NO14G01020, NO14G01020 (gene) Nannochloropsis oceanica

Overview
NameNO14G01020
Unique NameNO14G01020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length849
Alignment locationchr14:338980..339828 +

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Properties
Property NameValue
DescriptionVasohibin-1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:338980..339828 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0045765regulation of angiogenesis
GO:0045765regulation of angiogenesis
Vocabulary: INTERPRO
TermDefinition
IPR028131Vasohibin
Homology
BLAST of NO14G01020 vs. NCBI_GenBank
Match: XP_009834726.1 (hypothetical protein H257_10009 [Aphanomyces astaci] >ETV75595.1 hypothetical protein H257_10009 [Aphanomyces astaci])

HSP 1 Score: 89.0 bits (219), Expect = 2.600e-14
Identity = 68/186 (36.56%), Postives = 93/186 (50.00%), Query Frame = 0
Query:    4 RALDEIQAHVSKAQSSMTRLTYEAHHPSLDKQRVGAQGMHK-IDQVGRNILRKDKPIQCLEAVMVAAHLTTRLP----------VHRLPLSFTTRVLQTGQTHKHIVLALTSESHQR-WGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNIDL 178
            +A   ++  ++  Q+ M  L Y  ++       V     HK I    ++I+    PIQCLEAV +AA+LT   P          + R+P+SF T     G T +HIVLA+    HQ  WGA+G+SRS  LM+K L F S S LV  +   Y+   H +  V VG PFS     T  V W+ LNI L
Sbjct:   36 KASSNVRTKMAAIQTYMNALEY--NYTGKMYFDVSKNRSHKSIYGTAKDIIHDALPIQCLEAVFLAAYLTAGGPEYEGATFNHQIDRIPISFKTS--SGGTTFRHIVLAI---KHQHLWGALGLSRSPGLMNKELKFKSLSDLVGNFVEQYTAVCHDVIKVYVGFPFSHDIHSTERVEWRVLNIKL 214          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: XP_009834728.1 (hypothetical protein, variant 1 [Aphanomyces astaci] >ETV75596.1 hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 89.0 bits (219), Expect = 2.600e-14
Identity = 59/139 (42.45%), Postives = 76/139 (54.68%), Query Frame = 0
Query:   50 RNILRKDKPIQCLEAVMVAAHLTTRLP----------VHRLPLSFTTRVLQTGQTHKHIVLALTSESHQR-WGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNIDL 178
            ++I+    PIQCLEAV +AA+LT   P          + R+P+SF T     G T +HIVLA+    HQ  WGA+G+SRS  LM+K L F S S LV  +   Y+   H +  V VG PFS     T  V W+ LNI L
Sbjct:   37 KDIIHDALPIQCLEAVFLAAYLTAGGPEYEGATFNHQIDRIPISFKTS--SGGTTFRHIVLAI---KHQHLWGALGLSRSPGLMNKELKFKSLSDLVGNFVEQYTAVCHDVIKVYVGFPFSHDIHSTERVEWRVLNIKL 170          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: XP_009834727.1 (hypothetical protein, variant 2 [Aphanomyces astaci] >ETV75597.1 hypothetical protein, variant 2 [Aphanomyces astaci])

HSP 1 Score: 89.0 bits (219), Expect = 2.600e-14
Identity = 68/186 (36.56%), Postives = 93/186 (50.00%), Query Frame = 0
Query:    4 RALDEIQAHVSKAQSSMTRLTYEAHHPSLDKQRVGAQGMHK-IDQVGRNILRKDKPIQCLEAVMVAAHLTTRLP----------VHRLPLSFTTRVLQTGQTHKHIVLALTSESHQR-WGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNIDL 178
            +A   ++  ++  Q+ M  L Y  ++       V     HK I    ++I+    PIQCLEAV +AA+LT   P          + R+P+SF T     G T +HIVLA+    HQ  WGA+G+SRS  LM+K L F S S LV  +   Y+   H +  V VG PFS     T  V W+ LNI L
Sbjct:   36 KASSNVRTKMAAIQTYMNALEY--NYTGKMYFDVSKNRSHKSIYGTAKDIIHDALPIQCLEAVFLAAYLTAGGPEYEGATFNHQIDRIPISFKTS--SGGTTFRHIVLAI---KHQHLWGALGLSRSPGLMNKELKFKSLSDLVGNFVEQYTAVCHDVIKVYVGFPFSHDIHSTERVEWRVLNIKL 214          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: XP_004991332.1 (hypothetical protein PTSG_07536 [Salpingoeca rosetta] >EGD76417.1 hypothetical protein PTSG_07536 [Salpingoeca rosetta])

HSP 1 Score: 88.6 bits (218), Expect = 3.400e-14
Identity = 53/141 (37.59%), Postives = 82/141 (58.16%), Query Frame = 0
Query:   44 KIDQVGRNILRKDKPIQCLEAVMVAAHLTTRLP-VHRLPLSFTTRVLQTGQTHKHIVLALTSESHQRWGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNIDLKAQGED 184
            ++ ++GR I R   PI+CLEAV+VA +L      +HR+P+SF +R    G T++HIVL +    + ++GA+G+SR   LM K   + S +AL+ EY++ Y   GH L  V VG P       T  + W+ L + +K  GE+
Sbjct:  181 RLMELGRLICRTCLPIKCLEAVIVALYLLLPFENLHRIPISFKSRF--CGHTYQHIVLGV--HVNGKFGALGLSRRQHLMYKPCRYNSLAALIREYEQRYEEVGHTLVRVRVGRPIPPSRHSTQAIPWRHLILVMKRLGEE 317          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: XP_008864780.1 (hypothetical protein H310_02885 [Aphanomyces invadans] >ETW06705.1 hypothetical protein H310_02885 [Aphanomyces invadans])

HSP 1 Score: 88.2 bits (217), Expect = 4.500e-14
Identity = 57/136 (41.91%), Postives = 75/136 (55.15%), Query Frame = 0
Query:   50 RNILRKDKPIQCLEAVMVAAHLTTRLP----------VHRLPLSFTTRVLQTGQTHKHIVLALTSESHQRWGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNI 176
            ++I+    PIQCLEAV VAA+LT   P          + R+P+SF T  L  G   +HIVLA+  +    WGA+G+SRS  LM+K L F S S LV  Y  +Y+   H +  + VG PFS     T  V W+ LNI
Sbjct:   81 KDIIHDALPIQCLEAVFVAAYLTAGGPEYEGATFNHQIDRIPISFKT--LSGGTIFRHIVLAI--KYQHLWGALGLSRSPGLMNKDLKFKSLSELVCNYIENYNAVRHDVVKIYVGFPFSHDIHSTERVEWRVLNI 212          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: XP_008864781.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW06706.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 88.2 bits (217), Expect = 4.500e-14
Identity = 57/136 (41.91%), Postives = 75/136 (55.15%), Query Frame = 0
Query:   50 RNILRKDKPIQCLEAVMVAAHLTTRLP----------VHRLPLSFTTRVLQTGQTHKHIVLALTSESHQRWGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNI 176
            ++I+    PIQCLEAV VAA+LT   P          + R+P+SF T  L  G   +HIVLA+  +    WGA+G+SRS  LM+K L F S S LV  Y  +Y+   H +  + VG PFS     T  V W+ LNI
Sbjct:   81 KDIIHDALPIQCLEAVFVAAYLTAGGPEYEGATFNHQIDRIPISFKT--LSGGTIFRHIVLAI--KYQHLWGALGLSRSPGLMNKDLKFKSLSELVCNYIENYNAVRHDVVKIYVGFPFSHDIHSTERVEWRVLNI 212          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: XP_012196307.1 (hypothetical protein SPRG_02341 [Saprolegnia parasitica CBS 223.65] >KDO32640.1 hypothetical protein SPRG_02341 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 87.8 bits (216), Expect = 5.800e-14
Identity = 53/140 (37.86%), Postives = 78/140 (55.71%), Query Frame = 0
Query:   50 RNILRKDKPIQCLEAVMVAAHLTTR-LP----------VHRLPLSFTTRVLQTGQTHKHIVLALTSESHQR-WGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNIDL 178
            + I+ +  PIQCLEAV VAA+LT   +P          + R+P+SF  +    G   +HIVL +    HQ  WGA+G+SR+  LM+K L +  FS L+ +Y  ++S C H +  + VG PFS     +  V W+ LNI +
Sbjct:   76 KEIMAEALPIQCLEAVFVAAYLTAHGMPEYEGMNPSHQIERVPISF--KSTSGGSVFRHIVLGV---KHQHLWGALGLSRNPSLMNKDLKYKHFSELLADYVENFSKCHHTVTKIYVGFPFSHDIHSSEKVQWRVLNIKI 210          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: GBG30784.1 (Vasohibin-2 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 87.8 bits (216), Expect = 5.800e-14
Identity = 58/173 (33.53%), Postives = 96/173 (55.49%), Query Frame = 0
Query:    6 LDEIQAHVSKAQSSMTRLTYEAHHPSLDKQRVGAQGMHKIDQVGRNILRKDKPIQCLEAVMVAAHLTTRL-PVHRLPLSFTTRVLQTGQ-THKHIVLALTSESHQRWGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNID 177
            L+ IQ ++S+ + + T   Y     ++ K R    G  ++    R I+R+  PI+C+EAV +  +LT  +  + R+PL F + V Q GQ   KHIV+A+  +   RWGA+G+SR   LM + + F S + L++++  +Y   GH ++ V VGLPF        P+ W+ L I+
Sbjct:  105 LERIQQYISRLEYNHTGTNYF----TIRKDR----GAKRLAGTAREIMRECLPIKCIEAVFLGFYLTLGMNDLVRIPLRFQSSVEQNGQFVFKHIVMAVGHKG--RWGAIGLSRKETLMHRKIQFDSLAELIKDFCGAYGDLGHSVQHVGVGLPFGHCEHSMEPIHWRPLMIE 267          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: GAX80038.1 (hypothetical protein CEUSTIGMA_g7477.t1 [Chlamydomonas eustigma])

HSP 1 Score: 87.4 bits (215), Expect = 7.600e-14
Identity = 56/167 (33.53%), Postives = 83/167 (49.70%), Query Frame = 0
Query:   44 KIDQVGRNILRKDKPIQCLEAVMVAAHLTTRLP-VHRLPLSFTTRVLQTGQTHKHIVLALTSESHQRWGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNIDLKAQGEDKRNTPSSVPSTWKAVLDHYGQSVQAL 210
            +I    R +LR+  PI+C+EAV + A LT       R+PL   + V   G+T++HIVL +     Q+WGA+G+SR  ELM K L F S S LV +++  Y    H L    +GLPF         V W+  ++        KRN      +    +LD +G+  + L
Sbjct:   92 RIMDTAREVLREAMPIKCIEAVFLGALLTAGWEGTARMPLGLKSGV--NGETYRHIVLVIHHAPSQKWGALGISRREELMFKDLAFDSLSELVADFKAGYEKWWHKLHKARIGLPFEHDVFSNSSVCWRYCSV-----SPAKRNW-----AVCAGILDKFGEDYKLL 246          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: CBN74564.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 86.7 bits (213), Expect = 1.300e-13
Identity = 50/135 (37.04%), Postives = 78/135 (57.78%), Query Frame = 0
Query:   40 QGMHKIDQVGRNILRKDKPIQCLEAVMVAAHLTTRL-PVHRLPLSFTTRVLQTGQTHKHIVLALTSESHQRWGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQAL 174
            +G   +    + I+R+  PIQC+EAV V A+LT  +  V R P+ F + +   G+ ++HIVLA+ S    +WG++G+SR  +LM K L +  FS LV +++ SY+   H LE V VG P     S  + + W+ L
Sbjct:   31 RGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEVDRFPVCFRSSL--DGRVYRHIVLAVRSGG--KWGSLGLSRRDKLMYKELKYDLFSKLVGDFRESYASSWHRLEQVWVGFPLPHDISSNVAIKWKVL 161          
The following BLAST results are available for this feature:
BLAST of NO14G01020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009834726.12.600e-1436.56hypothetical protein H257_10009 [Aphanomyces astac... [more]
XP_009834728.12.600e-1442.45hypothetical protein, variant 1 [Aphanomyces astac... [more]
XP_009834727.12.600e-1436.56hypothetical protein, variant 2 [Aphanomyces astac... [more]
XP_004991332.13.400e-1437.59hypothetical protein PTSG_07536 [Salpingoeca roset... [more]
XP_008864780.14.500e-1441.91hypothetical protein H310_02885 [Aphanomyces invad... [more]
XP_008864781.14.500e-1441.91hypothetical protein, variant [Aphanomyces invadan... [more]
XP_012196307.15.800e-1437.86hypothetical protein SPRG_02341 [Saprolegnia paras... [more]
GBG30784.15.800e-1433.53Vasohibin-2 [Aurantiochytrium sp. FCC1311][more]
GAX80038.17.600e-1433.53hypothetical protein CEUSTIGMA_g7477.t1 [Chlamydom... [more]
CBN74564.11.300e-1337.04conserved unknown protein [Ectocarpus siliculosus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR024ngnoR024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01020.1NO14G01020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589927gene_5667Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01020.1NO14G01020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01020 ID=NO14G01020|Name=NO14G01020|organism=Nannochloropsis oceanica|type=gene|length=849bp
ATGCCATTGCGTGCACTAGATGAGATTCAAGCCCACGTCTCGAAGGCGCA
GTCCAGCATGACCCGTTTGACTTACGAGGCCCACCATCCGTCCCTCGACA
AGCAGCGAGTCGGGGCACAAGGCATGCACAAGATAGACCAGGTGGGACGC
AATATATTAAGAAAGGACAAGCCGATACAATGCCTTGAAGCTGTTATGGT
GGCGGCGCACCTTACGACCAGATTACCCGTTCACCGACTGCCTCTAAGTT
TCACGACGCGTGTGCTTCAGACGGGCCAGACACACAAGCACATTGTCCTT
GCGCTGACCTCCGAGAGCCATCAGCGATGGGGAGCTATGGGAATGAGCCG
ATCTTCAGAGCTCATGGACAAAGCTTTGATATTCGCGTCCTTCTCGGCAC
TGGTGGAGGAATACCAACGTTCCTATTCTATGTGCGGGCACATCCTCGAA
TCGGTTCTCGTGGGGCTGCCATTCTCTTCGAAGGCATCCTGCACACTACC
TGTTGTCTGGCAGGCCCTCAACATCGACTTGAAAGCACAGGGCGAAGACA
AGAGAAACACACCGTCTTCCGTTCCCTCTACTTGGAAAGCAGTGCTCGAT
CATTACGGGCAAAGCGTGCAGGCCTTGCTTGCGTTTCACCAACGGCACCC
AGACAGCAACCTGCCAAGTAGCCGTCTTTATGCGTGGCTTCAAGGCAAGA
AGGCACGGTTATGTTTCAAAGACTTGCTTATAATAAAAAACGGGGGGAAA
GGAGACCGGGGGGATGGTTGTGGTCGAATCAGCACGGGGAGAGGGAAGGG
CGGGAAGAGGAAGAGAGCGTGGCATGTGCCTTCCCCCTCGGGTGCATGA
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protein sequence of NO14G01020.1

>NO14G01020.1-protein ID=NO14G01020.1-protein|Name=NO14G01020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=283bp
MPLRALDEIQAHVSKAQSSMTRLTYEAHHPSLDKQRVGAQGMHKIDQVGR
NILRKDKPIQCLEAVMVAAHLTTRLPVHRLPLSFTTRVLQTGQTHKHIVL
ALTSESHQRWGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILE
SVLVGLPFSSKASCTLPVVWQALNIDLKAQGEDKRNTPSSVPSTWKAVLD
HYGQSVQALLAFHQRHPDSNLPSSRLYAWLQGKKARLCFKDLLIIKNGGK
GDRGDGCGRISTGRGKGGKRKRAWHVPSPSGA*
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Synonyms
Publications