NO14G01200, NO14G01200 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G01200 vs. NCBI_GenBank
Match: EWM24690.1 (dihydrolipoamide s-succinyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 143.3 bits (360), Expect = 1.200e-30 Identity = 77/93 (82.80%), Postives = 83/93 (89.25%), Query Frame = 0
Query: 66 TRAFHASTSSRMMAEVVMTVPSMGDSITEGTIKSWEKNVGDVVALDDVVVVIETDKVSVDIRAKDKGILVEQFAAVDDNVDVGANLLKIDTSA 159
TRAFH S S R MAEVVMTVPSMGDSITEGTI+SWEK VG+ VALDDVVVVIETDKVSVDIRA + G+LVEQ+AAVDDNV+VGA LLKIDT A
Sbjct: 61 TRAFHGSVSLR-MAEVVMTVPSMGDSITEGTIRSWEKKVGEAVALDDVVVVIETDKVSVDIRASNSGVLVEQYAAVDDNVEVGAKLLKIDTQA 152
BLAST of NO14G01200 vs. NCBI_GenBank
Match: CBJ32042.1 (dihydrolipoamide succinyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 107.8 bits (268), Expect = 5.500e-20 Identity = 73/210 (34.76%), Postives = 109/210 (51.90%), Query Frame = 0
Query: 80 EVVMTVPSMGDSITEGTIKSWEKNVGDVVALDDVVVVIETDKVSVDIRAKDKGILVEQFAAVDDNVDVGANLLKID---TSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVQRKPLIKFLGKRSLIGKDIPAAASAAQMARTGAAATGPAPGRYEDLKSTPGSKTFDEM--PAMFGRPSLSEKEIEAIESGGA 285
E VM +P +GDSI+EGT+ W K+VGD V+ D+V+ V+ETDKVSVD+++ G++V+ FAAVDD V+VG L ID S + + KPLIKF+GKR+L+ + + G P R+ + +PG+ F ++ AMFGRP++SE+E++A++SGGA
Sbjct: 90 EHVMELPGLGDSISEGTVVEWRKSVGDEVSEDEVIAVVETDKVSVDVQSTHVGVVVKLFAAVDDVVEVGKPLCTIDGDEASVVKARVQAQQDEEDANAPPPKLKKPSLEDAMAGAFMAGADFVAPMKKRHKPLIKFVGKRALLTE------------KKGKKEEDGLPARH---RHSPGALDFSQIVGGAMFGRPAMSEEEMDAVDSGGA 284
BLAST of NO14G01200 vs. NCBI_GenBank
Match: XP_008607563.1 (hypothetical protein SDRG_03703 [Saprolegnia diclina VS20] >EQC38739.1 hypothetical protein SDRG_03703 [Saprolegnia diclina VS20]) HSP 1 Score: 100.9 bits (250), Expect = 6.700e-18 Identity = 105/221 (47.51%), Postives = 135/221 (61.09%), Query Frame = 0
Query: 66 TRAFHASTSSRMMAEVVMTVPSMGDSITEGTIKSWEKNVGDVVALDDVVVVIETDKVSVDIRAKDKGILVEQFAAVDDNVDVGANLLKIDTSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVQRKPLIKFLGKRSLIGKDIPAAASAAQMARTGAAATGPAPGRYEDLKSTPGSKTFDEMPAMFGRPSLSEKEIEAIESGGATL 287
+RA H S++ RMM E ++ VPSMGDSI+EGT+ +K +G V +D+VV+V+ETDKVSVD+ + G LV+QF +D +V+VG +L ID XXXXXXXXXXXXXXXXXXXXXXXXXXXXX + R P IKFLGKRSL+ PAA SAA A + S+ F +P+ F R +S+KEI AI + + L
Sbjct: 52 SRAIH-SSAMRMMPEHIVKVPSMGDSISEGTVVDLKKQIGQHVEIDEVVMVLETDKVSVDVMSPVAGTLVKQFVELDQDVEVGRDLFVIDGDV---------KATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHHDGARVPRIKFLGKRSLLAHPAPAAKSAAPSTLVVAPS------------SSADVLPFGNLPSQFARKPISKKEIHAINTAASFL 250
BLAST of NO14G01200 vs. NCBI_GenBank
Match: XP_012199579.1 (hypothetical protein SPRG_05470 [Saprolegnia parasitica CBS 223.65] >KDO29513.1 hypothetical protein SPRG_05470 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 96.7 bits (239), Expect = 1.300e-16 Identity = 100/221 (45.25%), Postives = 135/221 (61.09%), Query Frame = 0
Query: 66 TRAFHASTSSRMMAEVVMTVPSMGDSITEGTIKSWEKNVGDVVALDDVVVVIETDKVSVDIRAKDKGILVEQFAAVDDNVDVGANLLKIDTSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVQRKPLIKFLGKRSLIGKDIPAAASAAQMARTGAAATGPAPGRYEDLKSTPGSKTFDEMPAMFGRPSLSEKEIEAIESGGATL 287
+RA H S++ R+M E ++ VPSMGDSI+EGT+ +K +G V +D+VV+V+ETDKVSVD+ + G LV+QF +D +V+VG +L ID XXXXXXXXXXXXXXXXXXXXXXXXXXXXX E R P IKFLGKRSL+ P +A+ + + +++ P F +P+ F R +S+KEI AI + + L
Sbjct: 16 SRALH-SSAMRLMPEHIVKVPSMGDSISEGTVVDLKKQIGQHVEVDEVVMVLETDKVSVDVMSPVAGTLVKQFVELDQDVEVGRDLFVIDGDV---------KATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHHEGARVPRIKFLGKRSLLAHPAPTSAAPSTLVVAPSSSADVLP--------------FGSLPSRFARKPISKKEIHAINTAASFL 212
BLAST of NO14G01200 vs. NCBI_GenBank
Match: EWM23638.1 (dihydrolipoamide succinyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 95.9 bits (237), Expect = 2.200e-16 Identity = 53/92 (57.61%), Postives = 63/92 (68.48%), Query Frame = 0
Query: 67 RAFHASTSSRMMAEVVMTVPSMGDSITEGTIKSWEKNVGDVVALDDVVVVIETDKVSVDIRAKDKGILVEQFAAVDDNVDVGANLLKIDTSA 159
RA AS + ++ VPSMGDSITEGTI +W+K VGD V DDV+VV+ETDKVSVD+RA GI+ E A DD V VG L KIDT+A
Sbjct: 73 RALSASAGQ----DFILNVPSMGDSITEGTIVNWQKKVGDWVDADDVIVVLETDKVSVDVRAPRSGIITEVIGAEDDTVGVGVPLAKIDTTA 160
BLAST of NO14G01200 vs. NCBI_GenBank
Match: OQR90254.1 (hypothetical protein ACHHYP_05680 [Achlya hypogyna]) HSP 1 Score: 95.9 bits (237), Expect = 2.200e-16 Identity = 99/224 (44.20%), Postives = 123/224 (54.91%), Query Frame = 0
Query: 67 RAFHASTSSRMMAEVVMTVPSMGDSITEGTIKSWEKNVGDVVALDDVVVVIETDKVSVDIRAKDKGILVEQFAAVDDNVDVGANLLKIDTSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVQRKPLIKFLGKRSLIGKDIPAAASAAQMARTGAAATGPAPGRYEDLKSTPGSKT----FDEMPAMFGRPSLSEKEIEAIESGGATL 287
R H S++ R M E ++ VPSMGDSI+EGT+ K +G+ V +D+VV+V+ETDKVSVD+ + G LV+QF +D +V+VG +L ID XXXXXXXXXXXXXXXXXXXXXX R P IKFLGKRSL+ PAA AA P P L P S F PA F R +S+KE+ AI + A L
Sbjct: 15 RCLH-SSAMRFMPEHIVKVPSMGDSISEGTVVDLRKQIGEHVNVDEVVMVLETDKVSVDVMSPVAGTLVKQFVELDQDVEVGRDLFVIDGDVKATVTSSTXXXXXXXXXXXXXXXXXXXXXXHHTG------------ARVPRIKFLGKRSLLAHPAPAATKAA-----------PTP-----LVIAPSSSADVLPFGAAPARFARKPISKKEVHAINTAAAFL 209
BLAST of NO14G01200 vs. NCBI_GenBank
Match: CBJ27482.1 (2-oxoglutarate dehydrogenase, E2 component [Ectocarpus siliculosus]) HSP 1 Score: 95.5 bits (236), Expect = 2.800e-16 Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 0
Query: 79 AEVVMTVPSMGDSITEGTIKSWEKNVGDVVALDDVVVVIETDKVSVDIRAKDKGILVEQFAAVDDNVDVGANLLKIDTS 158
+E V+ VPSMGDSI+EGTI W K GD V LD+VVVV+ETDKVS+D+RA G LVEQ AA D V+VGA L+K+DT+
Sbjct: 74 SEEVIPVPSMGDSISEGTIVEWAKQPGDSVELDEVVVVLETDKVSIDVRAPSAGTLVEQMAADGDTVEVGAPLMKLDTA 152
BLAST of NO14G01200 vs. NCBI_GenBank
Match: OEU18492.1 (single hybrid motif-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 94.0 bits (232), Expect = 8.200e-16 Identity = 110/217 (50.69%), Postives = 134/217 (61.75%), Query Frame = 0
Query: 72 STSSRMMAEVVMTVPSMGDSITEGTIKSWEKNVGDVVALDDVVVVIETDKVSVDIRAKDKGILVEQFAAVDDNVDVGANLLKIDTS--ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVQRKPLIKFLGKRSLIGKDIPAAASAAQMARTGAAATGPAPGRYEDLKSTPGSKTFDEMPAMFGRPSLSEKEIEAIESGGATL 287
S ++ ++ + M VPSMGDSITEGT+ W+ +G V DDV+ +IETDKV+VDI+A G++ +QF +DDNV+VGA+L +IDT AT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS R P I FL GKD AAA K +PA +GR +SE+EIEA+ SGGA L
Sbjct: 57 SATNIVLEKHTMKVPSMGDSITEGTLVEWQAQIGQKVEEDDVLALIETDKVTVDIKATKAGVITKQFGEIDDNVEVGADLYEIDTEGVATVEAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGARIPSINFL------GKDGWAAALTV--------------------------KPEVVVPANYGRLPMSEEEIEALMSGGANL 241
BLAST of NO14G01200 vs. NCBI_GenBank
Match: XP_009821610.1 (hypothetical protein H257_00569 [Aphanomyces astaci] >ETV89210.1 hypothetical protein H257_00569 [Aphanomyces astaci]) HSP 1 Score: 92.8 bits (229), Expect = 1.800e-15 Identity = 51/94 (54.26%), Postives = 63/94 (67.02%), Query Frame = 0
Query: 66 TRAFHASTSSRMMAEVVMTVPSMGDSITEGTIKSWEKNVGDVVALDDVVVVIETDKVSVDIRAKDKGILVEQFAAVDDNVDVGANLLKIDTSAT 160
+RA R A V + VPSMGDSI+EGT+ W KNVGD V DDVVVVIETDKVSVD+R+ G++ A VD NV+VGA L ++D A+
Sbjct: 44 SRAKFCVAQIRSFASVDIPVPSMGDSISEGTVVEWVKNVGDHVEADDVVVVIETDKVSVDVRSPHAGVITAHLADVDANVNVGAPLFQLDQGAS 137
BLAST of NO14G01200 vs. NCBI_GenBank
Match: XP_009037630.1 (hypothetical protein AURANDRAFT_71782 [Aureococcus anophagefferens] >EGB07632.1 hypothetical protein AURANDRAFT_71782 [Aureococcus anophagefferens]) HSP 1 Score: 91.3 bits (225), Expect = 5.300e-15 Identity = 48/86 (55.81%), Postives = 62/86 (72.09%), Query Frame = 0
Query: 72 STSSRMMAEVVMTVPSMGDSITEGTIKSWEKNVGDVVALDDVVVVIETDKVSVDIRAKDKGILVEQFAAVDDNVDVGANLLKIDTS 158
+ ++R + + VPSMGDSITEGT+ W VGD VA+DD+VV+IETDKVSV++RA G + E A +DD V+VGA L KIDTS
Sbjct: 421 AVAARCFSVEDVPVPSMGDSITEGTVAEWSVEVGDTVAVDDIVVMIETDKVSVEVRAPVSGAVTELLAELDDVVEVGAPLFKIDTS 506 The following BLAST results are available for this feature:
BLAST of NO14G01200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G01200 ID=NO14G01200|Name=NO14G01200|organism=Nannochloropsis oceanica|type=gene|length=1138bpback to top protein sequence of NO14G01200.1 >NO14G01200.1-protein ID=NO14G01200.1-protein|Name=NO14G01200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=287bpback to top Synonyms
Publications
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