NO14G01060, NO14G01060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G01060 vs. NCBI_GenBank
Match: EWM24707.1 (heat shock transcription factor [Nannochloropsis gaditana]) HSP 1 Score: 313.2 bits (801), Expect = 2.300e-81 Identity = 286/686 (41.69%), Postives = 327/686 (47.67%), Query Frame = 0 Query: 70 RDYPAAGEDEDDIQSDLVPSANTFIRKLYQMVTNENNDIIAFTPDGLSFHVKDPARLESEILPKYFRHSRFQSLVRQLNFYDFKKISKERVIWIYRHKLFQHHKPHLLDELKRKPSASLVKSRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIPRQQVRG-TGGVTGAGGLSCREALTDATTAFEGHKWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCYREDAMEFSYWQAPSHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQELPEDXEMVVVMPAGEEYRSFENVPTATDYKPAPPSLPPFSSVSCVSSHGQSTQLHQQHQSMMGHQEEKTGSATFESSYSSQGRSSSRTGTHTPLPCTSFSPYPSSFTPAAFSAYVPTPEEHLAWAKIQSYWNSAGPSLQQALILSLPSQLHQAWTSFFLVIPPFQSQEGMIHACHSLLSTSPALAASVHEHRLALDPLAAASPDKTFFLQAQQQHQKEKE-------AGHNGRALREVLGFGLNHLMEAARSLSPLDVSQAAMALRECLQAWKGHTGRLL 748 R A ED++DIQSDLVPSANTFIRKL+QMVT+ENNDII+FTPDGLSFHVKDP RLE+E+LPKYFRHSRFQSLVRQLNFYDFKKISKERVIWIYRHKLFQ KPHLLD+LKRKPSASLVKSRT XXXXXXXXXXXXXXXX +P + GVTGA G++C E L+ A ++ XXXXXXXX YWQ XXXXXXXXXXXXXXXXXX Q LP++ E+VVV A + +K PPSLP +HG +S +GH K PLP Y P+ EE W IQS W++AG S QQAL+ SLPS HQAW SFFL+IPPFQ+ + +I ACH LL ++PALAASV EHR ALDPL S D TF L A ++ ++ AGHN RALREVLGFGLNHL+E+AR L + S AA+ALRECLQAWK H GR L Sbjct: 45 RSNSTASEDDEDIQSDLVPSANTFIRKLFQMVTSENNDIISFTPDGLSFHVKDPVRLENEVLPKYFRHSRFQSLVRQLNFYDFKKISKERVIWIYRHKLFQQGKPHLLDDLKRKPSASLVKSRT---------------------------------------------------------ESSSRRGSGSMGRHGAGNSHSVGRPMSASGSRRGSRSVSPLCSFESGTTTPSSSDSSPSISPSRGALKRTRRQEASLXXXXXXXXXXXXXXXXPVPYDDAKHLVAGVTGA-GMTCLETLSQAASS--------VGQNAPKAARLEREAAASYGXXXXXXXXXXXXXXXXXXYWQ-----PXXXXXXXXXXXXXXXXXXACWVMKTMMMRGREGGAESGFEEGMQALPDEEEIVVVTKASFA-PTLAKKEGPQGHKAHPPSLP--------FAHGPRETSPGPEKSSLGHLGVK------------------------PLPPPXXXXXXXXXXXXXXXXYHPSREELRTWGYIQSQWSAAGQSQQQALLASLPSHCHQAWASFFLIIPPFQTHQRLIRACHRLLCSNPALAASVTEHRHALDPL-GRSADSTFLLPADAGEEEVEKLSIGTVAAGHNDRALREVLGFGLNHLVESARFLHTTEGSPAALALRECLQAWKCHMGRWL 625
BLAST of NO14G01060 vs. NCBI_GenBank
Match: CBJ30543.1 (Heat Shock transcription factor [Ectocarpus siliculosus]) HSP 1 Score: 135.2 bits (339), Expect = 8.400e-28 Identity = 64/106 (60.38%), Postives = 77/106 (72.64%), Query Frame = 0 Query: 89 SANTFIRKLYQMVTNENNDIIAFTPDGLSFHVKDPARLESEILPKYFRHSRFQSLVRQLNFYDFKKISKERVIWIYRHKLFQHHKPHLLDELKRKPSASLVKSRTG 195 S +F+RKL+QMV E + I+ F DG +F VKDP RLE +ILPKYFRHSRFQSLVRQLNFY FKKISKER +WIY+H F+ +P LL LKRK + +R G Sbjct: 364 SVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAPARVG 469
BLAST of NO14G01060 vs. NCBI_GenBank
Match: EWM25958.1 (Winged helix-turn-helix transcription repressor [Nannochloropsis gaditana]) HSP 1 Score: 130.2 bits (326), Expect = 2.700e-26 Identity = 61/93 (65.59%), Postives = 74/93 (79.57%), Query Frame = 0 Query: 93 FIRKLYQMVTNENNDIIAFTPDGLSFHVKDPARLESEILPKYFRHSRFQSLVRQLNFYDFKKISKERVIWIYRHKLFQHHKPHLLDELKRKPS 186 F++KL+ MV E+ I++FTPDG SF VK+P RLESEILP+Y+RH F S VRQLNFY+FKK+SKER IWIYRH+ FQ +P LLD LKRK S Sbjct: 27 FVKKLFTMVAVEDPSILSFTPDGKSFEVKNPKRLESEILPRYYRHGHFTSFVRQLNFYNFKKVSKERNIWIYRHECFQRGRPQLLDMLKRKTS 119
BLAST of NO14G01060 vs. NCBI_GenBank
Match: XP_002288677.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94113.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 108.2 bits (269), Expect = 1.100e-19 Identity = 47/91 (51.65%), Postives = 65/91 (71.43%), Query Frame = 0 Query: 93 FIRKLYQMVTNENNDIIAFTPDGLSFHVKDPARLESEILPKYFRHSRFQSLVRQLNFYDFKKISKERVIWIYRHKLFQHHKPHLLDELKRK 184 F+ KL+QMV +DI+++ P G +F + D +RLE E LP YFRHSRFQSLVRQLNFY+F+K+++ER W+Y H LF + L L+R+ Sbjct: 25 FVMKLFQMVNGAEDDIVSWVPSGQAFRINDISRLEKETLPSYFRHSRFQSLVRQLNFYNFRKVNRERTFWVYYHPLFHRDQEENLHNLRRR 115
BLAST of NO14G01060 vs. NCBI_GenBank
Match: OEU15390.1 (hypothetical protein FRACYDRAFT_240076 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 106.3 bits (264), Expect = 4.200e-19 Identity = 54/98 (55.10%), Postives = 71/98 (72.45%), Query Frame = 0 Query: 87 VPSANTFIRKLYQMVTNENNDIIAFTPDGLSFHV-KDPARLESEILPKYFRHSRFQSLVRQLNFYDFKKISKERVIWIYRHKLFQHHKPHLLDELKRK 184 VPS FI KLYQMV +++I +TP G +F + D RLESE LP+YFRH+RFQSLVRQLNFY F+KI++ER +WIY+H LF P L +++R+ Sbjct: 32 VPSG--FILKLYQMVNGAPDEVITWTPSGDAFIIGSDLNRLESETLPQYFRHNRFQSLVRQLNFYSFRKINRERNVWIYKHNLFHRDHPEELYQVRRR 127
BLAST of NO14G01060 vs. NCBI_GenBank
Match: XP_002181431.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47354.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 104.4 bits (259), Expect = 1.600e-18 Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = 0 Query: 93 FIRKLYQMVTNENNDIIAFTPDGLSFHV-KDPARLESEILPKYFRHSRFQSLVRQLNFYDFKKISKERVIWIYRHKLFQHHKPHLLDELKRK 184 FI KL+QMV + +I++TP+G +F + D RLESE LP+YFRH+RFQSLVRQLNFY F+KI++ER +WIY+H LF +P L+ ++R+ Sbjct: 30 FILKLFQMVNGAPDKVISWTPNGDAFIIGSDLNRLESETLPQYFRHNRFQSLVRQLNFYSFRKINRERNVWIYKHSLFHRDRPEDLNMVRRR 121
BLAST of NO14G01060 vs. NCBI_GenBank
Match: XP_008617522.1 (hypothetical protein SDRG_13218 [Saprolegnia diclina VS20] >EQC29063.1 hypothetical protein SDRG_13218 [Saprolegnia diclina VS20]) HSP 1 Score: 97.1 bits (240), Expect = 2.500e-16 Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = 0 Query: 89 SANTFIRKLYQMVTNENNDIIAFTPDGLSFHVKDPARLESEILPKYFRHSRFQSLVRQLNFYDFKKISKERVI-----------WIYRHKLFQHHKPHLLDELKRKPSAS 188 +A F++K + MV+ +I A+ PDG +F VKDP S +LPKYF+HS F S VRQLNFY F+K KE ++ W + H+ F HKPHL+ ++KRK + S Sbjct: 6 TAAIFLKKTFDMVSQSPTEIAAWAPDGATFVVKDPKEFASLMLPKYFKHSNFSSFVRQLNFYGFRKSKKEVLLVALESSDIKNSWEFYHENFHQHKPHLMAKIKRKTNNS 115
BLAST of NO14G01060 vs. NCBI_GenBank
Match: OQR88166.1 (HSF-type DNA-binding [Achlya hypogyna]) HSP 1 Score: 95.1 bits (235), Expect = 9.600e-16 Identity = 48/110 (43.64%), Postives = 66/110 (60.00%), Query Frame = 0 Query: 89 SANTFIRKLYQMVTNENNDIIAFTPDGLSFHVKDPARLESEILPKYFRHSRFQSLVRQLNFYDFKKISKERVI-----------WIYRHKLFQHHKPHLLDELKRKPSAS 188 +A F++K Y MV+ DI A+ PDG +F VKDP + +LPKYF+H F S VRQLNFY F+K KE ++ W + H+ F HKPHL+ ++KRK + S Sbjct: 6 TAAIFLKKTYDMVSQSPADIAAWGPDGSTFVVKDPKEFAALMLPKYFKHCNFSSFVRQLNFYGFRKSKKEVLLVALETSDIKNSWEFYHEHFHQHKPHLMAKIKRKTNNS 115
BLAST of NO14G01060 vs. NCBI_GenBank
Match: XP_009839246.1 (hypothetical protein H257_13437 [Aphanomyces astaci] >ETV71306.1 hypothetical protein H257_13437 [Aphanomyces astaci]) HSP 1 Score: 93.6 bits (231), Expect = 2.800e-15 Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = 0 Query: 87 VPSANTFIRKLYQMVTNENNDIIAFTPDGLSFHVKDPARLESEILPKYFRHSRFQSLVRQLNFYDFKKISKERVI-----------WIYRHKLFQHHKPHLLDELKRK 184 V SA F++K Y M+ + + ++ DG SF V++P + +LPKYF+HS F S VRQLNFY F+K KE ++ W + H+LF HKPHL+ ++KRK Sbjct: 7 VSSAAIFLKKTYDMIDTAPSSVAGWSDDGGSFIVREPKEFAAYMLPKYFKHSNFSSFVRQLNFYGFRKTKKEVLLVALETDDLKNSWEFHHELFHQHKPHLMAKIKRK 114
BLAST of NO14G01060 vs. NCBI_GenBank
Match: XP_008864259.1 (hypothetical protein H310_02503 [Aphanomyces invadans] >ETW08166.1 hypothetical protein H310_02503 [Aphanomyces invadans]) HSP 1 Score: 91.7 bits (226), Expect = 1.100e-14 Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = 0 Query: 87 VPSANTFIRKLYQMVTNENNDIIAFTPDGLSFHVKDPARLESEILPKYFRHSRFQSLVRQLNFYDFKKISKERVI-----------WIYRHKLFQHHKPHLLDELKRKPSAS 188 V SA F++K Y M+ +I ++ +G SF V++P + +LPKYF+H+ F S VRQLNFY F+K KE ++ W + H+LF HKPHL+ ++KRK + S Sbjct: 7 VSSAAIFLKKTYDMINTAPANIAGWSDNGGSFVVREPKEFAAVMLPKYFKHNNFSSFVRQLNFYGFRKTKKEVLLVALETDDLKNSWEFHHELFHQHKPHLMAKIKRKTNYS 118 The following BLAST results are available for this feature:
BLAST of NO14G01060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G01060 ID=NO14G01060|Name=NO14G01060|organism=Nannochloropsis oceanica|type=gene|length=4117bpback to top protein sequence of NO14G01060.1 >NO14G01060.1-protein ID=NO14G01060.1-protein|Name=NO14G01060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=748bpback to top Synonyms
Publications
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