NO14G01140, NO14G01140 (gene) Nannochloropsis oceanica

Overview
NameNO14G01140
Unique NameNO14G01140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length834
Alignment locationchr14:379244..380077 +

Link to JBrowse

Properties
Property NameValue
DescriptionAdenylyl cyclase-associated protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:379244..380077 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007010cytoskeleton organization
GO:0016043cellular component organization
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Vocabulary: INTERPRO
TermDefinition
IPR036222CAP_N_sf
IPR001837Adenylate_cyclase-assoc_CAP
IPR013992Adenylate_cyclase-assoc_CAP_N
Homology
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BLAST of NO14G01140 vs. NCBI_GenBank
Match: EWM24701.1 (adenylyl cyclase-associated protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 295.8 bits (756), Expect = 1.400e-76
Identity = 153/231 (66.23%), Postives = 177/231 (76.62%), Query Frame = 0 
Query:    1 MSVQ-DEHAYLSSLVANITTRLRVLEASGSSIGSACASNGGVTRPPPSTQLEFPKSLRAYDAYLQATLNPFLEAANALGGQATELGGVVKEAWEAQRDFLVMATAVKAPANDTQIISKLAPAQAAIKTAQKMIQRNEFENHAKAVAEGMQALTWVVVRPAPCDYIENFIGAADFWGNKVRIQHKKTAPEHVTFVDAYKKLVVELMGYVKECHLTGVGWNPQGVDIDTYTPG 231
            MS Q DEHAYLSSL+ANIT RLR+LE  G S G +   +       PS  +E    L  YD YL+ATL+PFLE+A  LGGQA EL  VVK+AW AQR+FL MA  VKAPAND  I++KL+P Q  I+ AQK+IQRN+FENHAK+VAEGMQALTWVVVRPAP +YIENFIGAADFWGNKVR+QHKKTAPEHV FVD YK+++V+L  YVK  H+TGV WNPQG DI  Y PG
Sbjct:   12 MSTQADEHAYLSSLLANITERLRILE--GGSPGKSTPESSSAPM-LPSQAIE----LATYDEYLKATLHPFLESAAKLGGQAVELSEVVKDAWGAQREFLAMACCVKAPANDADIVAKLSPVQEIIQKAQKLIQRNDFENHAKSVAEGMQALTWVVVRPAPTEYIENFIGAADFWGNKVRVQHKKTAPEHVAFVDNYKRMIVDLAAYVKAQHVTGVTWNPQGRDIKDYAPG 235
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BLAST of NO14G01140 vs. NCBI_GenBank
Match: XP_008865253.1 (hypothetical protein H310_03239 [Aphanomyces invadans] >ETW05476.1 hypothetical protein H310_03239 [Aphanomyces invadans])

HSP 1 Score: 181.8 bits (460), Expect = 2.900e-42
Identity = 97/221 (43.89%), Postives = 137/221 (61.99%), Query Frame = 0 
Query:   10 LSSLVANITTRLRVLEAS-GSSIGSACASNGGVTRPPPSTQLEFPKSLRAYDAYLQATLNPFLEAANALGGQATELGGVVKEAWEAQRDFLVMATAVKAPANDTQIISKLAPAQAAIKTAQKM-IQRNEFENHAKAVAEGMQALTWVVVRPAPCDYIENFIGAADFWGNKVRIQHKKTAPEHVTFVDAYKKLVVELMGYVKECHLTGVGWNPQGVDIDTYT 229
            L  ++  +  R+  LEA  G    +  AS+G    P     +E    + AYD Y  + L PFL AA+ LG +    GG+VK A+E QR +L+ A+  K PA  + + + LAP Q AIK+  K+ ++ NEF NH K +AEG+Q L W+ V PAP  +IE++IG ADFWGNK+R++ K T PEH+ FV  +K L+ ELM YVKE H TGV WNP+G ++D ++
Sbjct:    7 LQDMLNRLHERIAQLEAHLGFKTPARDASSGSSAAP----VVELAPRITAYDEYTASFLTPFLAAADKLGEEGKTFGGIVKSAFEGQRTYLLAASMSKKPAT-SPVPALLAPIQEAIKSVNKLRLKGNEFVNHQKMLAEGIQGLGWLCVEPAPKPFIESYIGGADFWGNKIRVEFKTTKPEHIDFVATFKTLLTELMAYVKEHHTTGVTWNPRGGNVDEFS 222
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BLAST of NO14G01140 vs. NCBI_GenBank
Match: XP_009834116.1 (hypothetical protein H257_09570 [Aphanomyces astaci] >ETV76571.1 hypothetical protein H257_09570 [Aphanomyces astaci])

HSP 1 Score: 176.8 bits (447), Expect = 9.400e-41
Identity = 92/223 (41.26%), Postives = 132/223 (59.19%), Query Frame = 0 
Query:    7 HAYLSSLVANITTRLRVLEASGSSIGSACASNGGVTRPPPSTQLEFPKSLRAYDAYLQATLNPFLEAANALGGQATELGGVVKEAWEAQRDFLVMATAVKAPANDTQIISKLAPAQAAIKTAQKM-IQRNEFENHAKAVAEGMQALTWVVVRPAPCDYIENFIGAADFWGNKVRIQHKKTAPEHVTFVDAYKKLVVELMGYVKECHLTGVGWNPQGVDIDTYT 229
            H  ++ L A++  +    +A  SS+G A A             +E    + AYD Y  + L PFL AA+ LG +    G +VK A++ QR +L+ A+  K P     + + LAP Q AIK+  K+ ++ NEF NH K + EG+Q L W+ + PAP  +IE++IG ADFWGNK+R++ K T PEHV FV  +K L+ ELM YVKE H TGV WNP+G  +D ++
Sbjct:   15 HERIAQLEAHLGFKSPSRDAGSSSVGQAAA-----------PVVELAPRITAYDEYTASYLTPFLAAADKLGEEGKAFGAIVKSAFDGQRTYLLAASVSKKPTTG-PVPALLAPIQDAIKSVNKLRVKGNEFVNHQKMLGEGIQGLGWLCIEPAPKPFIESYIGGADFWGNKIRVEFKATKPEHVDFVATFKALLTELMAYVKEHHTTGVTWNPRGGSVDDFS 225
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BLAST of NO14G01140 vs. NCBI_GenBank
Match: XP_002998727.1 (adenylyl cyclase-associated protein, putative [Phytophthora infestans T30-4] >EEY70080.1 adenylyl cyclase-associated protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 167.2 bits (422), Expect = 7.400e-38
Identity = 85/181 (46.96%), Postives = 114/181 (62.98%), Query Frame = 0 
Query:   51 EFPKSLRAYDAYLQATLNPFLEAANALGGQATELGGVVKEAWEAQRDFLVMATAVKAPANDTQIISKLAPAQAAIKTAQKM-IQRNEFENHAKAVAEGMQALTWVVVRPAPCDYIENFIGAADFWGNKVRIQHKKTAPEHVTFVDAYKKLVVELMGYVKECHLTGVGWNPQGVDIDTYTPG 231
            E    L AYD Y+   L PF++ A  LG    +LG V ++A+EAQR +L+MA+  K PA  T     L   QA IK    +   R+EF NH   V EG+QAL W+ V PAP  +IE+++G +DFWGNK+R+Q+K + P+ + FV A+K L+ ELM YVK  H TGV WNP+G D+  YTPG
Sbjct:   49 ELSPQLEAYDEYVAQYLPPFVDVAAKLGEDTKKLGEVTEKAFEAQRAYLLMASQCKKPA--TLNPEHLKDLQACIKEINSLRDNRSEFANHQNMVNEGIQALGWLCVEPAPKPFIESYVGGSDFWGNKIRVQYKTSNPDQIAFVTAFKSLLTELMVYVKAHHTTGVTWNPKGSDVANYTPG 227
[Close]
BLAST of NO14G01140 vs. NCBI_GenBank
Match: ETI54741.1 (hypothetical protein F443_02503 [Phytophthora parasitica P1569])

HSP 1 Score: 166.4 bits (420), Expect = 1.300e-37
Identity = 85/181 (46.96%), Postives = 113/181 (62.43%), Query Frame = 0 
Query:   51 EFPKSLRAYDAYLQATLNPFLEAANALGGQATELGGVVKEAWEAQRDFLVMATAVKAPANDTQIISKLAPAQAAIKTAQKM-IQRNEFENHAKAVAEGMQALTWVVVRPAPCDYIENFIGAADFWGNKVRIQHKKTAPEHVTFVDAYKKLVVELMGYVKECHLTGVGWNPQGVDIDTYTPG 231
            E    L AYD Y+   L PF+E A  LG    +LG V ++A+ AQR +L+MA+  K PA  T     L   QA IK    +   R+EF NH   V EG+QAL W+ V PAP  +IE+++G +DFWGNK+R+Q+K + P+ + FV A+K L+ ELM YVK  H TGV WNP+G D+  YTPG
Sbjct:   47 ELSPQLEAYDEYVAQYLPPFVEVAAKLGEDTKKLGEVTEKAFAAQRAYLLMASQCKKPA--TLNPEHLKDLQACIKEINTLRDNRSEFANHQNMVNEGIQALGWLCVEPAPKPFIESYVGGSDFWGNKIRVQYKTSNPDQIAFVTAFKSLLTELMAYVKAHHTTGVTWNPKGGDVANYTPG 225
[Close]
BLAST of NO14G01140 vs. NCBI_GenBank
Match: ETK94604.1 (hypothetical protein L915_02382, partial [Phytophthora parasitica] >ETL47981.1 hypothetical protein L916_02354, partial [Phytophthora parasitica] >ETM54270.1 hypothetical protein L914_02376, partial [Phytophthora parasitica])

HSP 1 Score: 166.4 bits (420), Expect = 1.300e-37
Identity = 85/181 (46.96%), Postives = 113/181 (62.43%), Query Frame = 0 
Query:   51 EFPKSLRAYDAYLQATLNPFLEAANALGGQATELGGVVKEAWEAQRDFLVMATAVKAPANDTQIISKLAPAQAAIKTAQKM-IQRNEFENHAKAVAEGMQALTWVVVRPAPCDYIENFIGAADFWGNKVRIQHKKTAPEHVTFVDAYKKLVVELMGYVKECHLTGVGWNPQGVDIDTYTPG 231
            E    L AYD Y+   L PF+E A  LG    +LG V ++A+ AQR +L+MA+  K PA  T     L   QA IK    +   R+EF NH   V EG+QAL W+ V PAP  +IE+++G +DFWGNK+R+Q+K + P+ + FV A+K L+ ELM YVK  H TGV WNP+G D+  YTPG
Sbjct:   47 ELSPQLEAYDEYVAQYLPPFVEVAAKLGEDTKKLGEVTEKAFAAQRAYLLMASQCKKPA--TLNPEHLKDLQACIKEINTLRDNRSEFANHQNMVNEGIQALGWLCVEPAPKPFIESYVGGSDFWGNKIRVQYKTSNPDQIAFVTAFKSLLTELMAYVKAHHTTGVTWNPKGGDVANYTPG 225
[Close]
BLAST of NO14G01140 vs. NCBI_GenBank
Match: ETM01097.1 (hypothetical protein L917_02275, partial [Phytophthora parasitica])

HSP 1 Score: 166.4 bits (420), Expect = 1.300e-37
Identity = 85/181 (46.96%), Postives = 113/181 (62.43%), Query Frame = 0 
Query:   51 EFPKSLRAYDAYLQATLNPFLEAANALGGQATELGGVVKEAWEAQRDFLVMATAVKAPANDTQIISKLAPAQAAIKTAQKM-IQRNEFENHAKAVAEGMQALTWVVVRPAPCDYIENFIGAADFWGNKVRIQHKKTAPEHVTFVDAYKKLVVELMGYVKECHLTGVGWNPQGVDIDTYTPG 231
            E    L AYD Y+   L PF+E A  LG    +LG V ++A+ AQR +L+MA+  K PA  T     L   QA IK    +   R+EF NH   V EG+QAL W+ V PAP  +IE+++G +DFWGNK+R+Q+K + P+ + FV A+K L+ ELM YVK  H TGV WNP+G D+  YTPG
Sbjct:   47 ELSPQLEAYDEYVAQYLPPFVEVAAKLGEDTKKLGEVTEKAFAAQRAYLLMASQCKKPA--TLNPEHLKDLQACIKEINTLRDNRSEFANHQNMVNEGIQALGWLCVEPAPKPFIESYVGGSDFWGNKIRVQYKTSNPDQIAFVTAFKSLLTELMAYVKAHHTTGVTWNPKGGDVANYTPG 225
[Close]
BLAST of NO14G01140 vs. NCBI_GenBank
Match: XP_008899736.1 (hypothetical protein PPTG_07317 [Phytophthora parasitica INRA-310] >ETN15132.1 hypothetical protein PPTG_07317 [Phytophthora parasitica INRA-310])

HSP 1 Score: 166.4 bits (420), Expect = 1.300e-37
Identity = 85/181 (46.96%), Postives = 113/181 (62.43%), Query Frame = 0 
Query:   51 EFPKSLRAYDAYLQATLNPFLEAANALGGQATELGGVVKEAWEAQRDFLVMATAVKAPANDTQIISKLAPAQAAIKTAQKM-IQRNEFENHAKAVAEGMQALTWVVVRPAPCDYIENFIGAADFWGNKVRIQHKKTAPEHVTFVDAYKKLVVELMGYVKECHLTGVGWNPQGVDIDTYTPG 231
            E    L AYD Y+   L PF+E A  LG    +LG V ++A+ AQR +L+MA+  K PA  T     L   QA IK    +   R+EF NH   V EG+QAL W+ V PAP  +IE+++G +DFWGNK+R+Q+K + P+ + FV A+K L+ ELM YVK  H TGV WNP+G D+  YTPG
Sbjct:   47 ELSPQLEAYDEYVAQYLPPFVEVAAKLGEDTKKLGEVTEKAFAAQRAYLLMASQCKKPA--TLNPEHLKDLQACIKEINTLRDNRSEFANHQNMVNEGIQALGWLCVEPAPKPFIESYVGGSDFWGNKIRVQYKTSNPDQIAFVTAFKSLLTELMAYVKAHHTTGVTWNPKGGDVANYTPG 225
[Close]
BLAST of NO14G01140 vs. NCBI_GenBank
Match: ETO83507.1 (hypothetical protein F444_02494, partial [Phytophthora parasitica P1976])

HSP 1 Score: 166.4 bits (420), Expect = 1.300e-37
Identity = 85/181 (46.96%), Postives = 113/181 (62.43%), Query Frame = 0 
Query:   51 EFPKSLRAYDAYLQATLNPFLEAANALGGQATELGGVVKEAWEAQRDFLVMATAVKAPANDTQIISKLAPAQAAIKTAQKM-IQRNEFENHAKAVAEGMQALTWVVVRPAPCDYIENFIGAADFWGNKVRIQHKKTAPEHVTFVDAYKKLVVELMGYVKECHLTGVGWNPQGVDIDTYTPG 231
            E    L AYD Y+   L PF+E A  LG    +LG V ++A+ AQR +L+MA+  K PA  T     L   QA IK    +   R+EF NH   V EG+QAL W+ V PAP  +IE+++G +DFWGNK+R+Q+K + P+ + FV A+K L+ ELM YVK  H TGV WNP+G D+  YTPG
Sbjct:   66 ELSPQLEAYDEYVAQYLPPFVEVAAKLGEDTKKLGEVTEKAFAAQRAYLLMASQCKKPA--TLNPEHLKDLQACIKEINTLRDNRSEFANHQNMVNEGIQALGWLCVEPAPKPFIESYVGGSDFWGNKIRVQYKTSNPDQIAFVTAFKSLLTELMAYVKAHHTTGVTWNPKGGDVANYTPG 244
[Close]
BLAST of NO14G01140 vs. NCBI_GenBank
Match: ETP52531.1 (hypothetical protein F442_02480, partial [Phytophthora parasitica P10297])

HSP 1 Score: 166.4 bits (420), Expect = 1.300e-37
Identity = 85/181 (46.96%), Postives = 113/181 (62.43%), Query Frame = 0 
Query:   51 EFPKSLRAYDAYLQATLNPFLEAANALGGQATELGGVVKEAWEAQRDFLVMATAVKAPANDTQIISKLAPAQAAIKTAQKM-IQRNEFENHAKAVAEGMQALTWVVVRPAPCDYIENFIGAADFWGNKVRIQHKKTAPEHVTFVDAYKKLVVELMGYVKECHLTGVGWNPQGVDIDTYTPG 231
            E    L AYD Y+   L PF+E A  LG    +LG V ++A+ AQR +L+MA+  K PA  T     L   QA IK    +   R+EF NH   V EG+QAL W+ V PAP  +IE+++G +DFWGNK+R+Q+K + P+ + FV A+K L+ ELM YVK  H TGV WNP+G D+  YTPG
Sbjct:   66 ELSPQLEAYDEYVAQYLPPFVEVAAKLGEDTKKLGEVTEKAFAAQRAYLLMASQCKKPA--TLNPEHLKDLQACIKEINTLRDNRSEFANHQNMVNEGIQALGWLCVEPAPKPFIESYVGGSDFWGNKIRVQYKTSNPDQIAFVTAFKSLLTELMAYVKAHHTTGVTWNPKGGDVANYTPG 244
The following BLAST results are available for this feature:
BLAST of NO14G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24701.11.400e-7666.23adenylyl cyclase-associated protein 1 [Nannochloro... [more]
XP_008865253.12.900e-4243.89hypothetical protein H310_03239 [Aphanomyces invad... [more]
XP_009834116.19.400e-4141.26hypothetical protein H257_09570 [Aphanomyces astac... [more]
XP_002998727.17.400e-3846.96adenylyl cyclase-associated protein, putative [Phy... [more]
ETI54741.11.300e-3746.96hypothetical protein F443_02503 [Phytophthora para... [more]
ETK94604.11.300e-3746.96hypothetical protein L915_02382, partial [Phytopht... [more]
ETM01097.11.300e-3746.96hypothetical protein L917_02275, partial [Phytopht... [more]
XP_008899736.11.300e-3746.96hypothetical protein PPTG_07317 [Phytophthora para... [more]
ETO83507.11.300e-3746.96hypothetical protein F444_02494, partial [Phytopht... [more]
ETP52531.11.300e-3746.96hypothetical protein F442_02480, partial [Phytopht... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR024ngnoR024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002310NSK002310Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01140.1NO14G01140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|625536gene_5682Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100076g5gene5789Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01140.1NO14G01140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01140 ID=NO14G01140|Name=NO14G01140|organism=Nannochloropsis oceanica|type=gene|length=834bp
ATGTCGGTCCAAGACGAGCACGCCTACCTCTCCTCCTTGGTCGCCAACAT
CACGACTCGGCTACGCGTCCTCGAAGCCAGCGGCAGCAGCATTGGCAGCG
CATGCGCCTCAAATGGAGGCGTTACGCGGCCTCCTCCCTCCACCCAACTG
GAGTTCCCCAAATCCCTCCGGGCCTACGACGCCTACCTGCAAGCGACCCT
CAACCCCTTCCTTGAGGCTGCTAACGCCCTGGGCGGACAAGCGACAGAGC
TGGGCGGTGTGGTGAAGGAAGCCTGGGAAGCCCAACGTGATTTCCTCGTC
ATGGCCACGGCCGTCAAAGCCCCTGCAAACGACACCCAAATCATTAGCAA
GCTCGCCCCCGCCCAAGCCGCCATCAAAACGGCACAGAAAATGATTCAAC
GGAATGAATTCGAAAACCATGCCAAGGCCGTGGCAGAAGGCATGCAGGCC
TTGACCTGGGTAGTGGTCCGGCCGGCTCCCTGTGACTACATAGAGAATTT
CATCGGCGCCGCTGACTTCTGGGGAAATAAAGTTCGGATCCAGCACAAGA
AGACCGCGCCTGAACATGTGACGTTTGTCGACGCCTATAAAAAGCTGGTT
GTGGAATTGATGGGCTACGTCAAGGAATGCCATCTGACAGGGGTGGGGTG
GAATCCACAAGGGGTGGATATAGACACATACACCCCCGGCTCCTCCTCTG
CTTCCTCATCCTCCTCCTCCCCCTCCTCCTCCTCAGCCTCCCCCTCCCTC
CCCCCTCTTCGTCTACAACAGCAGCAGCAGCGACGCCAGCAGCAGTGGTG
CAGCCGGCTGGAGGGGGAAGGGCGGGTCTGTTGA
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protein sequence of NO14G01140.1

>NO14G01140.1-protein ID=NO14G01140.1-protein|Name=NO14G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=278bp
MSVQDEHAYLSSLVANITTRLRVLEASGSSIGSACASNGGVTRPPPSTQL
EFPKSLRAYDAYLQATLNPFLEAANALGGQATELGGVVKEAWEAQRDFLV
MATAVKAPANDTQIISKLAPAQAAIKTAQKMIQRNEFENHAKAVAEGMQA
LTWVVVRPAPCDYIENFIGAADFWGNKVRIQHKKTAPEHVTFVDAYKKLV
VELMGYVKECHLTGVGWNPQGVDIDTYTPGSSSASSSSSSPSSSSASPSL
PPLRLQQQQQRRQQQWCSRLEGEGRVC*
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Synonyms
Publications