|
Properties
Property Name | Value |
Description | Ring finger |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr14 | genome | chr14:498852..503724 + |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
Term | Definition |
GO:0005488 | binding |
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
GO:0016020 | membrane |
Homology
BLAST of NO14G01580 vs. NCBI_GenBank
Match: EWM24636.1 (ring finger [Nannochloropsis gaditana]) HSP 1 Score: 736.5 bits (1900), Expect = 1.000e-208 Identity = 533/810 (65.80%), Postives = 607/810 (74.94%), Query Frame = 0
Query: 1 MTTRRRSSVSFQLHESQFPLQLPQTATTYGPEVGNAASRIRRALPLPLLAFGLGMAAMGGWVWAAPAFVYAGLELYKGSKASKGHARRLSASGRARRASSGNVADLLERVRGRTLSSKLCCICLDSIPDDEPCSNLFDCKHDAQTHKACIDKWLEKHETCPLCRRDAKDPVMGEMKKYPLDVAAQIRGCRFIVLKGWQNEEYLRHFHEVRAAELIAAALESHASNAKVVAACCAAIFVIAFSSKETQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGQDLLGSGEGVEIELGGKGACELLADLVGRYENDRDVMYAGLDAAMKLAIDNPENRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRHEGCRDVASVGLDVLFALTYDAVAGPNTVSTSVLREAGACHFVLDMLQAFPLCPEIYGPGLKATACLLTLAEAHTFITGPEWCEVLCCSMRQSLEVQDMPVIEICCRVLGSLALHSEVNQVSLREAGACLMVCECLRKGICIGQALQAIADLAYDCPDNRRELGRYDAVALVVKFIENDFMDMVMFDIALMALTNLVQDDAYNAFRLQTQKVLFKEEGKECELSLYALLSHRLGAVSLIFGERACIIMMALSTFCVNDPKAQSEIGDANGCWSVVKRVKFSASGNPG-----EAHPEKCPNSDAAVMRQGLQLISDLAIQHSANQDRLREAGGIELLWLVLPELSRDPLDAARWLLTAS 806
M RRRSSVSFQL + F LP T ++G +S +R ALPLPLLAFGLGMAAMGGW+W PA V+AGLELY+G + GH RRLSAS RARRASSG AD+ RVRG+TLS K CCICLD+IPDDEPC NLFDCKHD QTHK CIDKWLEKHETCPLCRRDAKDPV+GEMKKYP +VAAQIRGCRFIV KGWQN E+ RH E+ AAEL+A AL+ H+S+ V+AAC XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G GEG E++ GGKGACELLA+++ RY DRDV+YA LDA MK+AIDNPENR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L RHEG DV SVGLDV+FALTYD + G NT S LR AGAC F+L MLQ +P PEIYGPGLKA AC LT E + ITGP+WC+V+C SM+QSLE++D+PV+EICCRVLG LA+H + NQ LR GAC M+C+CLRKG +ALQA ADLAYDC +NR ELG+ D VAL++K IE D D V DIALMAL+NLVQD NA Q + + K+C +S YA LSH L + L+FGERACIIMM LS C NDP AQS+IG NGCW VV+R++ S G G E P + P D +++RQG+QL+SDLA HS NQ RL++A G+ LL VLP+ S D D +WL+ +
Sbjct: 1 MANRRRSSVSFQLRDVHFAAHLPSNGTHRDSDIGITSSFVRAALPLPLLAFGLGMAAMGGWIWVTPALVFAGLELYRG---ASGHTRRLSASDRARRASSGANADITGRVRGKTLSLKFCCICLDTIPDDEPCFNLFDCKHDTQTHKVCIDKWLEKHETCPLCRRDAKDPVIGEMKKYPHNVAAQIRGCRFIVFKGWQNAEFHRHLIEIGAAELVANALDIHSSDPSVLAACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGEGAEVQRGGKGACELLAEVIDRYSQDRDVIYAALDAVMKMAIDNPENRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEGNKAEILMSTLWRHEGFMDVVSVGLDVIFALTYDPIEGLNTRSHPALRNAGACGFILKMLQTYPRNPEIYGPGLKAMACFLTSNEMDSSITGPDWCQVVCNSMKQSLELEDVPVLEICCRVLGQLAIHEKDNQALLRRNGACEMICDCLRKGFSKWEALQATADLAYDCQENRHELGQRDCVALLIKCIEKDPEDWVALDIALMALSNLVQDHEQNASCAGAQMIHLSTD-KDCTVSFYAFLSHLLESDRLVFGERACIIMMVLSVLCANDPAAQSKIGGVNGCWVVVQRLRISGIGPAGDSMGREDQPLRYP--DMSLLRQGVQLMSDLATAHSDNQKRLQQADGLNLLLQVLPDFSSDSSDVVQWLVAVT 804
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G01580 ID=NO14G01580|Name=NO14G01580|organism=Nannochloropsis oceanica|type=gene|length=4873bp TGCAGTCGTTTTCTGTGGTGGGCTTCAGGGTGCGCCATTGTGTAGGAGGC AGGTTGGTTGAGAGATCAACAACAGTTGTCAAAAAAGGGAAAGCAGGGAA GGGACAAAGGAAAGAAGAGAAAGACCGTGCGCGCGAGAAGAGTGTATGTG CTGCTCAAGCTTCATTTTTTTACGTGATGATGGCGGGATGATGGCGCCGC CGGCTTAAACGGCTGAATCGGGCCGGCCGACGGACTGGCCCATGGTACTA AAATACTTGACGCTCTTATGTGCGTGCTTGTCTTTGTCCCCAAACCTTTA CGCCCCTCAAGCTCCTACCTTTCACAACCTATATTTAGACACTATAGTGA GAGATACGGTAGAGTACCTGAACTGCACGCGCAGGGTGGGAGAAACCTGG GGAGAAAGCCTGTGTAAGGGAAGACCTCTCCTTCATACGACGCATACAAC AGAAAAGCGGACGAAGCTAGGAAATAAGGAGCAACCACGTCACTGACCAA GAGCGGGTAATGACAACAAGACGACGGTCATCTGTTTCCTTCCAGCTGCA TGAAAGCCAATTTCCATTGCAGCTGCCTCAGACCGCAACAACCTATGGAC CCGAGGTAGGCAACGCGGCTTCACGCATCCGTCGGGCGCTCCCGCTACCT TTGCTTGCCTTCGGATTGGGCATGGCGGCCATGgtaagtctaagaacatg ggatattagactgcgtactagtgttattttccacctggacacaatacagg gaacaggttacacctcattctttcactacgtacacagGGAGGGTGGGTGT GGGCGGCGCCTGCATTTGTGTATGCTGGGCTTGAGCTCTACAAGGGTAGT AAAGCCAGTAAAGgtgcgcgtcaagataggaggaagagtggagagggaag catcgtgagagatgatagcaagatggagaggtttacagtgaacgttttcc ccaggcaaacacggtggagacatcgcgctgcatttatagaccagtataaa agagaaattgggtcatcaagtcttctaggaatcaaggtctagaccaaatt cgacagatcaaatccgccctccccccccccaacacacccttcttgccagG TCACGCCCGTCGTTTGAGTGCATCGGGCCGGGCAAGGCGGGCGTCGTCGG GGAACGTCGCAGACCTATTGGAGCGAGTCCGAGGACGAACCTTGTCCTCC AAGCTTTGCTGTATCTGTCTAGATTCTATTCCTGATGACGAGCCATGCTC TAATCTTTTTGACTgtaagtccgtgagggagaaaagatcgtctcgctcgt atcgtcttgtgcgcattaatcgtgtcgtttcaatcgcttcccgctctcct catagGCAAGCATGACGCTCAGACGCACAAAGCCTGCATTGACAAGTGGC TGGAAAAACACGAGACTTGCCCCCTCTGCCGACGCGACGCAAAGGACCCC GTGATGGGAGAGATGAAGAAATATCCTCTCGACGTGGCGGCTCAGATTCG GGGCTGCCGCTTCATCGTGCTCAAGGGCTGGCAAAACGAGGAGTACCTCC GACATTTCCACGAGGTCAGGGCCGCTGAGCTAATTGCCGCCGCGCTTGAA AGTCATGCCTCAAATGCTAAGGTGGTAGCTGCATGTTGCGCTGCAATTTT CGTAATCGCCTTCTCCAGCAAGGAGACCCAGGAGCTCCTGTCATCCTTGG GGGTGTGCGAGAGGGTGGTCCAGACCATGGGCACGCACGGGGAGGACCTC GAAGTTCAGGCCCGTGGCTGTGGCGCCATCTATGCCTTATCGCTCTCGAA CAAACAGACGCAGCTCCAGCTCTGTGGTGCCAAGGCACCGGCCGCGTGTC TTAAAGCAATGTACCGGTATATGGACAACCCCTCGACGGCTTTATCTGCC GCCGAAGCCTTCATGTCCTTGTCCTGCGACAACAAGCTTGGCCAGGACTT GCTAGGTAGCGGTGAGGGAGTTGAAATTGAGTTAGGTGGTAAGGGTGCGT GCGAACTGCTGGCGGACCTTGTGGGTCGGTACGAGAACGACCGCGACGTC ATGTACGCTGGTTTGGATGCCGCCATGAAACTTGCGATCGACAATCCAGA AAACAGGCTCCGATTCGGTGCAGCGGGGATGTGTCGTAAAGTCATGGATG CTTTCGGACAGTACCAGGACGACGAGATATTCTTGTTGgtacgtacaggg gaggtggtgaagtgagggaaggatatgtaaaatattgtgaatcactgcag gcaggaaagacaaaagggagtgggcaactctcgactttttttatccgctc cttctatctatctacatgccttatttcagaaaatagatcgatctgtgctt cttcccacccttgctctttctgtaccaccacgctattcccgccgccccca tcagGTGGCCCTCACGGCCGTTTACACCATGGCCGAGAATCAAAAAGAAA ACCAAGCCCGTCTGCTGGAAGGAAACAGGGCTCACACATTAATGACAACA CTCCGTAGACACGAAGGATGTCGGGACGTGGCGTCGGTAGGACTGGACGT GCTTTTCGCACTGACGTATGATGCTGTGGCCGGTCCCAACACTGTCAGCA CCTCGGTGTTAAGGGAGGCGGGCGCCTGTCATTTCGTTTTGGACATGCTG CAAGCCTTTCCTCTCTGCCCTGAGATCTACGGACCGGGGCTGAAGGCAAC AGCCTGCCTCTTGACTTTGGCTGAGGCACATACGTTCATTACAGGGCCCG AGTGGTGTGAAGTGCTGTGCTGCAGCATGCGGCAGAGTCTCGAGGTGCAA GATATGCCAGTTATTGAAATATGTTGCCGCGTACTAGGCAGCCTTGCCTT GCACTCAGAGGTCAATCAAGTCTCTTTGAGAGAAGCCGGCGCGTGTCTGA TGGTATGTGAATGCTTAAGAAAAGGGATCTGCATTGGACAAGCCCTCCAG GCTATCGCCGACCTTGCCTACGACTGCCCGGACAACCGCCGAGAACTGGG TCGGTACGACGCTGTGGCACTGGTGGTCAAATTTATCGAGAATGACTTTA TGGATATGGTCATGTTTGACATCGCCCTTATGGCGCTGACGAATCTGGTC CAGGACGACGCTTACAACGCTTTCCGCTTACAAACGCAAAAGGTTCTCTT TAAGGAGGAAGGCAAAGAGTGCGAGCTCTCTCTATATGCCTTGCTGAGCC ACCGTCTGGGAGCCGTTAGCCTAATCTTTGGAGAACGCGCCTGTATCATC ATGATGGCTCTTTCCACGTTTTGTGTAAACGATCCCAAGGCTCAGTCAGA AATAGGAGACGCAAATGGTTGCTGGTCCGTGGTGAAAAGGGTCAAATTTA GCGCTAGTGGAAATCCGGGTGAAGCGCACCCAGAGAAGTGTCCCAATTCC GATGCAGCAGTCATGCGTCAAGGACTCCAATTAATTTCGGATTTGGCGAT ACAGCACTCTGCCAACCAGGACCGACTGCGAGAGGCAGGTGGCATCGAGT TGTTATGGCTGGTGCTTCCTGAACTCTCACGCGACCCTCTCGACGCAGCG CGCTGGTTGCTTACTGCCTCCATGCTCGCCGAAAACAATTCCATTAATCA AAAGCGCTTAGTGGACCTTGGGGTGCCCAAAAAAGCAATGGAGTTGTATT TACAATTTCCTGAGGATGAAGAAGTCTTGGATTCGACGTTGAGCTGTCTC ACCGCGCTGGCTGCTAACAATCGAAGTCATCAAGACCACATTGGGTCTCT CGGCGCCTGCGAGATGGTTTGTCAGGTGGCAATGCGAGCAGTAGATAATG CACATCTTCTGACGCGCTGCTGTTCGTTCGTTTTAGCACTCTCCGAATTG CAAAAGTTTGATGCCTACGGTCGACCGCTGCATATCTGGAGgtaagtatc cttcttacgtcagccgaaggggtatttgtggatttctcttacaatcatga atggggaaagtgttgcgttacataaatagtatgtatcttaatgaaatctg gctgattattgtaaacacacaacagGGACAATACGTATTCTAACAAGAAC CGGTTACGGGAGAGCGGTGCTATCGCAAGCTTTGGCAAGGCCCTCACGTC GAACATTTCGCGAAATGCGGATCCTGTCATACTTGGAAGTCTTGTCCTCA GTCTTGCTCTGATTGCCGAGGATGATGTGCATACTTTCGCGCAATTGCAG AGTGAAGGCATCTTCCAACTGGTGGTGGATTTGACTCGTCAGTACCCGAA CCAGGACACAGTGTTGATGGCCACCAGCGGGCTCTTTGCCACCTGCTCCG TAATATTCAACGATGACTGGACGGAGTGGAGCCAGTTCCAGACGCCTGTG GAGAAAAATCAAGATATTTTTATCGCTGGCGGTGCCATCCCCTACATCCT CAATGCCATGAAAGGCACGCAGCTTGTTAAAAGTACCATGGTTATGAGTT TTATCTCGTTGAGTGCTTTGACGTGGCAAAACGCAAAGGGAATACAATCA CTCATTGACGAGGTCGATTTTATCGACGAAGTGTTAGGCAATACTTCCTG TGGGGGATCCGACAGCTTGTTCTATGGGCTGTTGCTGCTGGGCTCGATGA TAAGCTTCGCTAACCCGGAGATGGAGGTTCTTGCTCGCTGTTGCCCCGTC ATCTACCGCTGGGAGAAGGTAGCGCGCGACACATACCCTGATAACACCTG TTTGGTCAGGTTACGGGGCATTCTTATTGCTCACATACAGAAGGCGGCTG CGGCACATCCGTTTGGATTTGATGCCGCATGAGAGGGATGTGATTCCACT TCTAGGACGACTTGTATATGTATGCTGCATCGGGAGATTCGAGCAAAAGG GCAACTTTTGGTAGAAATAAGTG back to topprotein sequence of NO14G01580.1 >NO14G01580.1-protein ID=NO14G01580.1-protein|Name=NO14G01580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1164bp MTTRRRSSVSFQLHESQFPLQLPQTATTYGPEVGNAASRIRRALPLPLLA FGLGMAAMGGWVWAAPAFVYAGLELYKGSKASKGHARRLSASGRARRASS GNVADLLERVRGRTLSSKLCCICLDSIPDDEPCSNLFDCKHDAQTHKACI DKWLEKHETCPLCRRDAKDPVMGEMKKYPLDVAAQIRGCRFIVLKGWQNE EYLRHFHEVRAAELIAAALESHASNAKVVAACCAAIFVIAFSSKETQELL SSLGVCERVVQTMGTHGEDLEVQARGCGAIYALSLSNKQTQLQLCGAKAP AACLKAMYRYMDNPSTALSAAEAFMSLSCDNKLGQDLLGSGEGVEIELGG KGACELLADLVGRYENDRDVMYAGLDAAMKLAIDNPENRLRFGAAGMCRK VMDAFGQYQDDEIFLLVALTAVYTMAENQKENQARLLEGNRAHTLMTTLR RHEGCRDVASVGLDVLFALTYDAVAGPNTVSTSVLREAGACHFVLDMLQA FPLCPEIYGPGLKATACLLTLAEAHTFITGPEWCEVLCCSMRQSLEVQDM PVIEICCRVLGSLALHSEVNQVSLREAGACLMVCECLRKGICIGQALQAI ADLAYDCPDNRRELGRYDAVALVVKFIENDFMDMVMFDIALMALTNLVQD DAYNAFRLQTQKVLFKEEGKECELSLYALLSHRLGAVSLIFGERACIIMM ALSTFCVNDPKAQSEIGDANGCWSVVKRVKFSASGNPGEAHPEKCPNSDA AVMRQGLQLISDLAIQHSANQDRLREAGGIELLWLVLPELSRDPLDAARW LLTASMLAENNSINQKRLVDLGVPKKAMELYLQFPEDEEVLDSTLSCLTA LAANNRSHQDHIGSLGACEMVCQVAMRAVDNAHLLTRCCSFVLALSELQK FDAYGRPLHIWRDNTYSNKNRLRESGAIASFGKALTSNISRNADPVILGS LVLSLALIAEDDVHTFAQLQSEGIFQLVVDLTRQYPNQDTVLMATSGLFA TCSVIFNDDWTEWSQFQTPVEKNQDIFIAGGAIPYILNAMKGTQLVKSTM VMSFISLSALTWQNAKGIQSLIDEVDFIDEVLGNTSCGGSDSLFYGLLLL GSMISFANPEMEVLARCCPVIYRWEKVARDTYPDNTCLVRLRGILIAHIQ KAAAAHPFGFDAA* back to topprotein sequence of NO14G01580.2 >NO14G01580.2-protein ID=NO14G01580.2-protein|Name=NO14G01580.2|organism=Nannochloropsis oceanica|type=polypeptide|length=913bp MTTRRRSSVSFQLHESQFPLQLPQTATTYGPEVGNAASRIRRALPLPLLA FGLGMAAMGGWVWAAPAFVYAGLELYKGSKASKGHARRLSASGRARRASS GNVADLLERVRGRTLSSKLCCICLDSIPDDEPCSNLFDCKHDAQTHKACI DKWLEKHETCPLCRRDAKDPVMGEMKKYPLDVAAQIRGCRFIVLKGWQNE EYLRHFHEVRAAELIAAALESHASNAKVVAACCAAIFVIAFSSKETQELL SSLGVCERVVQTMGTHGEDLEVQARGCGAIYALSLSNKQTQLQLCGAKAP AACLKAMYRYMDNPSTALSAAEAFMSLSCDNKLGQDLLGSGEGVEIELGG KGACELLADLVGRYENDRDVMYAGLDAAMKLAIDNPENRLRFGAAGMCRK VMDAFGQYQDDEIFLLVALTAVYTMAENQKENQARLLEGNRAHTLMTTLR RHEGCRDVASVGLDVLFALTYDAVAGPNTVSTSVLREAGACHFVLDMLQA FPLCPEIYGPGLKATACLLTLAEAHTFITGPEWCEVLCCSMRQSLEVQDM PVIEICCRVLGSLALHSEVNQVSLREAGACLMVCECLRKGICIGQALQAI ADLAYDCPDNRRELGRYDAVALVVKFIENDFMDMVMFDIALMALTNLVQD DAYNAFRLQTQKVLFKEEGKECELSLYALLSHRLGAVSLIFGERACIIMM ALSTFCVNDPKAQSEIGDANGCWSVVKRVKFSASGNPGEAHPEKCPNSDA AVMRQGLQLISDLAIQHSANQDRLREAGGIELLWLVLPELSRDPLDAARW LLTASMLAENNSINQKRLVDLGVPKKAMELYLQFPEDEEVLDSTLSCLTA LAANNRSHQDHIGSLGACEMVCQVAMRAVDNAHLLTRCCSFVLALSELQK FDAYGRPLHIWR* back to topprotein sequence of NO14G01580.3 >NO14G01580.3-protein ID=NO14G01580.3-protein|Name=NO14G01580.3|organism=Nannochloropsis oceanica|type=polypeptide|length=993bp MGEMKKYPLDVAAQIRGCRFIVLKGWQNEEYLRHFHEVRAAELIAAALES HASNAKVVAACCAAIFVIAFSSKETQELLSSLGVCERVVQTMGTHGEDLE VQARGCGAIYALSLSNKQTQLQLCGAKAPAACLKAMYRYMDNPSTALSAA EAFMSLSCDNKLGQDLLGSGEGVEIELGGKGACELLADLVGRYENDRDVM YAGLDAAMKLAIDNPENRLRFGAAGMCRKVMDAFGQYQDDEIFLLVALTA VYTMAENQKENQARLLEGNRAHTLMTTLRRHEGCRDVASVGLDVLFALTY DAVAGPNTVSTSVLREAGACHFVLDMLQAFPLCPEIYGPGLKATACLLTL AEAHTFITGPEWCEVLCCSMRQSLEVQDMPVIEICCRVLGSLALHSEVNQ VSLREAGACLMVCECLRKGICIGQALQAIADLAYDCPDNRRELGRYDAVA LVVKFIENDFMDMVMFDIALMALTNLVQDDAYNAFRLQTQKVLFKEEGKE CELSLYALLSHRLGAVSLIFGERACIIMMALSTFCVNDPKAQSEIGDANG CWSVVKRVKFSASGNPGEAHPEKCPNSDAAVMRQGLQLISDLAIQHSANQ DRLREAGGIELLWLVLPELSRDPLDAARWLLTASMLAENNSINQKRLVDL GVPKKAMELYLQFPEDEEVLDSTLSCLTALAANNRSHQDHIGSLGACEMV CQVAMRAVDNAHLLTRCCSFVLALSELQKFDAYGRPLHIWRDNTYSNKNR LRESGAIASFGKALTSNISRNADPVILGSLVLSLALIAEDDVHTFAQLQS EGIFQLVVDLTRQYPNQDTVLMATSGLFATCSVIFNDDWTEWSQFQTPVE KNQDIFIAGGAIPYILNAMKGTQLVKSTMVMSFISLSALTWQNAKGIQSL IDEVDFIDEVLGNTSCGGSDSLFYGLLLLGSMISFANPEMEVLARCCPVI YRWEKVARDTYPDNTCLVRLRGILIAHIQKAAAAHPFGFDAA* back to top
|