NO14G01740, NO14G01740 (gene) Nannochloropsis oceanica

Overview
NameNO14G01740
Unique NameNO14G01740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3022
Alignment locationchr14:535628..538649 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:535628..538649 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO14G01740 vs. NCBI_GenBank
Match: EWM24604.1 (hypothetical protein Naga_100171g10 [Nannochloropsis gaditana])

HSP 1 Score: 921.0 bits (2379), Expect = 2.800e-264
Identity = 471/784 (60.08%), Postives = 564/784 (71.94%), Query Frame = 0
Query:   98 RISSSIRLSTFFGVVFLVELLLLVYIKYSSLP-PPTPDTGHMLALGSFASGSAAADSVSSTQDVSNTSTSTVPYVPPRLARPLTVACLSSQRTVSTTAFNLVRVLMERVDPNSISGWEHDVIGSKPGERIQGVLPKVHGKVSMVYKSHAGGAEHHKHADFFVVTYRDPYEVICSMGRMFLPKIFRDNQKAVGKCRKMAENEAGIRYWAGGREGEKPQAQTQAVHINSEALKSMEGMVEVVKLLMDKWGVVGGDLDPRSVAMEVLELESPPEGVFAVANPRSELHPHHITEGEAEGGGGCGVLKSVLEEDEICRAWHDSFEAMFPLGSSAIFDERSPRAGLQRARKP------RVVAENEKGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGFNDITVEMWKCIQFALDTDRTLILGYENYNPVSPPWTPYFTLNQEGLPNLRIITPFQAATALNERNRRVSVFPSRLTNDLDPLLGPRPSHGHAPEGLDPLQPFPFIYSELKHLKFRFDGEYDEDVVVFHRQGNVGSGLDLLRNMRFSLEIRRTFLERWSKLSKPYIALHLRRTDKSCSDMKLEKILKALHRLGKSGLVPEGPVYVASDHPELPDNFREELEKTQAREVVSFTYHPPIHEQRNAKKEDPYLQRQKEHERHSLGLEGLHLHDDLSPEEKHQTNLDAFVDLLLLAMAQELVTSCGGYSHLARELHEDPAVVLSLLSLPKPRPGENMDALLEAAAA 875
            R+++  R++ FFGVV LVEL+ LV IK+S+LP  P PDTGHM A    +     + S    ++ +     T+PY PPRL  PLTVACLSSQRTVSTTAFNLVR+LMERVD NSISGWEHDV+GS+P ER++ +LPKVHGKVS VYKSHAGGAEHH+HADF VVTYRDPYE++CSMGRMF PKIFR   KAV KCRKMA NEAGI+ WA GREG      T+++HINS+ LKS EGM EVV+LLM+KWGV GG LDPRS+  EV++LESPPEGVF+VANPRSELHPHHIT G  +  G C VLK VL +D++CRAWHD++ AMFP GS +I DERS  A ++ AR+       ++   +    R                                                                            NGG NDITVEMWKCI+FA  T R L+L +ENYNPV+ PWTPYFTL  E +P LR +TP+QAATA+N R R VSVFPSRL + LDPLLGP+P+ G +PEGLDP QPFPF + +LKHLKFRF+  Y +DVVVFHRQGNVGSG+  LR+++F+  IR TFLERWSKL KPY+ALHLRRTDKSCSD K+E++L+ LHR+G S   PEGP+YVASDHPELP++FREELE+ Q R+VVSFTYHPP+HEQRNA  EDP  Q+ KE  RHSLG+EGLHLHDDLSP+EKHQTN+DAFVDLLLLAM++EL+TSCGGYSHLARELH++  VV S+L LP P P +++D LLEAAAA
Sbjct:   19 RMTTVSRMTIFFGVVLLVELVTLVCIKHSTLPRDPAPDTGHMFAHAPESQKEGFSRSQEERRE-TMAINETLPYEPPRLPSPLTVACLSSQRTVSTTAFNLVRILMERVDANSISGWEHDVVGSRPNERLEDILPKVHGKVSTVYKSHAGGAEHHQHADFVVVTYRDPYEIMCSMGRMFQPKIFRSEHKAVEKCRKMARNEAGIKDWA-GREG------TRSLHINSDVLKSAEGMTEVVRLLMEKWGVQGGSLDPRSITREVMDLESPPEGVFSVANPRSELHPHHIT-GSGDTEGDCDVLKEVLAQDQVCRAWHDTYAAMFPEGSPSILDERSAHAAVEEARRTLESGGFQIHNGDTGNARPSHNAKRERLASKEARSHIRRHQQGRGAWEADDRSGTGGPDKESHSQISAGEDAYMDVHASSETAFPSDKYFFCLLNGGLNDITVEMWKCIEFARTTQRVLVLAHENYNPVAAPWTPYFTL--ETIPGLRTMTPYQAATAINHRGRAVSVFPSRLQHHLDPLLGPKPAQGDSPEGLDPRQPFPFKFEKLKHLKFRFENTYHQDVVVFHRQGNVGSGVVALRHIKFAESIRSTFLERWSKLEKPYVALHLRRTDKSCSDEKMERLLQVLHRMGTSDFWPEGPIYVASDHPELPEDFREELEERQKRQVVSFTYHPPVHEQRNALHEDPDEQKMKEMRRHSLGIEGLHLHDDLSPKEKHQTNIDAFVDLLLLAMSEELLTSCGGYSHLARELHQNQDVVFSVLGLPAPGPNDDLDMLLEAAAA 791          
BLAST of NO14G01740 vs. NCBI_GenBank
Match: EWM24985.1 (hypothetical protein Naga_100122g18 [Nannochloropsis gaditana])

HSP 1 Score: 231.5 bits (589), Expect = 1.000e-56
Identity = 128/357 (35.85%), Postives = 207/357 (57.98%), Query Frame = 0
Query:  531 GGFNDITVEMWKCIQFALDTDRTLILGYENYNPVSPPWTPYFTLNQEGLPNLRIITPFQAATALNERNRRVSVFPSRLTNDLDPLLGPRPSHGHAPEGLDPLQPFPFIYSELKHLKFRFDGEYDEDVVVFHRQGNVGSGLDLLRNMRFSLEIRRTFLERWSKLSKPYIALHLRRTDKSCSDMKLEKILKALHRLGKSGLVPEGPVYVASDHPELPDNFREELEKTQAREVVSFTYHPPIHEQRNAKKEDPYLQRQK--------EHERHSLGLEG-------LHLHDDLSPEEKHQTNLDAFVDLLLLAMAQELVTSCGGYSHLARELHEDPAVVLSLLSLPKPRPGENMDALLEAA 873
            GGFNDI V++W+C+++A+ T+R +ILGYENY PV PP+  YF L  + +P L +++ ++AA    +R R       R+T      L      G+  E  D   PF    + + ++ F  +  Y + ++V+H++GN G+    +R++ FS E++RTFL RW ++SKPY+ +H+R TD+ C   K  ++++ +  L +   +   P+Y+A+D+PE    +R+E E  Q R++ SFTY P          E+P   R+         + + +  GL G       LHL+  L  EEKHQTN+D FVDLLLLA ++  + SCGGYS LA+ LH+D ++ L+ L L  P   +++D++L+ A
Sbjct:  334 GGFNDIAVQLWRCVEYAIKTERVMILGYENYIPVLPPYEQYFRL--KTIPGLSLMSQWEAA----DRIRHAEARGQRVTKAHGKRLPISMLLGNGEETEDG-PPFFIATASVPNVAFNPEKNYSQHILVYHKKGNRGTPESTIRHVLFSEEVKRTFLLRWGQISKPYVGMHVRGTDRKCGRKKAPQVMRKVKFLRRR--LIGAPIYLATDNPEATIEYRDEFEDNQGRKIFSFTYFP----SHQKGVEEPVKDRRMFLHDTGTGQTDTNEQGLAGETDVHIPLHLNQALKAEEKHQTNVDGFVDLLLLAFSKRFIKSCGGYSQLAKLLHQDKSLALATLGLSLPHDTDDVDSVLQEA 677          
BLAST of NO14G01740 vs. NCBI_GenBank
Match: EWM19967.1 (hypothetical protein Naga_102579g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 193.0 bits (489), Expect = 4.000e-45
Identity = 96/204 (47.06%), Postives = 127/204 (62.25%), Query Frame = 0
Query:  229 VLPKVHGKVSMVYKSHAGGAEHHKHADFFVVTYRDPYEVICSMGRMFLPKIFRDNQKAVGKCRKMAENEAGIRYWAGGREGEKPQAQTQAVHINSEALKSMEGMVEVVKLLMDKWGVVGGDLDPRSVAMEVLELESPPEGVFAVANPRSELHPHHITEGEAEGGGGCGVLKSVLEEDEICRAWHDSFEAMFPLGSSAIFDERSP 433
            V+PK  G+VSMVYKSH    E+H  ADFF+VT+RDPY+++CSMG MF P  F D ++A+  CR MA+NE  I   A             A+H++  AL S E M +VV+ +  KW V GG +D R VA EVLEL +PPEG+F VA+PR+ELH  HIT   +     C  L+  LE D +CRAWHD +E  FP G++ +  +  P
Sbjct:    3 VVPKAKGQVSMVYKSHWADQEYHNSADFFLVTHRDPYDMVCSMGNMFRPVFFTDFKRAISSCRGMADNEKRILRVA--------SKSGSALHVHHSALYSAESMAQVVEAMALKWNVTGGKIDARGVAREVLELRAPPEGIFPVAHPRTELHADHIT-ASSSTKKDCTELRRALEADSVCRAWHDRYEQSFPPGTAQLVRDSIP 197          
BLAST of NO14G01740 vs. NCBI_GenBank
Match: EWM24996.1 (hypothetical protein Naga_100068g30, partial [Nannochloropsis gaditana])

HSP 1 Score: 80.5 bits (197), Expect = 2.900e-11
Identity = 53/123 (43.09%), Postives = 71/123 (57.72%), Query Frame = 0
Query:  102 SIRLSTFFGVVFLVELLLLVYIKYSSLPPPTPDTGHMLALGSFASGSAAADSVSSTQDVSNTSTSTVPYVP---PRLARPLTVACLSSQRTVSTTAFNLVRVLMERVDPNSISGWEHDVIGSK 222
            S +L +  G++F  +L ++ +   SS               S A     A    ++   S +S+ TVP      PRL++PL VACL++ RTVSTTA+NL RVLMERVDPNS+SGWE DV GSK
Sbjct:   12 SSQLLSLLGLIFCAQLYIIFHSSSSS---------------SCAGKEQHAIPTPASLAASPSSSPTVPLEDPPLPRLSKPLIVACLANMRTVSTTAYNLARVLMERVDPNSVSGWEKDVTGSK 119          
BLAST of NO14G01740 vs. NCBI_GenBank
Match: EWM24994.1 (hypothetical protein Naga_101727g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 68.6 bits (166), Expect = 1.100e-7
Identity = 48/127 (37.80%), Postives = 68/127 (53.54%), Query Frame = 0
Query:  102 SIRLSTFFGVVFLVELLLLVYIKYSSLPPPTPDTGHMLALGSFASGSAAADSVSSTQDVSNTSTSTVPYVP---PRLARPLTVACLSSQRTVSTTAFNLVRVLMERVDPNSISGWEHDVIGSKPGER 226
            S +L    G++F  +L ++ +   SS                 A     A    ++   S +S+ TVP      PRL++PL VACL++ RTVSTTA+NL RVLMERVD NS+SGWE + I    G++
Sbjct:   34 SSQLLLLLGLIFCAQLYIIFHSSSSSC----------------AGKEQHAIPTPASLAASPSSSPTVPLEDPPLPRLSKPLIVACLANMRTVSTTAYNLARVLMERVDSNSVSGWEKNPIQDVAGKK 144          
The following BLAST results are available for this feature:
BLAST of NO14G01740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 5
Match NameE-valueIdentityDescription
EWM24604.12.800e-26460.08hypothetical protein Naga_100171g10 [Nannochlorops... [more]
EWM24985.11.000e-5635.85hypothetical protein Naga_100122g18 [Nannochlorops... [more]
EWM19967.14.000e-4547.06hypothetical protein Naga_102579g1, partial [Nanno... [more]
EWM24996.12.900e-1143.09hypothetical protein Naga_100068g30, partial [Nann... [more]
EWM24994.11.100e-737.80hypothetical protein Naga_101727g1, partial [Nanno... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL140nonsL140Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR025ngnoR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002413NSK002413Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01740.1NO14G01740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|36464gene_5744Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100171g10gene5873Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01740.1NO14G01740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01740 ID=NO14G01740|Name=NO14G01740|organism=Nannochloropsis oceanica|type=gene|length=3022bp
ATAATGAGATCATGAACGAGTGCTCGACAAGGGTATGCCTCTCAACGAGG
GCTTCAAAACAAAATGAGTTTGTATTCCTTACATGTAAGGCTCGGTCCAC
TCGTCAGCTCAGCCTTGCCCCCCTTCCATAGCTGTATCAGGTTCACGACT
CAGACGAGTCCAGGGCTCCAGAGTGAAGGAGTGCAATGCACATGCGTCTG
CTGTATGTAACGGCTCCATGTTCCAACTTGCTCTTCTTCGGGCTGGGTGG
GGAGAACTTCCTAGCTTGCTTGTGTGTGTACAAATCTAAGCTGTGCATCT
CTAACTTAACGAAGAACACCAAAATTACAGCCCATACTTATTGCAGGCCA
GGCCAGGCAGGCCCTTGGCCACCAAGACGGTCACTCCGTTCGCCCGAGCC
GAGAAAAGAGGAGCGCGGCGACATGAGAGGAGGCAGTGTGGGTGGTGGCC
CTGGTGGGCCTAACCACATCAACCGGCGCATATCGTCCTCGATCCGACTG
TCCACTTTCTTTGGCGTCGTATTCCTGGTAGAACTTCTGCTGTTAGTCTA
CATTAAGTACTCCTCCCTGCCCCCTCCCACTCCCGACACGGGCCACATGC
TGGCCCTCGGCTCCTTTGCGTCCGGGTCGGCGGCTGCGGATAGCGTGTCA
AGCACTCAAGATGTCAGTAATACAAGCACCAGCACTGTACCCTACGTGCC
ACCCCGCTTGGCCCGGCCCTTGACCGTGGCTTGCTTATCATCCCAGCGCA
CTGTCTCTACCACAGCCTTCAACCTGGTCCGTGTGCTTATGGAGCGGGTG
GACCCCAATTCAATCAGTGGCTGGGAGCACGATGTGATTGGCTCAAAACC
TGGTGAACGCATACAAGGCGTCCTGCCCAAGGTGCATGGAAAAGTCAGCA
TGGTCTACAAATCCCACGCGGGCGGCGCCGAGCACCACAAGCACGCAGAC
TTCTTTGTCGTCACCTATCGGGACCCTTATGAGGTTATTTGCAGCATGGG
TCGAATGTTTTTGCCTAAGATTTTTAGAGATAATCAAAAGGCTGTGGGAA
AATGTAGAAAGATGGCCGAAAACGAGGCAGGGATTAGATATTGGGCTGGC
GGGAGGGAGGGGGAGAAGCCGCAGGCGCAGACGCAGGCAGTGCACATCAA
TTCTGAAGCTTTGAAAAGCATGGAGGGGATGGTGGAGGTTGTAAAGCTGC
TGATGGATAAGTGGGGGGTGGTCGGGGGGGATTTGGACCCACGGAGTGTA
GCGATGGAGGTGCTTGAGTTGGAGTCACCGCCGGAGGGAGTTTTTGCGGT
GGCAAACCCGAGGAGTGAGTTACATCCACACCATATCACTGAAGGAGAGG
CGGAGGGCGGGGGGGGCTGTGGAGTGCTCAAAAGTGTGTTGGAGGAGGAT
GAAATATGTAGAGCTTGGCATGATAGCTTTGAGGCTATGTTTCCACTAGG
GAGCTCGGCTATCTTTGATGAGAGGTCGCCGAGGGCGGGGTTGCAAAGAG
CGAGGAAACCGCGGGTTGTGGCAGAGAACGAAAAAGGTTTGAGGCGAGCG
CGTGGGGGTGGTAATAAGGATAGCAAAAAGAATAGTGGCAAGGGAGGAAG
CAGCAGCAGTAGCAGTGGCCGTGATGCGGTGGGCGGCCGCAAAAGAAGCA
GCAGCGGCAAGGGCAGCAGCAGCCTCAATAACAACAGCCGAAAGGAGGCC
GTCACGAATGCTGATCATCCTCCCACGTCATCATCCAGAAGTTCGAACGA
GAAATACTTCTACTGCTTGCTCAATGGCGGCTTCAACGACATAACCGTCG
AGATGTGGAAATGCATCCAGTTCGCCCTCGACACGGACAGGACACTCATC
CTGGGTTATGAGAATTACAACCCCGTCTCTCCCCCGTGGACCCCCTACTT
CACCCTCAACCAAGAGGGACTACCCAACCTCCGGATTATCACACCCTTCC
AAGCTGCCACTGCCCTAAATGAACGAAACCGTCGGGTGAGCGTCTTCCCT
TCCCGTCTCACCAATGACCTCGACCCTCTCCTCGGTCCCCGTCCCTCGCA
CGGACACGCGCCCGAAGGCTTGGATCCTCTCCAGCCTTTTCCCTTCATAT
ATTCTGAGTTAAAACATCTCAAATTTAGATTTGATGGGGAGTATGATGAA
GATGTTGTCGTTTTCCATCGCCAGGGCAACGTCGGCTCCGGGCTGGATCT
CTTGAGGAACATGCGTTTCTCCTTGGAAATTCGCCGAACTTTCTTGGAGC
GATGGAGCAAGCTATCCAAGCCCTATATAGCGCTACATTTAAGACGGACG
GACAAGAGCTGCAGTGATATGAAATTGGAAAAGATTCTCAAGGCATTGCA
CCGGCTGGGGAAGTCGGGTTTGGTCCCCGAAGGCCCTGTCTACGTAGCAA
GTGACCATCCAGAACTACCAGACAACTTTCGAGAGGAGCTCGAAAAGACG
CAGGCGAGAGAGGTTGTGTCTTTCACATATCATCCGCCCATACATGAGCA
ACGGAACGCCAAGAAGGAGGATCCATACCTACAACGACAAAAGGAGCATG
AGCGGCACAGCCTGGGGTTGGAAGGTCTGCATTTACATGATGACTTGAGC
CCCGAGGAAAAGCACCAGACGAACCTTGATGCGTTTGTAGACTTACTGCT
TTTGGCTATGGCGCAAGAGCTGGTGACCTCGTGTGGGGGCTACAGTCACT
TGGCCAGAGAGCTGCACGAAGACCCGGCTGTAGTGCTCTCGCTCTTAAGT
TTGCCAAAGCCGAGACCAGGAGAGAATATGGATGCCCTTTTGGAAGCTGC
TGCTGCTGTGGAGGGGGGAGTACAATTAGAGATGATGAGTAAAACGTAGA
ATAAGGAAGAAGAGACGGAAGAGGGGAGGTTGGGATTGAGACTTTAGTGA
CGGGATGTAGATAACGTTTTTTTTTTTAGACCGACCAATTCTGTTTGTCA
TCTGTAGGCATATGGTGCACACCACGAGGGGACAGGAGAATAAAAGAAAT
GAGTGAAAATGAGTGAATGGTC
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protein sequence of NO14G01740.1

>NO14G01740.1-protein ID=NO14G01740.1-protein|Name=NO14G01740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=888bp
MHMRLLYVTAPCSNLLFFGLGGENFLACLCVYKSKLCISNLTKNTKITAH
TYCRPGQAGPWPPRRSLRSPEPRKEERGDMRGGSVGGGPGGPNHINRRIS
SSIRLSTFFGVVFLVELLLLVYIKYSSLPPPTPDTGHMLALGSFASGSAA
ADSVSSTQDVSNTSTSTVPYVPPRLARPLTVACLSSQRTVSTTAFNLVRV
LMERVDPNSISGWEHDVIGSKPGERIQGVLPKVHGKVSMVYKSHAGGAEH
HKHADFFVVTYRDPYEVICSMGRMFLPKIFRDNQKAVGKCRKMAENEAGI
RYWAGGREGEKPQAQTQAVHINSEALKSMEGMVEVVKLLMDKWGVVGGDL
DPRSVAMEVLELESPPEGVFAVANPRSELHPHHITEGEAEGGGGCGVLKS
VLEEDEICRAWHDSFEAMFPLGSSAIFDERSPRAGLQRARKPRVVAENEK
GLRRARGGGNKDSKKNSGKGGSSSSSSGRDAVGGRKRSSSGKGSSSLNNN
SRKEAVTNADHPPTSSSRSSNEKYFYCLLNGGFNDITVEMWKCIQFALDT
DRTLILGYENYNPVSPPWTPYFTLNQEGLPNLRIITPFQAATALNERNRR
VSVFPSRLTNDLDPLLGPRPSHGHAPEGLDPLQPFPFIYSELKHLKFRFD
GEYDEDVVVFHRQGNVGSGLDLLRNMRFSLEIRRTFLERWSKLSKPYIAL
HLRRTDKSCSDMKLEKILKALHRLGKSGLVPEGPVYVASDHPELPDNFRE
ELEKTQAREVVSFTYHPPIHEQRNAKKEDPYLQRQKEHERHSLGLEGLHL
HDDLSPEEKHQTNLDAFVDLLLLAMAQELVTSCGGYSHLARELHEDPAVV
LSLLSLPKPRPGENMDALLEAAAAVEGGVQLEMMSKT*
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Synonyms
Publications