NO14G01270, NO14G01270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G01270 vs. NCBI_GenBank
Match: XP_005853683.1 (mitochondrial inner membrane protease subunit 1 [Nannochloropsis gaditana CCMP526] >EKU22677.1 mitochondrial inner membrane protease subunit 1 [Nannochloropsis gaditana CCMP526] >EWM24682.1 mitochondrial inner membrane protease subunit 1 [Nannochloropsis gaditana]) HSP 1 Score: 382.1 bits (980), Expect = 1.100e-102 Identity = 177/199 (88.94%), Postives = 189/199 (94.97%), Query Frame = 0 Query: 1 MAWRGAFRSFFTRARTRYMRGSAELLDETRYNVVDLVKFSCTLYCLHDYVADVTALAGPSMLPTFNEAGDIVVVNCLHVKLSRPLEKGDIVIARSPTNPGNTVCKRVLGLPGDRILIQPQFWYQQEQVLEIPPGMLWLEGDNPFNSTDSRSYGPVPMALVKGLVVFKLYPLLEFGPLPRTYRKPGVIYPKLDMETGISR 200 MAWRGAFRSFF+RAR RYMR SAELLDETRYNVVDLVKFSCTLYCLH+YVADVTALAGPSMLPTFNEAGDIVVV+CLHVKL RPL+KGDIVIARSP+NP NTVCKRVLGLPGDRILIQPQ+WYQQEQVL++PPGMLWLEGDNPFNSTDSR+YGPVPMALVKGLV FKLYPL EFGPLPRT+R+PG YPKLD ETGI + Sbjct: 1 MAWRGAFRSFFSRARARYMRSSAELLDETRYNVVDLVKFSCTLYCLHEYVADVTALAGPSMLPTFNEAGDIVVVDCLHVKLGRPLQKGDIVIARSPSNPSNTVCKRVLGLPGDRILIQPQYWYQQEQVLQVPPGMLWLEGDNPFNSTDSRTYGPVPMALVKGLVAFKLYPLHEFGPLPRTFRRPGARYPKLDRETGIRK 199
BLAST of NO14G01270 vs. NCBI_GenBank
Match: GBG29493.1 (Mitochondrial inner membrane protease subunit 1 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 172.2 bits (435), Expect = 1.700e-39 Identity = 79/147 (53.74%), Postives = 110/147 (74.83%), Query Frame = 0 Query: 31 YNVVDLVKFSCTLYCLHDYVADVTALAGPSMLPTFNEAGDIVVVNCLHVKLSRPLEKGDIVIARSPTNPGNTVCKRVLGLPGDRILIQPQFWYQQEQVLEIPPGMLWLEGDNPFNSTDSRSYGPVPMALVKGLVVFKLYPLLEFGPL 178 +N L+KF LY ++ YV +VT GPSMLPTF+ AGDIV+V+ + L +EKGDIVIA+SPTNP TVCKRV G+PG+R+ + ++ Y++++++++P G +WLEGDNP NSTDSR+YG VPM L+KG V F+L+PL GP+ Sbjct: 129 HNSWKLLKFGSFLYVVNTYVFEVTMCVGPSMLPTFSSAGDIVLVDRIS-PLRLKIEKGDIVIAQSPTNPRQTVCKRVKGMPGERVRVAQRYSYERDRIVKVPKGRVWLEGDNPKNSTDSRAYGAVPMGLIKGRVFFRLWPLTAIGPV 274
BLAST of NO14G01270 vs. NCBI_GenBank
Match: GAQ84474.1 (Peptidase S24/S26A/S26B/S26C family protein [Klebsormidium nitens]) HSP 1 Score: 151.8 bits (382), Expect = 2.300e-33 Identity = 71/140 (50.71%), Postives = 94/140 (67.14%), Query Frame = 0 Query: 36 LVKFSCTLYCLHDYVADVTALAGPSMLPTFNEAGDIVVVNCLHVKLSRPLEKGDIVIARSPTNPGNTVCKRVLGLPGDRILIQPQFWYQQEQVLEIPPGMLWLEGDNPFNSTDSRSYGPVPMALVKGLVVFKLYPLLEFG 176 +V+F +YC YV DVT GPSMLP+FN G+I+ V + +L R L+ GD+V A+SP NP +CKR+LGL GDRI + P +++ +P G +WL+GDN F S DSR YGPVP ALVKG VVFK++P +FG Sbjct: 19 VVQFGSFIYCFGTYVMDVTTCVGPSMLPSFNAEGNIIFVEHISPRLGR-LKAGDVVTAQSPRNPNAVICKRILGLEGDRIRVPPTMPRDSIRLVTVPKGHVWLQGDNQFVSRDSREYGPVPAALVKGKVVFKIWPPSQFG 157
BLAST of NO14G01270 vs. NCBI_GenBank
Match: XP_002507898.1 (predicted protein [Micromonas commoda] >ACO69156.1 predicted protein [Micromonas commoda]) HSP 1 Score: 147.1 bits (370), Expect = 5.700e-32 Identity = 71/139 (51.08%), Postives = 94/139 (67.63%), Query Frame = 0 Query: 41 CTLYCLHDYVADVTALAGPSMLPTFNEAGDIVVVNCLHVKLSRPLEKGDIVIARSPTNPGNTVCKRVLGLPGDRILIQPQFWYQQEQVLEIPPGMLWLEGDNPFNSTDSRSYGPVPMALVKGLVVFKLYPLLEFGPLPR 180 C + +H+Y VT GPSMLPTFN +GD V+V L V ++ + +GDIVIA+SPTNP +TVCKRVLG GD I + + Q +E+PPG +WL+GDN NSTDSR YGPVP +++G V K++PL E G + R Sbjct: 3 CLVNVIHNYGVHVTMCLGPSMLPTFNRSGDFVLVEQLSV-MTDNIRRGDIVIAKSPTNPRHTVCKRVLGRGGDVIAVPKAGSFGGTQRVEVPPGHIWLQGDNKDNSTDSRDYGPVPFGMLRGKVFLKVWPLSELGYVAR 140
BLAST of NO14G01270 vs. NCBI_GenBank
Match: EXX54857.1 (Imp1p [Rhizophagus irregularis DAOM 197198w] >GBC48621.1 signal peptidase I [Rhizophagus irregularis DAOM 181602] >PKC15634.1 mitochondrial inner membrane protease subunit 1 [Rhizophagus irregularis] >PKC64365.1 mitochondrial inner membrane protease subunit 1 [Rhizophagus irregularis] >PKY24660.1 mitochondrial inner membrane protease subunit 1 [Rhizophagus irregularis] >PKY54988.1 mitochondrial inner membrane protease subunit 1 [Rhizophagus irregularis] >POG65028.1 hypothetical protein GLOIN_2v1670191 [Rhizophagus irregularis DAOM 181602=DAOM 197198]) HSP 1 Score: 146.4 bits (368), Expect = 9.700e-32 Identity = 70/134 (52.24%), Postives = 93/134 (69.40%), Query Frame = 0 Query: 37 VKFSCTLYCLHDYVADVTALAGPSMLPTFNEAGDIVVVNCLHVKLSRPLEKGDIVIARSPTNPGNTVCKRVLGLPGDRILIQPQFWYQQEQVLEIPPGMLWLEGDNPFNSTDSRSYGPVPMALVKGLVVFKLYP 171 +KF+C ++ + ++V +VT GPSMLPTFN GDIVV+ KL R LE GD+V+ SPTNP VCKR+LG+PGDRI I P + + +P G +WL+GDN NSTDSRSYGPVP AL++G V +++P Sbjct: 19 IKFACFVHLIGEHVTEVTMCIGPSMLPTFNMIGDIVVLEHFSPKLKR-LEIGDVVVCISPTNPWRAVCKRILGMPGDRICIDPT--VINRKYIIVPRGHVWLQGDNMSNSTDSRSYGPVPYALIRGRVFARIWP 149
BLAST of NO14G01270 vs. NCBI_GenBank
Match: XP_016611042.1 (hypothetical protein SPPG_08982 [Spizellomyces punctatus DAOM BR117] >KND03003.1 hypothetical protein SPPG_08982 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 146.0 bits (367), Expect = 1.300e-31 Identity = 74/164 (45.12%), Postives = 102/164 (62.20%), Query Frame = 0 Query: 37 VKFSCTLYCLHDYVADVTALAGPSMLPTFNEAGDIVVVNCLHV-KLSRPLEKGDIVIARSPTNPGNTVCKRVLGLPGDRILIQPQFWYQQEQVLEIPPGMLWLEGDNPFNSTDSRSYGPVPMALVKGLVVFKLYPLLEFGPLPRTYRKPGVIYPKLDMETGISR 200 V+ C + +YVA+VT GPSMLPTFN GDIVVV HV + R L+ GD+V+ SPTNP +CKRVLGLPGD + + P + + + +PPG +WL+GDN NSTDSR YGPV + L++G V+ K++P E+ R + + P +D E + R Sbjct: 20 VQGGCVMLLFQNYVAEVTMCIGPSMLPTFNIVGDIVVVE--HVSRHYRKLDLGDVVVCVSPTNPQKAICKRVLGLPGDFVCVDPTL--SERRYITVPPGHIWLQGDNFTNSTDSRKYGPVSLGLLRGRVLCKIWPNFEW---IRNGFEEQISQPSMDRELVVER 176
BLAST of NO14G01270 vs. NCBI_GenBank
Match: PTQ49663.1 (hypothetical protein MARPO_0002s0138 [Marchantia polymorpha]) HSP 1 Score: 145.6 bits (366), Expect = 1.700e-31 Identity = 71/153 (46.41%), Postives = 100/153 (65.36%), Query Frame = 0 Query: 25 LLDETRYNVVDLVKFSCTLYCLHDYVADVTALAGPSMLPTFNEAGDIVVVNCLHVKLSRPLEKGDIVIARSPTNPGNTVCKRVLGLPGDRILIQPQFWYQQEQVLEIPPGMLWLEGDNPFNSTDSRSYGPVPMALVKGLVVFKLYPLLEFGPL 178 L+ E V +F C L+ ++V V GPSMLPTFN AGDI+++ L VK + + GD+V+ARSP NP VCKRVLGL GDR+++ P + + +P G +WL+GDN +NSTDSR YGPVP AL++G V ++++PL +GP+ Sbjct: 7 LMQEAWERSVVFTQFLCFLHVFSNHVCQVHQCLGPSMLPTFNVAGDILLLEHLSVKFEK-VRSGDVVMARSPVNPRVMVCKRVLGLEGDRVVVLPTNSKGHIRHVVVPKGHVWLQGDNIYNSTDSRHYGPVPYALIQGKVCYRIWPLEGWGPV 158
BLAST of NO14G01270 vs. NCBI_GenBank
Match: XP_003058067.1 (predicted protein, partial [Micromonas pusilla CCMP1545] >EEH58018.1 predicted protein, partial [Micromonas pusilla CCMP1545]) HSP 1 Score: 140.6 bits (353), Expect = 5.300e-30 Identity = 69/136 (50.74%), Postives = 92/136 (67.65%), Query Frame = 0 Query: 41 CTLYCLHDYVADVTALAGPSMLPTFNEAGDIVVVNCLHVKLSR-PLEKGDIVIARSPTNPGNTVCKRVLGLPGDRILIQPQFWYQQEQVLEIPPGMLWLEGDNPFNSTDSRSYGPVPMALVKGLVVFKLYPLLEFG 176 C + +H+Y +VT GPSMLPTFN +GD+V++ HV + R +E GD+VIA+SP+NP +TVCKRVLG GD I + + +E+P G LWL+GDN NSTDSR YGPVP AL++G V K++P E G Sbjct: 1 CLVSVVHNYGVEVTMCLGPSMLPTFNRSGDVVLME--HVSVMRNAIETGDVVIAKSPSNPRHTVCKRVLGRGGDVIHVPKAGHFGGTMRVEVPTGHLWLQGDNKDNSTDSRDYGPVPYALLRGKVFVKVWPPSEIG 134
BLAST of NO14G01270 vs. NCBI_GenBank
Match: XP_005827897.1 (hypothetical protein GUITHDRAFT_88558 [Guillardia theta CCMP2712] >EKX40917.1 hypothetical protein GUITHDRAFT_88558 [Guillardia theta CCMP2712]) HSP 1 Score: 140.6 bits (353), Expect = 5.300e-30 Identity = 67/142 (47.18%), Postives = 97/142 (68.31%), Query Frame = 0 Query: 36 LVKFSCTLYCLHDYVADVTALAGPSMLPTFNEAGDIVVVNCLHVKLSRPLEKGDIVIARSPTNPGNTVCKRVLGL--PGDRILIQPQFWYQQEQVLEIPPGMLWLEGDNPFNSTDSRSYGPVPMALVKGLVVFKLYPLLEFG 176 L++F C L+C H+++ DVT GPSM+PTFN GD+V+V + + L GD+V+A+SPTNP TVCKR+ G+ G++ +P V+++P G +WL+GDN NSTDSR YGPVP+AL++G V +K++PL E G Sbjct: 11 LLQFGCLLHCFHEHILDVTICIGPSMIPTFNLEGDVVLVEFWTTRRQK-LVNGDVVVAKSPTNPKQTVCKRICGMRREGEK---RPDI--NPHGVVQVPDGHVWLQGDNLPNSTDSRHYGPVPLALIRGKVFYKIWPLGEAG 146
BLAST of NO14G01270 vs. NCBI_GenBank
Match: KNE55016.1 (hypothetical protein AMAG_00953 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 140.6 bits (353), Expect = 5.300e-30 Identity = 65/140 (46.43%), Postives = 93/140 (66.43%), Query Frame = 0 Query: 31 YNVVDLVKFSCTLYCLHDYVADVTALAGPSMLPTFNEAGDIVVVNCLHVKLSRPLEKGDIVIARSPTNPGNTVCKRVLGLPGDRILIQPQFWYQQEQVLEIPPGMLWLEGDNPFNSTDSRSYGPVPMALVKGLVVFKLYP 171 ++ + VK ++ + YVA+VT GPSMLPTFN GD V+++ + +L R +E GD+V+A S +NP VCKR+ G+PGD I + P + L++P G +WL GDN NSTDSR+YGPVP ALVKG V+ +++P Sbjct: 15 HHALFFVKLGAFIHVFNSYVAEVTMCMGPSMLPTFNMLGDFVLIDKISPRLGR-IELGDVVVATSLSNPDRVVCKRITGMPGDVICVDPSHDAASREYLKVPRGHVWLSGDNFSNSTDSRNYGPVPFALVKGKVLARIWP 153 The following BLAST results are available for this feature:
BLAST of NO14G01270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G01270 ID=NO14G01270|Name=NO14G01270|organism=Nannochloropsis oceanica|type=gene|length=600bpback to top protein sequence of NO14G01270.1 >NO14G01270.1-protein ID=NO14G01270.1-protein|Name=NO14G01270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=200bpback to top Synonyms
Publications
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