NO14G01530, NO14G01530 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G01530 vs. NCBI_GenBank
Match: EWM24669.1 (CCT domain protein [Nannochloropsis gaditana]) HSP 1 Score: 224.9 bits (572), Expect = 5.300e-55 Identity = 212/452 (46.90%), Postives = 235/452 (51.99%), Query Frame = 0 Query: 1 MSTLSMQAAPSLGHPMEKLLDNYMMAERGGGA--EEGGAGATFMVEDGGMISYTGVFMDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSAAPEGD-KGEGWKMALLEGLEDFLKVEGAVPAGAAGSGGSRRFSFDLSNLDMQTLEQLAXXXXXXXXXXXXXXXXXXXXAEGLMAKGSLPVGTAAPFPSSGPRGNGNGSGLPLGNMRVKQ--EMPVDTASRSNSVSSLGTTAXXXXXXXXXDISDPVSNRSMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTPQTPHKAILTPXXXXXXXXXXXXXXXTNATMVNSPNGNGGTLVLPIIPKDGIARIGIYTLEERKVRVARFQAKRGRRVWRKKIKYDCRKKLADNRPRVKGRFVRRDEEID 448 MSTLS+ +APSLG MEKL DNY AERG GA EE G ATFMVEDGG+ISY G+F+DD XXXXXXXXX S AP D KGE WK A+LE LEDFL+ EG +P AAG+G +RRFSFDLSNLDMQTLEQLA AEG M K S P + AP SSG R + LP G ++ + V + ++LG V N S+S XXXXXXXXXXXXXX XXXXXXXXXXXXXXX G LVLP+IPKDG+ARIGIYTLEERK+RVARFQAKRGRR+WRKKIKYDCRKKLADNRPRVKGRFVRRDEEID Sbjct: 1 MSTLSIHSAPSLG--MEKLWDNYAPAERGEGAGCEEAGGSATFMVEDGGIISYAGIFLDDKEDSDDETSDSSTDAEVVMAHLHAAFGGVGAPQANSIFNTSSGXXXXXXXXXXXSIAPGSDGKGEEWKNAVLESLEDFLQTEGGIP--AAGAGANRRFSFDLSNLDMQTLEQLAAGTTSGSSSRRGSFSLTLLEAEGFMTK-SPPASSMAPLLSSGARFHSVPDNLPAGFSHTQEGCKEHVVCDCKKTLTTALGEDG----------AGHSVPNASVS----------ASKNTGTGASCALEPLTKPQVKKGFAAASTPTGESSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMLVLPVIPKDGVARIGIYTLEERKLRVARFQAKRGRRIWRKKIKYDCRKKLADNRPRVKGRFVRRDEEID 427
BLAST of NO14G01530 vs. NCBI_GenBank
Match: GAX11852.1 (hypothetical protein FisN_20Lh091 [Fistulifera solaris]) HSP 1 Score: 95.5 bits (236), Expect = 4.800e-16 Identity = 49/82 (59.76%), Postives = 64/82 (78.05%), Query Frame = 0 Query: 366 ATMVNSPNGNGGTLVLPIIPKDGIARIGIYTLEERKVRVARFQAKRGRRVWRKKIKYDCRKKLADNRPRVKGRFVRRDEEID 448 AT++ SP G+ TL L ++ KDG RIGIY + R+ R+ARF AKR +R+WRK+IKYDCRKKLAD+RPR+KGRFV+R + D Sbjct: 499 ATLLVSP-GSSTTLCLELVNKDG--RIGIYLPDARRARIARFHAKRAKRIWRKRIKYDCRKKLADSRPRIKGRFVKRTDMDD 577
BLAST of NO14G01530 vs. NCBI_GenBank
Match: GAX23885.1 (hypothetical protein FisN_20Hh091 [Fistulifera solaris]) HSP 1 Score: 95.1 bits (235), Expect = 6.300e-16 Identity = 49/82 (59.76%), Postives = 64/82 (78.05%), Query Frame = 0 Query: 366 ATMVNSPNGNGGTLVLPIIPKDGIARIGIYTLEERKVRVARFQAKRGRRVWRKKIKYDCRKKLADNRPRVKGRFVRRDEEID 448 AT++ SP G+ TL L ++ KDG RIGIY + R+ R+ARF AKR +R+WRK+IKYDCRKKLAD+RPR+KGRFV+R + D Sbjct: 499 ATLLVSP-GSSTTLSLELVNKDG--RIGIYLPDARRARIARFHAKRAKRIWRKRIKYDCRKKLADSRPRIKGRFVKRTDMDD 577
BLAST of NO14G01530 vs. NCBI_GenBank
Match: OEU15813.1 (hypothetical protein FRACYDRAFT_261853 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 87.0 bits (214), Expect = 1.700e-13 Identity = 44/76 (57.89%), Postives = 58/76 (76.32%), Query Frame = 0 Query: 369 VNSPNGNGGTLVLPIIPKDGIARIGIYTLEERKVRVARFQAKRGRRVWRKKIKYDCRKKLADNRPRVKGRFVRRDE 445 V+S + T + ++ KDG RIGIY E R++R+ARF AKR R+WRK+IKYDCRKKLAD+RPR+KGRFV+R + Sbjct: 629 VSSSAQSPPTFQMELLNKDG--RIGIYLPEARRLRIARFHAKRKMRIWRKRIKYDCRKKLADSRPRIKGRFVKRSD 702
BLAST of NO14G01530 vs. NCBI_GenBank
Match: XP_002290578.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92330.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 83.2 bits (204), Expect = 2.500e-12 Identity = 38/52 (73.08%), Postives = 46/52 (88.46%), Query Frame = 0 Query: 391 RIGIYTLEERKVRVARFQAKRGRRVWRKKIKYDCRKKLADNRPRVKGRFVRR 443 R+GIY EERK R+A+F +KR R+WRK+IKYDCRKKLAD+RPRVKGRFV+R Sbjct: 815 RVGIYLPEERKARIAKFHSKRKTRIWRKRIKYDCRKKLADSRPRVKGRFVKR 866
BLAST of NO14G01530 vs. NCBI_GenBank
Match: CBN75530.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 77.0 bits (188), Expect = 1.800e-10 Identity = 37/55 (67.27%), Postives = 45/55 (81.82%), Query Frame = 0 Query: 391 RIGIYTLEERKVRVARFQAKRGRRVWRKKIKYDCRKKLADNRPRVKGRFVRRDEE 446 RIGIYT +ER+ +ARF+ KRGRRVW+KKI+Y+CRK LAD R RVKGRFV+ E Sbjct: 390 RIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPE 444
BLAST of NO14G01530 vs. NCBI_GenBank
Match: XP_002289027.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94463.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 75.9 bits (185), Expect = 3.900e-10 Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = 0 Query: 371 SPNGNGGTLVLP--------IIPKDGIARIGIYTLEERKVRVARFQAKRGRRVWRKKIKYDCRKKLADNRPRVKGRFVRRDEE 446 S G G L LP + K+G RIGIYT ER V + +F AKR RRVW KKI+Y+CRK LAD R RVKGRFV+R+ + Sbjct: 370 SGGGEKGVLTLPHSLSKYKEVYNKNG--RIGIYTPAERAVIITKFNAKRARRVWNKKIRYNCRKNLADRRLRVKGRFVKRNAD 450
BLAST of NO14G01530 vs. NCBI_GenBank
Match: OAE25686.1 (hypothetical protein AXG93_4368s1460 [Marchantia polymorpha subsp. ruderalis] >PTQ41644.1 hypothetical protein MARPO_0033s0056 [Marchantia polymorpha] >PTQ41645.1 hypothetical protein MARPO_0033s0056 [Marchantia polymorpha]) HSP 1 Score: 75.1 bits (183), Expect = 6.700e-10 Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 0 Query: 386 KDGIARIGIYTLEERKVRVARFQAKRGRRVWRKKIKYDCRKKLADNRPRVKGRFVRRDE 445 +DG +IG YT+EERK+R+ R+Q KR +R + KKIKY CRK LAD+RPRV+GRF + DE Sbjct: 446 EDGGFKIGRYTIEERKIRIHRYQQKRTQRNFNKKIKYACRKTLADSRPRVRGRFAKNDE 504
BLAST of NO14G01530 vs. NCBI_GenBank
Match: PTQ41643.1 (hypothetical protein MARPO_0033s0056 [Marchantia polymorpha]) HSP 1 Score: 75.1 bits (183), Expect = 6.700e-10 Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 0 Query: 386 KDGIARIGIYTLEERKVRVARFQAKRGRRVWRKKIKYDCRKKLADNRPRVKGRFVRRDE 445 +DG +IG YT+EERK+R+ R+Q KR +R + KKIKY CRK LAD+RPRV+GRF + DE Sbjct: 446 EDGGFKIGRYTIEERKIRIHRYQQKRTQRNFNKKIKYACRKTLADSRPRVRGRFAKNDE 504
BLAST of NO14G01530 vs. NCBI_GenBank
Match: XP_008617179.1 (hypothetical protein SDRG_12875 [Saprolegnia diclina VS20] >EQC29412.1 hypothetical protein SDRG_12875 [Saprolegnia diclina VS20]) HSP 1 Score: 74.7 bits (182), Expect = 8.800e-10 Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 0 Query: 392 IGIYTLEERKVRVARFQAKRGRRVWRKKIKYDCRKKLADNRPRVKGRFVRRDEEIDII 450 IG YT RK+R+ +F KR +R+W+K IKYDCRKKLAD+RPR+KGRFVR E ++++ Sbjct: 230 IGAYTPAARKLRLEKFHEKRKKRIWKKSIKYDCRKKLADDRPRIKGRFVRVLENLNLV 287 The following BLAST results are available for this feature:
BLAST of NO14G01530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G01530 ID=NO14G01530|Name=NO14G01530|organism=Nannochloropsis oceanica|type=gene|length=1801bpback to top protein sequence of NO14G01530.1 >NO14G01530.1-protein ID=NO14G01530.1-protein|Name=NO14G01530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=487bpback to top Synonyms
Publications
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