVGSGLDLLRNMRFSLEIRRTFLERWSKLSKPYIALHLRRTDKSCSDMKLEKILKALHRLGKSGLVPEGPVYVASDHPELPDNFREELEKTQAREVVSFTYHPPIHEQRNAKKEDPYLQRQK--------EHERHSLGLEG-------LHLHDDLSPEEKHQTNLDAFVDLLLLAMAQELVTSCGGYSHLARELHEDPAVVLSLLSLPKPRPGENMDALLEAA 873 GGFNDI V++W+C+++A+ T+R +ILGYENY PV PP+ YF L + +P L +++ ++AA +R R R+T L G+ E D PF + + ++ F + Y + ++V+H++GN G+ +R++ FS E++RTFL RW ++SKPY+ +H+R TD+ C K ++++ + L + + P+Y+A+D+PE +R+E E Q R++ SFTY P E+P R+ + + + GL G LHL+ L EEKHQTN+D FVDLLLLA ++ + SCGGYS LA+ LH+D ++ L+ L L P +++D++L+ A Sbjct: 334 GGFNDIAVQLWRCVEYAIKTERVMILGYENYIPVLPPYEQYFRL--KTIPGLSLMSQWEAA----DRIRHAEARGQRVTKAHGKRLPISMLLGNGEETEDG-PPFFIATASVPNVAFNPEKNYSQHILVYHKKGNRGTPESTIRHVLFSEEVKRTFLLRWGQISKPYVGMHVRGTDRKCGRKKAPQVMRKVKFLRRR--LIGAPIYLATDNPEATIEYRDEFEDNQGRKIFSFTYFP----SHQKGVEEPVKDRRMFLHDTGTGQTDTNEQGLAGETDVHIPLHLNQALKAEEKHQTNVDGFVDLLLLAFSKRFIKSCGGYSQLAKLLHQDKSLALATLGLSLPHDTDDVDSVLQEA 677
BLAST of NO14G01740 vs. NCBI_GenBank
Match: EWM19967.1 (hypothetical protein Naga_102579g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 193.0 bits (489), Expect = 4.000e-45 Identity = 96/204 (47.06%), Postives = 127/204 (62.25%), Query Frame = 0 Query: 229 VLPKVHGKVSMVYKSHAGGAEHHKHADFFVVTYRDPYEVICSMGRMFLPKIFRDNQKAVGKCRKMAENEAGIRYWAGGREGEKPQAQTQAVHINSEALKSMEGMVEVVKLLMDKWGVVGGDLDPRSVAMEVLELESPPEGVFAVANPRSELHPHHITEGEAEGGGGCGVLKSVLEEDEICRAWHDSFEAMFPLGSSAIFDERSP 433 V+PK G+VSMVYKSH E+H ADFF+VT+RDPY+++CSMG MF P F D ++A+ CR MA+NE I A A+H++ AL S E M +VV+ + KW V GG +D R VA EVLEL +PPEG+F VA+PR+ELH HIT + C L+ LE D +CRAWHD +E FP G++ + + P Sbjct: 3 VVPKAKGQVSMVYKSHWADQEYHNSADFFLVTHRDPYDMVCSMGNMFRPVFFTDFKRAISSCRGMADNEKRILRVA--------SKSGSALHVHHSALYSAESMAQVVEAMALKWNVTGGKIDARGVAREVLELRAPPEGIFPVAHPRTELHADHIT-ASSSTKKDCTELRRALEADSVCRAWHDRYEQSFPPGTAQLVRDSIP 197
BLAST of NO14G01740 vs. NCBI_GenBank
Match: EWM24996.1 (hypothetical protein Naga_100068g30, partial [Nannochloropsis gaditana]) HSP 1 Score: 80.5 bits (197), Expect = 2.900e-11 Identity = 53/123 (43.09%), Postives = 71/123 (57.72%), Query Frame = 0 Query: 102 SIRLSTFFGVVFLVELLLLVYIKYSSLPPPTPDTGHMLALGSFASGSAAADSVSSTQDVSNTSTSTVPYVP---PRLARPLTVACLSSQRTVSTTAFNLVRVLMERVDPNSISGWEHDVIGSK 222 S +L + G++F +L ++ + SS S A A ++ S +S+ TVP PRL++PL VACL++ RTVSTTA+NL RVLMERVDPNS+SGWE DV GSK Sbjct: 12 SSQLLSLLGLIFCAQLYIIFHSSSSS---------------SCAGKEQHAIPTPASLAASPSSSPTVPLEDPPLPRLSKPLIVACLANMRTVSTTAYNLARVLMERVDPNSVSGWEKDVTGSK 119
BLAST of NO14G01740 vs. NCBI_GenBank
Match: EWM24994.1 (hypothetical protein Naga_101727g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 68.6 bits (166), Expect = 1.100e-7 Identity = 48/127 (37.80%), Postives = 68/127 (53.54%), Query Frame = 0 Query: 102 SIRLSTFFGVVFLVELLLLVYIKYSSLPPPTPDTGHMLALGSFASGSAAADSVSSTQDVSNTSTSTVPYVP---PRLARPLTVACLSSQRTVSTTAFNLVRVLMERVDPNSISGWEHDVIGSKPGER 226 S +L G++F +L ++ + SS A A ++ S +S+ TVP PRL++PL VACL++ RTVSTTA+NL RVLMERVD NS+SGWE + I G++ Sbjct: 34 SSQLLLLLGLIFCAQLYIIFHSSSSSC----------------AGKEQHAIPTPASLAASPSSSPTVPLEDPPLPRLSKPLIVACLANMRTVSTTAYNLARVLMERVDSNSVSGWEKNPIQDVAGKK 144 The following BLAST results are available for this feature:
BLAST of NO14G01740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G01740 ID=NO14G01740|Name=NO14G01740|organism=Nannochloropsis oceanica|type=gene|length=3022bpback to top protein sequence of NO14G01740.1 >NO14G01740.1-protein ID=NO14G01740.1-protein|Name=NO14G01740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=888bpback to top Synonyms
Publications
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