NO14G01520, NO14G01520 (gene) Nannochloropsis oceanica

Overview
NameNO14G01520
Unique NameNO14G01520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2886
Alignment locationchr14:476895..479780 +

Link to JBrowse

Properties
Property NameValue
DescriptionTetratricopeptide-like helical protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:476895..479780 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR036322WD40_repeat_dom_sf
IPR013026TPR-contain_dom
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
Homology
BLAST of NO14G01520 vs. NCBI_GenBank
Match: EWM24660.1 (Tetratricopeptide-like helical protein [Nannochloropsis gaditana])

HSP 1 Score: 646.7 bits (1667), Expect = 9.800e-182
Identity = 373/801 (46.57%), Postives = 493/801 (61.55%), Query Frame = 0
Query:   61 TWEAFVDSPATLFQPHHHPAHLLRQREEHGRLRTRTTVPAPASYYTPGFTPFEMRHQLAFVTK-SFDCVGRASPLRHEGCVNAACWSENGQFLYTAGDDRLVQSWDVTRGFKHLREINTLHEGNIFGVQVVPGHPELLLTNSADGTLRIHDISSRG---SERLVGT-CDPHAVMHGFCFWDGG--CSGGVGQVVLTAQGNGIVVKYDLREASSAGQAMYRRGSPSGQQLSVKAVVTPDIYNTAKGISPFMMCLGGHGPTLEVYDLRRLPCMAAKPLQMYRPQGLPEFLSQTHLGMEEEVSVSGLAYSKDRGEILVSFQGDQIYGFNTA----DAACGEGGETHEAWSVGGHINSQTFLKSVTYFGPREEYIVCGDDLAHTWIWDRRSGMLVNLVCTDMSVANGCVSHPFLPMLACWGIDDTVKVLAVGGRY--------SSFKKDESVDKALEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERQAHPWDMEWLQSLPSIYFGTVLETGMAMGVFSNPGKP-RMVYDHERYRQHVKRIRQFMSEPCDHLPDYPTDC-SNSFTLDELEGLLLQVKEMGNFFFKAKQYGRASRCYKKIQMWLYSLAGMRVKIYKMQVEASALGERDQFDRLEFPV---ESTLSPSVQQHTRCQAVVAKHLKGTSGPVGGEAL-------AEDRTGEEVKDVMFARLLNLLVTVHLNMAMTARALGHHLAAISLCTSVIRIKPREAKAFYLRGVAALELGENFETTVQDLVKARDLAPGDALIARKLAEARRLLKAQQAREFRAYATFFS 831
            TWEAF D P+TLF P +  A +LR+RE +G+LR R    + A  Y+P FTPF++R +L FV + S       S L+H+GCVN ACWSE+G+ L+TAGDDR ++ W  T  F     + + H  NIFGVQV P  P+ L+T +ADGTLR H I       +  +VGT C PH VMHGF FW+GG    GG GQ++LTAQG+G+V+ YDLRE  SAG+AMYRR      Q+ VKAVVTP ++NTA G+S FMM LGGHG TLE +DLRRLP   +KP+Q+YRPQGLP  L +     +E VS+SGLA+SK RGE+L S+QGDQIYGF TA         E   + EAWS+GGH+N QTFLK+VTYFGP EEYI CGDD  H+++WDRR+GMLVN + TD+SVANGCVSHPFLPMLAC+GIDDTVKVLAVGGRY          F +++S D   ++                                 R     ++   +  P+ YF  +LE  +   +  +  KP R+VYD  R+  HV+RIR+F+  P + LPDYP+D      +L+EL+GLL+ +KE GN  FK  +Y  A+  Y KI  WL+S A +   I   + E   L   D ++  + PV    + L P  +Q  R  A++A +       +  EA+       A   + + VK+     L++LLV+  LN+AM       +  AI LCT  IR +P +AKA+Y RG AALELG+++E   +DL+KA  LAP D LI RKL   R+++KA++ARE RAYA+FFS
Sbjct:    6 TWEAFADCPSTLFSPQNRSASILRKREIYGQLRRRDATDSAA--YSPAFTPFDVR-RLGFVGRASHKRSWLNSVLKHDGCVNTACWSEDGRILFTAGDDRDIKIWLATYDFSAQGVVASGHSANIFGVQVPPNRPDELVTCAADGTLRRHQIDCNHPVIAGHVVGTSCAPH-VMHGFSFWEGGSDSGGGRGQIILTAQGDGLVMMYDLREQCSAGRAMYRR------QVPVKAVVTPPVHNTASGVSAFMMYLGGHGATLEAHDLRRLPRTGSKPVQIYRPQGLPRHLDE---DFQENVSLSGLAFSKMRGEVLASYQGDQIYGFATACYEERRIAQEDRASMEAWSLGGHVNCQTFLKNVTYFGPAEEYIACGDDSGHSFLWDRRTGMLVNAIRTDLSVANGCVSHPFLPMLACYGIDDTVKVLAVGGRYRQPEGANGDDFVEEDS-DNGWQDTHRMPYEAQRREMGRGSDGTAPEYRNLRGSRRPRSRS--NLHRTELPPNQYFAQLLEKNLNKVIAIDAPKPLRVVYDFNRFCHHVRRIRKFLINPNECLPDYPSDLWDRQLSLEELKGLLMALKEKGNLSFKKMEYRIAAASYGKILNWLFSSAELEPHIRMTREENFKLWNGDDYE--DAPVVFFGTLLPPHARQRERINAILAGNFTEDGANIAVEAVERKSDANAASISSQAVKE----ELMDLLVSSLLNLAMAVLKQNEYKRAIKLCTLAIRHRPFDAKAYYRRGSAALELGDDYEAGTKDLIKACKLAPNDVLIRRKLETCRQIVKARKARESRAYASFFS 784          
BLAST of NO14G01520 vs. NCBI_GenBank
Match: KOM44228.1 (hypothetical protein LR48_Vigan05g183300, partial [Vigna angularis])

HSP 1 Score: 150.2 bits (378), Expect = 2.900e-32
Identity = 104/370 (28.11%), Postives = 174/370 (47.03%), Query Frame = 0
Query:  121 VTKSFDCVGRASPLRHEGCVNAACWSENGQFLYTAGDDRLVQSWDVTRGFKHLREINTLHEGNIFGVQVVPGHPEL-LLTNSADGTLRIHDISSRG--SERLVGTCDPHAVMHGFCFWDGGCSGGVGQVVLTAQGNGIVVKYDLREASSAGQAMYRRGSPSGQQLSVKAVVTPDIYNTAKGISPFMMCLGGHGPTLEVYDLRRLPCMAAK----PLQMYRPQGLPEFLSQTHLGMEEEVSVSGLAYSKDRGEILVSFQGDQIYGFNTADAACGEGG-----ETHEAWSVGGHINSQTFLKSVTYFGPREEYIVCGDDLAHTWIWDRRSGMLVNLVCTDMSVANGCVSHPFLPMLACWGIDDTVKVLAVGG 479
            + KS +  G+     H GCVNA  ++  G  L +  DDR V  W+     + L    + H  NIF  +++P   +  ++T++ DG +R+      G     L+G        H  C +      G   +  ++  +G +  +DLR  S++   ++   S +G+Q   K  +T  + +     +P+   +GG      VYD+R+   ++A+    P++ + P+         HL     V ++GLAYS    E+LVS+  + IY F   +  C          T+E     GH N+QT +K V +FGP +EY++ G D  H +IW ++   LV L+  D  V N   +HP +P+LA  GI+  VK+ A  G
Sbjct:    1 LVKSLNLYGKLD--GHGGCVNAVEFNSTGDLLVSGSDDRQVMLWNWASNAR-LLAYPSGHTDNIFQTKIMPFSGDCRIITSAGDGQVRLGLFREDGGVETTLLG-------KHHGCVYKLAVEPGSPHIFYSSGEDGFIQHFDLR--SNSATKLFCCSSSTGKQTPSKIGLTSIVIDCR---NPYYFAVGGSDEYARVYDIRKCQWVSARNSDQPVKTFCPR---------HLIGSNNVHITGLAYS-SLSELLVSYNDELIYLFQKNEGMCSSPSSEDLKNTNEPRVYSGHRNAQT-IKGVNFFGPNDEYVLSGSDCGHIFIWKKKEAKLVRLMVGDQHVVNQLEAHPHIPILATCGIEKNVKIWAPQG 344          
BLAST of NO14G01520 vs. NCBI_GenBank
Match: XP_017423106.1 (PREDICTED: DDB1- and CUL4-associated factor 8 [Vigna angularis] >BAT91933.1 hypothetical protein VIGAN_07057700 [Vigna angularis var. angularis])

HSP 1 Score: 150.2 bits (378), Expect = 2.900e-32
Identity = 104/370 (28.11%), Postives = 174/370 (47.03%), Query Frame = 0
Query:  121 VTKSFDCVGRASPLRHEGCVNAACWSENGQFLYTAGDDRLVQSWDVTRGFKHLREINTLHEGNIFGVQVVPGHPEL-LLTNSADGTLRIHDISSRG--SERLVGTCDPHAVMHGFCFWDGGCSGGVGQVVLTAQGNGIVVKYDLREASSAGQAMYRRGSPSGQQLSVKAVVTPDIYNTAKGISPFMMCLGGHGPTLEVYDLRRLPCMAAK----PLQMYRPQGLPEFLSQTHLGMEEEVSVSGLAYSKDRGEILVSFQGDQIYGFNTADAACGEGG-----ETHEAWSVGGHINSQTFLKSVTYFGPREEYIVCGDDLAHTWIWDRRSGMLVNLVCTDMSVANGCVSHPFLPMLACWGIDDTVKVLAVGG 479
            + KS +  G+     H GCVNA  ++  G  L +  DDR V  W+     + L    + H  NIF  +++P   +  ++T++ DG +R+      G     L+G        H  C +      G   +  ++  +G +  +DLR  S++   ++   S +G+Q   K  +T  + +     +P+   +GG      VYD+R+   ++A+    P++ + P+         HL     V ++GLAYS    E+LVS+  + IY F   +  C          T+E     GH N+QT +K V +FGP +EY++ G D  H +IW ++   LV L+  D  V N   +HP +P+LA  GI+  VK+ A  G
Sbjct:   47 LVKSLNLYGKLD--GHGGCVNAVEFNSTGDLLVSGSDDRQVMLWNWASNAR-LLAYPSGHTDNIFQTKIMPFSGDCRIITSAGDGQVRLGLFREDGGVETTLLG-------KHHGCVYKLAVEPGSPHIFYSSGEDGFIQHFDLR--SNSATKLFCCSSSTGKQTPSKIGLTSIVIDCR---NPYYFAVGGSDEYARVYDIRKCQWVSARNSDQPVKTFCPR---------HLIGSNNVHITGLAYS-SLSELLVSYNDELIYLFQKNEGMCSSPSSEDLKNTNEPRVYSGHRNAQT-IKGVNFFGPNDEYVLSGSDCGHIFIWKKKEAKLVRLMVGDQHVVNQLEAHPHIPILATCGIEKNVKIWAPQG 390          
BLAST of NO14G01520 vs. NCBI_GenBank
Match: XP_007150237.1 (hypothetical protein PHAVU_005G137900g [Phaseolus vulgaris] >ESW22231.1 hypothetical protein PHAVU_005G137900g [Phaseolus vulgaris])

HSP 1 Score: 149.1 bits (375), Expect = 6.400e-32
Identity = 104/365 (28.49%), Postives = 172/365 (47.12%), Query Frame = 0
Query:  121 VTKSFDCVGRASPLRHEGCVNAACWSENGQFLYTAGDDRLVQSWDVTRGFKHLREINTLHEGNIFGVQVVPGHPEL-LLTNSADGTLRIHDISSRG--SERLVGTCDPHAVMHGFCFWDGGCSGGVGQVVLTAQGNGIVVKYDLREASSAGQAMYRRGSPSGQQLSVKAVVTPDIYNTAKGISPFMMCLGGHGPTLEVYDLRRLPCMAAK----PLQMYRPQGLPEFLSQTHLGMEEEVSVSGLAYSKDRGEILVSFQGDQIYGFNTADAAC----GEG-GETHEAWSVGGHINSQTFLKSVTYFGPREEYIVCGDDLAHTWIWDRRSGMLVNLVCTDMSVANGCVSHPFLPMLACWGIDDTVKV 474
            + KS +  GR     HEGCVNA  ++ +G  L +  DDR V  W+     + L    + H  NIF  +++P   +  ++T++ DG +R+      G     L+G        H  C +      G   +  ++  +G +  +DLR  S++   ++   S +G+Q     +    I    +  +P+   +GG      VYD+R+   ++ +    P+  + P         +HL     V ++GLAYS D  E+LVS+  + IY F   +  C     EG    +E     GH N+QT +K V +FGP +EYI+ G D  H +IW ++   LV L+  D  V N   +HP +P+LA  G++  VK+
Sbjct:   47 LVKSLNLYGRLD--GHEGCVNAVEFNSSGDLLVSGSDDRQVMLWNWASKAR-LLAYPSGHTDNIFQTKIMPFSGDCRIITSAGDGQVRLGLFREDGGVETALLG-------KHHGCVYKLAVEPGSPHIFYSSGEDGFIQHFDLR--SNSATKLFCCSSSTGKQTPTSKIGLTSIVIDCR--NPYYFAVGGSDEYARVYDIRKCQWVSDRNSDQPVNTFCP---------SHLIGSNNVHITGLAYSSD-SELLVSYNDELIYLFQKNEGMCSSPSSEGLKNINEPQVYSGHRNAQT-IKGVNFFGPNDEYILSGSDCGHIFIWKKKEAKLVRLMVGDQHVVNQLEAHPHIPILATCGLEKNVKI 386          
BLAST of NO14G01520 vs. NCBI_GenBank
Match: XP_014621552.1 (PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X1 [Glycine max] >KRH22948.1 hypothetical protein GLYMA_13G329300 [Glycine max])

HSP 1 Score: 147.9 bits (372), Expect = 1.400e-31
Identity = 105/370 (28.38%), Postives = 173/370 (46.76%), Query Frame = 0
Query:  121 VTKSFDCVGRASPLRHEGCVNAACWSENGQFLYTAGDDRLVQSWDVTRGFKHLREINTLHEGNIFGVQVVPGHPEL-LLTNSADGTLRIHDI--SSRGSERLVGTCDPHAVMHGFCFWDGGCSGGVGQVVLTAQGNGIVVKYDLREASSAGQAMYRRGSPSGQQLSVKAVVTPDIYNTAKGISPFMMCLGGHGPTLEVYDLRRLPCMAA----KPLQMYRPQGLPEFLSQTHLGMEEEVSVSGLAYSKDRGEILVSFQGDQIYGF--------NTADAACGEGGETHEAWSVGGHINSQTFLKSVTYFGPREEYIVCGDDLAHTWIWDRRSGMLVNLVCTDMSVANGCVSHPFLPMLACWGIDDTVKVLA 476
            + KS D  G+     HEGCVNA  ++  G  L +  DDR +  W+     K L    + H  NIF  +++P   +  ++T++ DG +R+  +    R    ++G        H  C +      G   +  ++  +G +  +DLR ++SA +      S    + ++  V    I    +  +P+   +GG      VYD+R+    +A    +P+  + P+         HL     V ++GLAYS   GE+LVS+  + IY F        + + A   +    HEA    GH N+QT +K V +FGP +EY++ G D  H +IW ++   LV L+  D  V N   +HP +P+LA  GI+  VK+ A
Sbjct:   47 LVKSLDLYGKLD--GHEGCVNAVEFNSTGDILVSGSDDRQIMFWNWESKTK-LFAYPSGHTDNIFQTKIMPFTDDCRIVTSAGDGQIRLGLLWEDGRVDTTMLG-------KHHGCVYKLAVEPGSAHIFYSSGEDGFIQHFDLR-SNSATKLFCCSSSIGNNKQTLSKVGLNSIVIDCR--NPYYFAIGGSDEYARVYDMRKCQWDSARNSDRPVNTFCPR---------HLIGSNNVHITGLAYS-SFGELLVSYNDELIYLFEKNMHSDSSPSSATSEDSKNIHEAQVYSGHRNAQT-IKGVNFFGPNDEYVLSGSDCGHIFIWKKKEAKLVRLMVGDQHVVNQHEAHPHIPILATCGIEKNVKIWA 392          
BLAST of NO14G01520 vs. NCBI_GenBank
Match: XP_014496569.1 (DDB1- and CUL4-associated factor 8 [Vigna radiata var. radiata])

HSP 1 Score: 147.1 bits (370), Expect = 2.400e-31
Identity = 104/370 (28.11%), Postives = 173/370 (46.76%), Query Frame = 0
Query:  121 VTKSFDCVGRASPLRHEGCVNAACWSENGQFLYTAGDDRLVQSWDVTRGFKHLREINTLHEGNIFGVQVVPGHPEL-LLTNSADGTLRIHDISSRG--SERLVGTCDPHAVMHGFCFWDGGCSGGVGQVVLTAQGNGIVVKYDLREASSAGQAMYRRGSPSGQQLSVKAVVTPDIYNTAKGISPFMMCLGGHGPTLEVYDLRRLPCMAAK----PLQMYRPQGLPEFLSQTHLGMEEEVSVSGLAYSKDRGEILVSFQGDQIYGFNTADAACGEGG-----ETHEAWSVGGHINSQTFLKSVTYFGPREEYIVCGDDLAHTWIWDRRSGMLVNLVCTDMSVANGCVSHPFLPMLACWGIDDTVKVLAVGG 479
            + KS +  G+     H GCVNA  ++  G  L +  DDR V  W+     + L    + H  NIF  +++P   +  ++T++ DG  R+      G     L+G        H  C +      G   +  ++  +G +  +DLR  S++   ++   S +G+Q   K  +T  + +     +P+   +GG      VYDLR+   ++++    P+  + P+         HL     V ++GLAYS +  E+LVS+  + IY F   +  C          T+E     GH N+QT +K V +FGP +EY++ G D  H +IW ++   LV L+  D  V N   +HP +P+LA  GI+  VK+ A  G
Sbjct:   47 LVKSLNLYGKLD--GHGGCVNAVEFNSTGDLLVSGSDDRQVMLWNWASKAR-LLAYPSGHTDNIFQTKIMPFSGDCRIITSAGDGQARLGLFREDGGVETTLLG-------KHHGCVYKLAVEPGSPHIFYSSGEDGFIQHFDLR--SNSATKLFCCYSSTGKQTPSKIGLTSIVIDCR---NPYYFAVGGSDEYARVYDLRKCQWVSSRNSDQPVSTFCPR---------HLIGSNNVHITGLAYSIN-SELLVSYNDELIYLFQKNEGMCSSPSSEDLKNTNEPQVYSGHRNAQT-IKGVNFFGPNDEYVLSGSDCGHIFIWKKKEAKLVRLMIGDQHVVNQLEAHPHIPILATCGIEKNVKIWAPQG 390          
BLAST of NO14G01520 vs. NCBI_GenBank
Match: XP_023637754.1 (DDB1- and CUL4-associated factor 8 isoform X2 [Capsella rubella])

HSP 1 Score: 146.0 bits (367), Expect = 5.400e-31
Identity = 109/383 (28.46%), Postives = 166/383 (43.34%), Query Frame = 0
Query:  111 PFEMRHQLAF---VTKSFDCVGRASPLRHEGCVNAACWSENGQFLYTAGDDRLVQSWDVTRGFKHLREINTLHEGNIFGVQVVP-GHPELLLTNSADGTLRIHDISSRGSERLVGTCDPHAVMHGFCFWDGGCSGGVGQVVLTAQGNGIVVKYDLREASSAGQAMY--------RRGSPSGQQLSVKAVVTPDIYNTAKGISPFMMCLGGHGPTLEVYDLRRLPCMAAKPLQMYRPQGLPEFLSQTHLGMEEEVSVSGLAYSKDRGEILVSFQGDQI--------YGFNTADAACGEGGETHEAWSVGGHINSQTFLKSVTYFGPREEYIVCGDDLAHTWIWDRRSGMLVNLVCTDMSVANGCVSHPFLPMLACWGIDDTVKV 474
            P  + H+++    + K  D  G+ +   HEGCVNA  ++  G  L +  DDR +  W+   G K L    + H  N+F  + +P      ++T+ ADG +R+  I   G          H  ++      G        V  +   +G V  +D+R ++SA   +Y        RR   S +       + P         +PF + +GG      VYD RR     A   +   P          HL     V ++GLAYSK  GE+LVS+  + I        YG +    +  +  E  E     GH N+QT +K V +FGP +EY+  G D  H +IW ++ G LV  +  D  V N   SHP +P LA  GI+ +VK+
Sbjct:   25 PSSVSHRISASEGIVKKLDLYGKLN--GHEGCVNALEFNSAGDILVSGSDDRQIMLWNWLNGIKTL-SYPSGHCENVFQTKFIPFTDDRTIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLPGD-----PNVFYSCGEDGFVQHFDIR-SNSATMVLYSSPFTQGCRRHHSSSRIRLNSIAIDPR--------NPFYLAVGGSDEYARVYDTRR--GQLAPVCRHILPDAPVNIFCPRHLRETNSVHITGLAYSK-AGELLVSYNDELIYLFEKNMGYGSSPVSISAEKLQEMEEPQVYTGHRNAQT-VKGVNFFGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMLGDRRVVNQLESHPCIPFLASCGIEKSVKL 386          
BLAST of NO14G01520 vs. NCBI_GenBank
Match: XP_003547044.1 (PREDICTED: DDB1- and CUL4-associated factor 8-like [Glycine max])

HSP 1 Score: 144.8 bits (364), Expect = 1.200e-30
Identity = 107/369 (29.00%), Postives = 169/369 (45.80%), Query Frame = 0
Query:  121 VTKSFDCVGRASPLRHEGCVNAACWSENGQFLYTAGDDRLVQSWD---VTRGFKHLREINTLHEGNIFGVQVVPGHPEL-LLTNSADGTLRIHDI--SSRGSERLVGTCDPHAVMHGFCFWDGGCSGGVGQVVLTAQGNGIVVKYDLREASSAGQAMYRRGSPSGQQLSVKAVVTPDIYNTAKGISPFMMCLGGHGPTLEVYDLRRLPCMAAKPLQMYRPQGLPEFLSQTHLGMEEEVSVSGLAYSKDRGEILVSFQGDQIYGF--------NTADAACGEGGETHEAWSVGGHINSQTFLKSVTYFGPREEYIVCGDDLAHTWIWDRRSGMLVNLVCTDMSVANGCVSHPFLPMLACWGIDDTVKVLA 476
            + KS D  G+     HEGCVNA  ++  G  L +  DDR V  W+    TR F +     + H  NIF  +++P   +  ++T++ DG +R+  +    R    ++G        H  C +      G   +  ++  +G +  +DLR ++SA +      S    + ++  V    I    +  +P+   +GG      VYD+R+  C         RP          HL     V ++GLAYS    E+LVS+  + IY F        + + A   +    HEA    GH N+QT +K V +FGP +EYI+ G D  H +IW ++   LV L+  D  V N   +HP +P+LA  GI+  VK+ A
Sbjct:   47 LVKSLDLYGKLD--GHEGCVNAVEFNSTGDLLVSGSDDRQVMFWNWASKTRLFAY----PSGHTDNIFQTKIIPFTDDCRIVTSAGDGQVRLGLLWEDGRVDTTMLG-------KHHGCVYKLAVEPGSAHIFYSSGEDGFIQHFDLR-SNSATKLFCCSSSIGNNKQTLSKVGLNSIVIDPR--NPYYFAIGGSDEYARVYDIRK--CQWGSARNSDRPVNT---FCPCHLIGSNNVHITGLAYS-SFSELLVSYNDELIYLFEKNVHSDSSPSSATSEDPKNIHEAQVYSGHRNAQT-IKGVNFFGPNDEYIMSGSDCGHIFIWKKKEAKLVRLMVGDQHVVNQLEAHPHIPILATCGIEKNVKIWA 392          
BLAST of NO14G01520 vs. NCBI_GenBank
Match: KHN33442.1 (DDB1- and CUL4-associated factor 8 [Glycine soja])

HSP 1 Score: 144.8 bits (364), Expect = 1.200e-30
Identity = 107/369 (29.00%), Postives = 169/369 (45.80%), Query Frame = 0
Query:  121 VTKSFDCVGRASPLRHEGCVNAACWSENGQFLYTAGDDRLVQSWD---VTRGFKHLREINTLHEGNIFGVQVVPGHPEL-LLTNSADGTLRIHDI--SSRGSERLVGTCDPHAVMHGFCFWDGGCSGGVGQVVLTAQGNGIVVKYDLREASSAGQAMYRRGSPSGQQLSVKAVVTPDIYNTAKGISPFMMCLGGHGPTLEVYDLRRLPCMAAKPLQMYRPQGLPEFLSQTHLGMEEEVSVSGLAYSKDRGEILVSFQGDQIYGF--------NTADAACGEGGETHEAWSVGGHINSQTFLKSVTYFGPREEYIVCGDDLAHTWIWDRRSGMLVNLVCTDMSVANGCVSHPFLPMLACWGIDDTVKVLA 476
            + KS D  G+     HEGCVNA  ++  G  L +  DDR V  W+    TR F +     + H  NIF  +++P   +  ++T++ DG +R+  +    R    ++G        H  C +      G   +  ++  +G +  +DLR ++SA +      S    + ++  V    I    +  +P+   +GG      VYD+R+  C         RP          HL     V ++GLAYS    E+LVS+  + IY F        + + A   +    HEA    GH N+QT +K V +FGP +EYI+ G D  H +IW ++   LV L+  D  V N   +HP +P+LA  GI+  VK+ A
Sbjct:   47 LVKSLDLYGKLD--GHEGCVNAVEFNSTGDLLVSGSDDRQVMFWNWASKTRLFAY----PSGHTDNIFQTKIIPFTDDCRIVTSAGDGQVRLGLLWEDGRVDTTMLG-------KHHGCVYKLAVEPGSAHIFYSSGEDGFIQHFDLR-SNSATKLFCCSSSIGNNKQTLSKVGLNSIVIDPR--NPYYFAIGGSDEYARVYDIRK--CQWGSARNSDRPVNT---FCPCHLIGSNNVHITGLAYS-SFSELLVSYNDELIYLFEKNVHSDSSPSSATSEDPKNIHEAQVYSGHRNAQT-IKGVNFFGPNDEYIMSGSDCGHIFIWKKKEAKLVRLMVGDQHVVNQLEAHPHIPILATCGIEKNVKIWA 392          
BLAST of NO14G01520 vs. NCBI_GenBank
Match: EJK68838.1 (hypothetical protein THAOC_09949 [Thalassiosira oceanica])

HSP 1 Score: 144.4 bits (363), Expect = 1.600e-30
Identity = 102/347 (29.39%), Postives = 157/347 (45.24%), Query Frame = 0
Query:  176 INTLHEGNIFGVQVVPGHPELLLTNSADGTLRIHDI--------SSRGSERLVGTCDPH----------------------AVMHGFCFWDGGCSGGVGQVVLTAQGNGIVVKYDLREASSAGQAMYRRGSPSGQQLSVKAVVTPDIYNTAKGISPFM-------MCLGGHGPTLEVYDLRRLPCMAAKPLQMYRPQGLPEFLSQTHLGMEEEVSVSGLAYSKDRGEILVSFQGDQIYGFNTADAA------------CGEGGETHEAWSVGGHINSQTFLKSVTYFGPREEYIVCGDDLAHTWIWDRRSGMLVNLVCTDMSVANGCVSHPFLPMLACWGIDDTVKV 474
            I++ H GN+F    VP  P  + T +ADG LR+ D+        + RG    + +   H                       +    CF+D    G VG +V + +G   ++ +DLR  S+  Q               +A + P++  T K   P+        +  GG   T+ +YDLR L    ++ +Q YRP+ L            ++ +VSG+  SKD+ EI+VS++ D IY F     A            C +     E  + GGH+N  TFLKS  + GPR+E+I  G D  H WI+++RSG + + + +D S ANG + HP LP    +GID T K+
Sbjct:  554 ISSGHRGNVFHCTPVPNSPGKVATCAADGQLRLADVERHSMLSSNGRGRSDSIASALSHPEASTIVMDLDSFESDSSGFSRTMCFSHCFFD----GNVG-LVCSERG---LLHFDLR-LSARNQR--------------RASLVPELSRTCKACYPWQTGGESAYVFAGGTTSTVGLYDLRMLGDTRSQVVQTYRPRAL----------RSKQAAVSGIDLSKDKREIIVSYEADHIYRFPCFPEAPAFGPSLEDINECSKDKPLSELAAYGGHLNRLTFLKSAKFAGPRDEFICTGSDSGHCWIYEKRSGAVASFIKSDNSTANGILPHPELPFFLTYGIDSTAKL 867          
The following BLAST results are available for this feature:
BLAST of NO14G01520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24660.19.800e-18246.57Tetratricopeptide-like helical protein [Nannochlor... [more]
KOM44228.12.900e-3228.11hypothetical protein LR48_Vigan05g183300, partial ... [more]
XP_017423106.12.900e-3228.11PREDICTED: DDB1- and CUL4-associated factor 8 [Vig... [more]
XP_007150237.16.400e-3228.49hypothetical protein PHAVU_005G137900g [Phaseolus ... [more]
XP_014621552.11.400e-3128.38PREDICTED: DDB1- and CUL4-associated factor 8-like... [more]
XP_014496569.12.400e-3128.11DDB1- and CUL4-associated factor 8 [Vigna radiata ... [more]
XP_023637754.15.400e-3128.46DDB1- and CUL4-associated factor 8 isoform X2 [Cap... [more]
XP_003547044.11.200e-3029.00PREDICTED: DDB1- and CUL4-associated factor 8-like... [more]
KHN33442.11.200e-3029.00DDB1- and CUL4-associated factor 8 [Glycine soja][more]
EJK68838.11.600e-3029.39hypothetical protein THAOC_09949 [Thalassiosira oc... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002349NSK002349Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01520.1NO14G01520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590104gene_5721Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100055g32gene5818Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01520.1NO14G01520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01520 ID=NO14G01520|Name=NO14G01520|organism=Nannochloropsis oceanica|type=gene|length=2886bp
ATTGAAGCGATCGTCGCTGCCATCTCAGACAGGTGGGGGGTGGGGAGGTC
AGGTCGGGCTCTGTTTGGATTAAACGTGTGGTGCCCACCACAGGCTATTG
GATGCATCAGACCAGACAGCAACAACCAGTCCGAAGATGTGGCCTTGTCG
GGGGCATCAGAAAGGGGATTGAAGCGATCGTCGCTGCCATATCAGACAGG
ACGAAGACCCCTGCTACTCACACACACAGGAGAGGTGACGTTGGCCAGGC
CATGGACGGCGATGGAACGCCCACAATCCGGACATGGGAGGCGTTTGTCG
ATTCTCCTGCCACCCTCTTTCAGCCGCACCATCACCCCGCCCATCTCCTC
CGGCAGCGCGAGGAACATGGCCGGCTGCGAACCCGCACCACGGTCCCCGC
TCCCGCATCCTACTACACTCCGGGCTTTACGCCTTTTGAAATGCGCCATC
AGTTGGCCTTCGTGACGAAAAGCTTCGACTGTGTTGGTCGTGCCTCTCCA
CTGCGGCACGAGGGCTGCGTCAATGCTGCTTGTTGGAGCGAGAATGGCCA
ATTTCTCTACACAGCGGGCGACGACAGGCTAGTCCAATCATGGGACGTCA
CTCGGGGATTCAAGCATCTACGAGAAATTAATACACTCCACGAAGGAAAT
ATATTTGGCGTTCAAGTCGTCCCTGGCCATCCTGAGCTCCTGCTGACAAA
TTCAGCGGACGGAACGCTACGGATTCACGATATTTCTTCTCGCGGGTCCG
AGCGCTTAGTGGGGACCTGTGATCCTCACGCAGTGATGCACGGATTTTGT
TTCTGGGACGGAGGCTGCAGCGGAGGAGTGGGTCAAGTTGTCTTAACGGC
ACAGGGCAATGGTATTGTGGTGAAATACGACTTGCGGGAGGCAAGTAGCG
CTGGCCAAGCTATGTATCGTCGTGGATCGCCAAGCGGCCAGCAGCTGTCC
GTGAAGGCCGTCGTCACGCCCGACATTTACAACACCGCCAAGGGTATCTC
GCCTTTCATGATGTGCTTGGGTGGTCACGGTCCTACTCTAGAAGTCTACG
ACCTACGTCGTCTGCCCTGCATGGCAGCCAAGCCACTCCAGATGTACCGC
CCGCAGGGCCTACCAGAATTCCTGAGTCAGACACACCTCGGGATGGAGGA
AGAGGTGAGCGTAAGTGGCCTGGCTTATTCCAAGGACCGCGGAGAAATTC
TGGTATCTTTTCAAGGTGACCAGATATATGGCTTCAACACTGCTGACGCT
GCCTGTGGCGAGGGAGGGGAGACACACGAAGCCTGGTCTGTAGGTGGCCA
CATCAATTCGCAAACGTTCCTCAAGTCTGTCACCTATTTCGGACCGCGTG
AAGAGTACATTGTGTGTGGCGATGATTTGGCGCACACGTGGATTTGGGAC
CGGAGAAGCGGGATGCTCGTGAATTTGGTCTGCACTGACATGTCGGTCGC
GAATGGGTGTGTGTCTCATCCCTTTTTGCCCATGCTAGCTTGCTGGGGGA
TAGATGACACGGTCAAAGTTTTGGCTGTGGGGGGTCGTTATTCTTCTTTC
AAAAAGGATGAGAGTGTGGACAAAGCGCTGGAAGAAGATGATAGCGCAGC
GGATACATGTACAACACGACAGGGAATGGTGCGGCGGAGGCTGCGGAGGG
GAAGAGGAGGAAATGAAGAACGAGGGGGAGGAGAACGACAAGCACATCCA
TGGGATATGGAATGGTTGCAGTCGCTTCCGAGTATATATTTTGGGACCGT
TCTGGAGACTGGGATGGCAATGGGGGTGTTCAGCAATCCTGGAAAGCCCA
GGATGGTCTATGATCACGAGCGCTATCGCCAGCACGTCAAGCGCATCCGT
CAATTTATGTCCGAGCCCTGCGACCATCTGCCTGATTACCCGACTGACTG
TAGCAATTCTTTTACTTTAGATGAGCTAGAGGGCTTGCTCCTGCAGGTAA
AGGAAATGGGGAATTTCTTCTTCAAAGCCAAACAATACGGACGTGCTTCG
CGCTGTTACAAGAAGATTCAAATGTGGCTCTATTCTTTGGCTGGGATGAG
AGTGAAGATTTATAAGATGCAGGTGGAAGCGTCTGCTTTGGGAGAAAGGG
ACCAGTTTGATCGGCTTGAATTTCCGGTGGAGTCGACGTTGTCGCCGTCG
GTGCAGCAGCACACACGGTGTCAGGCTGTGGTAGCCAAGCACCTGAAGGG
GACATCTGGACCTGTGGGCGGGGAAGCATTAGCGGAGGATAGAACAGGCG
AGGAAGTGAAAGACGTTATGTTCGCACGTCTGCTTAATCTGCTTGTGACA
GTTCACTTGAATATGGCCATGACGGCCCGGGCACTTGGACACCACCTGGC
TGCTATTTCTTTGTGCACCTCTGTCATCCGAATCAAACCACGGGAAGCCA
AGGCGTTCTATCTCAGGGGTGTCGCGGCATTGGAGCTGGGGGAGAATTTC
GAAACTACTGTCCAGGACCTCGTGAAGGCTCGTGATCTAGCGCCTGGGGA
CGCACTCATCGCTCGCAAGCTGGCTGAGGCGAGGCGGCTGCTCAAGGCGC
AGCAAGCCCGCGAGTTCCGAGCTTATGCCACCTTCTTTTCGTTGGCACCA
GATGAAGAGGAAGAGGATATGAGCGGAGCAAGACAGGGAGAATGTTGAGG
AAGGCTAAGGGAACCATTTCCAATACAAGAAAGCTTATGGATGGGGGAAG
ATGTGCGTTGTTTTTGTTATTAATAGCATGAGTTATACAAAGTGGGAGGG
AATAGGCAAGAGTTGGACAAGGCTGGAATCGAGGACAGGGCACGGGTTTG
ACACACCCGGGGCATACGAGACTGTAAATAAGATGTACCGACCCCAGGCA
CAAAGCTAGATAAAGTGAATATGAGCCTTATGACCC
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protein sequence of NO14G01520.1

>NO14G01520.1-protein ID=NO14G01520.1-protein|Name=NO14G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=849bp
MHQTRQQQPVRRCGLVGGIRKGIEAIVAAISDRTKTPATHTHRRGDVGQA
MDGDGTPTIRTWEAFVDSPATLFQPHHHPAHLLRQREEHGRLRTRTTVPA
PASYYTPGFTPFEMRHQLAFVTKSFDCVGRASPLRHEGCVNAACWSENGQ
FLYTAGDDRLVQSWDVTRGFKHLREINTLHEGNIFGVQVVPGHPELLLTN
SADGTLRIHDISSRGSERLVGTCDPHAVMHGFCFWDGGCSGGVGQVVLTA
QGNGIVVKYDLREASSAGQAMYRRGSPSGQQLSVKAVVTPDIYNTAKGIS
PFMMCLGGHGPTLEVYDLRRLPCMAAKPLQMYRPQGLPEFLSQTHLGMEE
EVSVSGLAYSKDRGEILVSFQGDQIYGFNTADAACGEGGETHEAWSVGGH
INSQTFLKSVTYFGPREEYIVCGDDLAHTWIWDRRSGMLVNLVCTDMSVA
NGCVSHPFLPMLACWGIDDTVKVLAVGGRYSSFKKDESVDKALEEDDSAA
DTCTTRQGMVRRRLRRGRGGNEERGGGERQAHPWDMEWLQSLPSIYFGTV
LETGMAMGVFSNPGKPRMVYDHERYRQHVKRIRQFMSEPCDHLPDYPTDC
SNSFTLDELEGLLLQVKEMGNFFFKAKQYGRASRCYKKIQMWLYSLAGMR
VKIYKMQVEASALGERDQFDRLEFPVESTLSPSVQQHTRCQAVVAKHLKG
TSGPVGGEALAEDRTGEEVKDVMFARLLNLLVTVHLNMAMTARALGHHLA
AISLCTSVIRIKPREAKAFYLRGVAALELGENFETTVQDLVKARDLAPGD
ALIARKLAEARRLLKAQQAREFRAYATFFSLAPDEEEEDMSGARQGEC*
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Synonyms
Publications