NO14G01390, NO14G01390 (gene) Nannochloropsis oceanica

Overview
NameNO14G01390
Unique NameNO14G01390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1506
Alignment locationchr14:444500..446005 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:444500..446005 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G01390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002337NSK002337Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01390.1NO14G01390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590064gene_5708Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100123g3gene5810Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01390.1NO14G01390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01390 ID=NO14G01390|Name=NO14G01390|organism=Nannochloropsis oceanica|type=gene|length=1506bp
ATGGACGACCCAGAGGCGCTGGTACCCTTTTTGCCCTCCTCCTTCTCGCT
GCCCACCGCTCCCTCCTCCATATCATCCTCCTCATCCTCCCCCTCTTACT
CCTCCTCCTCGTCGCTTTCCCCTCATATCTCCCCCTCCAATGTTTCTGTG
TCGTCGCTACCATGTCGCAACCACTACTATCGTCAGTCTCCACTATCATC
GTACGTCCAGGTGGAGGAAGGCACGCTCCGCCGACATAACGCTCCTCCAC
CTTTCTCTTCTTCGGCTGCCTCGCCATACTCCCTCTCCCACCTCCTCTCC
GACGCATTCGAATGGTTTAAAGAGGTAGTCATCTTCGCTCAGAAGGTATG
GATGCCTCTTATCTTCTTTGGTGTAATAGGCTGCTGTCATTTGCTAGGGT
GGGCAATGCTTGTCTACAGCGCTTTGGCCATCTGGGGACCCACGACACCT
ACAGCTGCTGCCGCTGCCGCTTCATCGCCATCAGTGTTAGCAGCAACATC
ATCGGAGGATGAAGCCATGCTACAAATGAGACCGCCGCAATTCATTTCGG
GCCCCGCATCCTTGGCTGATTGGCAGAGCTTAGGTTTTATCATATATATG
ACCTCTGTGTTTGCCTCCTTTTTGTGGTTGCAACACTTTGTGAGGACACC
CCAGGAGCAGCCAGTGGTGAgtgaggagcgacggtccagcgccaggagct
tggaaatattggctgtttgagcagttcggggagagctgaagaaaaagatg
atgatgatgatgaacaagaattacaagagcaaaaaccagGAGACGAAGGA
GGAGCAGCAGCAGCATCAGCAGTAGCAGAAGCGGCAGCGGCAGCAGCAGC
AGCAGCAGGGACAATAGAAGCAGTAGGAAGAGGAAATGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGCAAAAGAAGGAAGGGCAAGAGA
TTGAGAGGACTCGCCCTGTCAATGGACACCGTTAGCAAGAGGCGACCAAT
AGACAACGAACTGGAGAGCAACCTGAAAATTGCGTTGATAGCCTTTTTGA
GTTTCGTCCGCAGgtgtgtatgtaaaggcgatatctatgggtgatttacc
gctcaaatcacaaccacttgtagCCAGGGTTGTGACGAAGGTTTCTTTTG
GGAAGGTAGCCGCAGCCCACCATTTACTCCAAGCTATTTCAACTTGGgta
cgtctatcggtaagaatctggaagagaactgtgcggaaaagctggactcg
tggagtgcaagcacactggatacattaatattcaaattaaaagtgccaag
gattgaaaaacaattgattgttcgatatggcgaaatggcgaaaattggca
ttatttcgctcttctctcactcctcctcatgagagtacctttccgagtgt
ggacaccaaccttcgcatgtcattagAGTTGGGGTTGGAGAAACTTATTC
TTATCTCCAAGGCCCGTGTATATAAGACGTTTCTTGATCACATGAGCAAG
TTTTAG
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protein sequence of NO14G01390.1

>NO14G01390.1-protein ID=NO14G01390.1-protein|Name=NO14G01390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=366bp
MDDPEALVPFLPSSFSLPTAPSSISSSSSSPSYSSSSSLSPHISPSNVSV
SSLPCRNHYYRQSPLSSYVQVEEGTLRRHNAPPPFSSSAASPYSLSHLLS
DAFEWFKEVVIFAQKVWMPLIFFGVIGCCHLLGWAMLVYSALAIWGPTTP
TAAAAAASSPSVLAATSSEDEAMLQMRPPQFISGPASLADWQSLGFIIYM
TSVFASFLWLQHFVRTPQEQPVVRDEGGAAAASAVAEAAAAAAAAAGTIE
AVGRGNGGGGGGGGGGGGGGKRRKGKRLRGLALSMDTVSKRRPIDNELES
NLKIALIAFLSFVRSQGCDEGFFWEGSRSPPFTPSYFNLELGLEKLILIS
KARVYKTFLDHMSKF*
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Synonyms
Publications