NO14G01020, NO14G01020 (gene) Nannochloropsis oceanica

Overview
NameNO14G01020
Unique NameNO14G01020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length849
Alignment locationchr14:338980..339828 +

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Properties
Property NameValue
DescriptionVasohibin-1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:338980..339828 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0045765regulation of angiogenesis
GO:0045765regulation of angiogenesis
Vocabulary: INTERPRO
TermDefinition
IPR028131Vasohibin
Homology
BLAST of NO14G01020 vs. NCBI_GenBank
Match: KXZ49816.1 (hypothetical protein GPECTOR_19g267 [Gonium pectorale])

HSP 1 Score: 98.2 bits (243), Expect = 4.300e-17
Identity = 63/169 (37.28%), Postives = 88/169 (52.07%), Query Frame = 0
Query:   10 QAHVSKAQSSMTRLTYEAHHPSLDKQRVGAQGMHKIDQVGRNILRKDKPIQCLEAVMVAAHLTTRL-PVHRLPLSFTTRVLQTGQTHKHIVLALTSESHQRWGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNIDL 178
            Q  ++  Q  +  L Y  H P        A+   +I +  R  LR   PI+CLEAV + A LT     + RLPL+F + V   GQT++HIVL +     ++WGA+G+SR  ELMDK L++ S + LV EY+ +Y    H L  V  GLP         PV W+ L + L
Sbjct:   71 QQRLTAVQQVINSLQYN-HTPGYYYNVSKARPFSRIMETARETLRSALPIKCLEAVFLGALLTAGWHDLDRLPLAFKSTV--QGQTYRHIVLVVYHAPSRKWGALGLSRRPELMDKDLVYDSLADLVSEYKAAYERWWHALIRVYAGLPLEHDTFYQGPVCWRFLTLSL 236          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: XP_024375054.1 (uncharacterized protein LOC112282088 isoform X3 [Physcomitrella patens] >PNR54110.1 hypothetical protein PHYPA_007786 [Physcomitrella patens])

HSP 1 Score: 95.9 bits (237), Expect = 2.100e-16
Identity = 55/138 (39.86%), Postives = 82/138 (59.42%), Query Frame = 0
Query:   42 MHKIDQVGRNILRKDKPIQCLEAVMVAAHLTTRL-PVHRLPLSFTTRVLQTGQTHKHIVLALTSESHQRWGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNIDLK 179
            + +I    R I+   +PI+C+EAV VA +LT  L  V R+PL F T +   GQ ++HIVL +      +WGA G+SR S+LM+K L+F S S+++E +  +Y   GHI+  V VGLP          V W+ LN++L+
Sbjct:   43 LSRIMDTARTIIHAPQPIKCVEAVFVAVYLTAGLVDVERVPLGFKTEL--HGQVYQHIVLLV--HHGGKWGAFGISRCSDLMNKDLVFNSMSSVIENFTAAYKSQGHIVLKVRVGLPIEHNVVSPNFVCWRHLNLNLR 176          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: XP_024375049.1 (uncharacterized protein LOC112282088 isoform X1 [Physcomitrella patens] >XP_024375050.1 uncharacterized protein LOC112282088 isoform X1 [Physcomitrella patens] >XP_024375051.1 uncharacterized protein LOC112282088 isoform X1 [Physcomitrella patens] >XP_024375052.1 uncharacterized protein LOC112282088 isoform X1 [Physcomitrella patens])

HSP 1 Score: 95.9 bits (237), Expect = 2.100e-16
Identity = 55/138 (39.86%), Postives = 82/138 (59.42%), Query Frame = 0
Query:   42 MHKIDQVGRNILRKDKPIQCLEAVMVAAHLTTRL-PVHRLPLSFTTRVLQTGQTHKHIVLALTSESHQRWGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNIDLK 179
            + +I    R I+   +PI+C+EAV VA +LT  L  V R+PL F T +   GQ ++HIVL +      +WGA G+SR S+LM+K L+F S S+++E +  +Y   GHI+  V VGLP          V W+ LN++L+
Sbjct:   96 LSRIMDTARTIIHAPQPIKCVEAVFVAVYLTAGLVDVERVPLGFKTEL--HGQVYQHIVLLV--HHGGKWGAFGISRCSDLMNKDLVFNSMSSVIENFTAAYKSQGHIVLKVRVGLPIEHNVVSPNFVCWRHLNLNLR 229          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: KOO27113.1 (vasohibin-1 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 93.6 bits (231), Expect = 1.100e-15
Identity = 61/166 (36.75%), Postives = 90/166 (54.22%), Query Frame = 0
Query:    9 IQAHVSKAQSSMTRLTY---EAHHPSLDKQRVGAQGMHKIDQVGRNILRKDKPIQCLEAVMVAAHLTTRL-PVHRLPLSFTTRVLQTGQTHKHIVLALTSESHQRWGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVW 171
            +QA++ K   + T + Y     H P           M +I + GR + R+  PI+C+EAV VAA+LT  L  + R+P SF +++   G T+KHIVLA+   S  +WG++G+SR  EL  K L++ S + L  EY+RSY    H L  V VGLP   +      + W
Sbjct:   60 VQAYIEKLSYNFTGVNYFDVRKHRP-----------MSRILETGREVTRQALPIKCVEAVFVAAYLTQGLRELERVPFSFRSQI--DGVTYKHIVLAVKHSS--KWGSVGLSRRRELYYKDLVYDSLAELFLEYKRSYERVFHTLRRVKVGLPLPHEVHAGEIICW 210          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: GAQ90315.1 (hypothetical protein KFL_006260010 [Klebsormidium nitens])

HSP 1 Score: 92.4 bits (228), Expect = 2.400e-15
Identity = 64/181 (35.36%), Postives = 101/181 (55.80%), Query Frame = 0
Query:    1 MPLR-ALDEIQAHVSKAQSSMTRLTYEAHHPSLDKQRVGAQGMHKIDQVGRNILRKDKPIQCLEAVMVAAHLTTRLPVHRLPLSFTTRVLQTGQTHKHIVLALTSESHQRWGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNIDLKAQ 181
            +PLR  L  IQ  +S  + + T  TY     ++ K+R     + +I   GR I+R   PI+C+EAV +A  LT+ L + R+PL F T V   GQ  +HIVL + +    R+GA+G+SR  ELM K L+F S +A+V ++++SY    H +  + VGLP    A     + W+ L + + ++
Sbjct:   33 LPLRQRLRAIQQFISSFEYNYTPETYF----NVRKKR----PLKRIVDTGRQIIRDALPIKCVEAVFLALLLTSGLDIDRIPLGFKTAV--DGQEFRHIVLVVRNGG--RYGALGISRRKELMFKDLVFNSLAAIVTDFKQSYERWWHTVLKIRVGLPVEHDAHSQNQICWRYLLLKVSSR 201          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: XP_783118.3 (PREDICTED: vasohibin-1-like isoform X3 [Strongylocentrotus purpuratus] >XP_011674046.1 PREDICTED: vasohibin-1-like isoform X1 [Strongylocentrotus purpuratus] >XP_011674047.1 PREDICTED: vasohibin-1-like isoform X2 [Strongylocentrotus purpuratus])

HSP 1 Score: 90.1 bits (222), Expect = 1.200e-14
Identity = 49/129 (37.98%), Postives = 78/129 (60.47%), Query Frame = 0
Query:   50 RNILRKDKPIQCLEAVMVAAHLTTRLP-VHRLPLSFTTRVLQTGQTHKHIVLALTSESHQRWGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNIDL 178
            + ++R+  PI+CLEAV++  +LT   P + R P+SF T+    G  H+H+VL L   S  R+GA+GMSR  +LMDK L F S S L+  YQ +Y    H+++ + VGLP +        + W+ L++++
Sbjct:  130 KEMIRESLPIKCLEAVILGIYLTNGTPGLERFPISFKTQF--HGNIHRHVVLGLVHNS--RYGALGMSRRDDLMDKPLEFKSLSELIFSYQDAYKKYWHVVKKLKVGLPIAHDPHSFEQIHWRHLSLNM 254          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: OQS06287.1 (hypothetical protein THRCLA_01664 [Thraustotheca clavata])

HSP 1 Score: 89.7 bits (221), Expect = 1.500e-14
Identity = 53/140 (37.86%), Postives = 79/140 (56.43%), Query Frame = 0
Query:   50 RNILRKDKPIQCLEAVMVAAHLTT-----------RLPVHRLPLSFTTRVLQTGQTHKHIVLALTSESHQR-WGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNIDL 178
            + I+ +  PIQCLEAV VAA+LT               V R+P+SF +R    G   +HIVL +    HQ  WGA+G+SR+++LM+K L + +FS L+ +Y   ++ C H +  + VG PFS     +  V W+ LNI +
Sbjct:   78 KEIIHESLPIQCLEAVFVAAYLTANGNTEYEGMNPNQQVDRVPISFKSR--SGGTVFRHIVLGI---KHQHMWGALGLSRNADLMNKELKYKNFSELLADYIEHFAKCCHEVTKIYVGFPFSHDIHSSEKVQWRVLNIKI 212          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: OQR96406.1 (hypothetical protein ACHHYP_15836 [Achlya hypogyna])

HSP 1 Score: 89.4 bits (220), Expect = 2.000e-14
Identity = 67/184 (36.41%), Postives = 96/184 (52.17%), Query Frame = 0
Query:    6 LDEIQAHVSKAQSSMTRLTYEAHHPSLDKQRVGAQGMHKIDQVGRNILRKDKPIQCLEAVMVAAHLTTR-LP----------VHRLPLSFTTRVLQTGQTHKHIVLALTSESHQR-WGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNIDL 178
            L  IQA++S  + + T   Y     +++K R        I    + I+ +  PIQCLEAV VAA+LT   +P          + R+P+SF +R      T +HIVL +    HQ  WGA+G+SRS  LM+K L + SFS LV +Y  ++  C H +  V VG PFS     +  V W+ LNI +
Sbjct:   44 LHAIQAYLSALEYNYTGRLYF----NVNKNR----SYKSIYGTAKEIISEALPIQCLEAVFVAAYLTAHGMPEYEGLNPSQQIDRVPISFKSR--SGDSTFRHIVLGV---RHQHVWGALGLSRSPALMNKDLKYKSFSDLVADYIENFVKCQHQVTKVYVGFPFSHDIHSSEKVQWRVLNIKI 214          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: CCA20486.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 89.0 bits (219), Expect = 2.600e-14
Identity = 61/178 (34.27%), Postives = 95/178 (53.37%), Query Frame = 0
Query:    3 LRALDEIQAHVSKAQSSMTRLTYEAHHPSLDKQRVGAQGMHKIDQVGRNILRKDKPIQCLEAVMVAAHLTTRL-PVHRLPLSFTTRVLQTGQTHKHIVLALTSESHQ--RWGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALNIDL 178
            L++   I+A +   QS +  L Y  +  +L       +    I    + ++    PIQCLEAV +A++LT  L  V R P+SFT+   +  + H+HIVL +    +Q   WGA+G+SRS +LM K   F+S S+L+E+Y+ S+    H L  + +GLP S        V W+ LN+ L
Sbjct:   34 LQSKQSIKAKLHTIQSYLNALEYN-YTGTLYFDTNKNRSFKSIVGTAKAMINDALPIQCLEAVFLASYLTASLAKVDRFPVSFTSTTGEKSK-HRHIVLVIRYYENQSANWGALGLSRSDQLMYKEATFSSLSSLLEDYKISFENVYHQLCKISIGLPLSHDIHSAEKVQWRMLNVHL 209          
BLAST of NO14G01020 vs. NCBI_GenBank
Match: XP_005777075.1 (hypothetical protein EMIHUDRAFT_101049 [Emiliania huxleyi CCMP1516] >EOD24646.1 hypothetical protein EMIHUDRAFT_101049 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 89.0 bits (219), Expect = 2.600e-14
Identity = 66/167 (39.52%), Postives = 94/167 (56.29%), Query Frame = 0
Query:    9 IQAHVSKAQSSMTRLTYEAHHPSLDKQRVGAQGMHKIDQVGRNILRKDKPIQCLEAVMVAAHLTT-RLPVHRLPLSFTTRVLQTGQTHKHIVLALTSESHQRWGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILESVLVGLPFSSKASCTLPVVWQALN 175
            +++ V   Q+ + +L Y  +   + KQR     M +I +  R I R   PI+C+EAV +AA+LT  +  + R+PLSF + V   GQT+KHIVLAL   S  +WG +G+SR  EL  K   + S + LV E+QRSYS   H L+ V  GLP   +     PV  Q L+
Sbjct:   59 VESKVVAVQAYIEKLGY--NFTEVRKQR----PMSRILETAREITRLSLPIKCVEAVFLAAYLTQGQRELERVPLSFKSSV--DGQTYKHIVLALKLNS--KWGCVGLSRRRELYYKKFGYDSLAGLVLEFQRSYSSVFHSLKRVKAGLPLPHE-----PVAGQRLD 210          
The following BLAST results are available for this feature:
BLAST of NO14G01020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KXZ49816.14.300e-1737.28hypothetical protein GPECTOR_19g267 [Gonium pector... [more]
XP_024375054.12.100e-1639.86uncharacterized protein LOC112282088 isoform X3 [P... [more]
XP_024375049.12.100e-1639.86uncharacterized protein LOC112282088 isoform X1 [P... [more]
KOO27113.11.100e-1536.75vasohibin-1 [Chrysochromulina sp. CCMP291][more]
GAQ90315.12.400e-1535.36hypothetical protein KFL_006260010 [Klebsormidium ... [more]
XP_783118.31.200e-1437.98PREDICTED: vasohibin-1-like isoform X3 [Strongyloc... [more]
OQS06287.11.500e-1437.86hypothetical protein THRCLA_01664 [Thraustotheca c... [more]
OQR96406.12.000e-1436.41hypothetical protein ACHHYP_15836 [Achlya hypogyna... [more]
CCA20486.12.600e-1434.27conserved hypothetical protein [Albugo laibachii N... [more]
XP_005777075.12.600e-1439.52hypothetical protein EMIHUDRAFT_101049 [Emiliania ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR024ngnoR024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01020.1NO14G01020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589927gene_5667Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01020.1NO14G01020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01020 ID=NO14G01020|Name=NO14G01020|organism=Nannochloropsis oceanica|type=gene|length=849bp
ATGCCATTGCGTGCACTAGATGAGATTCAAGCCCACGTCTCGAAGGCGCA
GTCCAGCATGACCCGTTTGACTTACGAGGCCCACCATCCGTCCCTCGACA
AGCAGCGAGTCGGGGCACAAGGCATGCACAAGATAGACCAGGTGGGACGC
AATATATTAAGAAAGGACAAGCCGATACAATGCCTTGAAGCTGTTATGGT
GGCGGCGCACCTTACGACCAGATTACCCGTTCACCGACTGCCTCTAAGTT
TCACGACGCGTGTGCTTCAGACGGGCCAGACACACAAGCACATTGTCCTT
GCGCTGACCTCCGAGAGCCATCAGCGATGGGGAGCTATGGGAATGAGCCG
ATCTTCAGAGCTCATGGACAAAGCTTTGATATTCGCGTCCTTCTCGGCAC
TGGTGGAGGAATACCAACGTTCCTATTCTATGTGCGGGCACATCCTCGAA
TCGGTTCTCGTGGGGCTGCCATTCTCTTCGAAGGCATCCTGCACACTACC
TGTTGTCTGGCAGGCCCTCAACATCGACTTGAAAGCACAGGGCGAAGACA
AGAGAAACACACCGTCTTCCGTTCCCTCTACTTGGAAAGCAGTGCTCGAT
CATTACGGGCAAAGCGTGCAGGCCTTGCTTGCGTTTCACCAACGGCACCC
AGACAGCAACCTGCCAAGTAGCCGTCTTTATGCGTGGCTTCAAGGCAAGA
AGGCACGGTTATGTTTCAAAGACTTGCTTATAATAAAAAACGGGGGGAAA
GGAGACCGGGGGGATGGTTGTGGTCGAATCAGCACGGGGAGAGGGAAGGG
CGGGAAGAGGAAGAGAGCGTGGCATGTGCCTTCCCCCTCGGGTGCATGA
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protein sequence of NO14G01020.1

>NO14G01020.1-protein ID=NO14G01020.1-protein|Name=NO14G01020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=283bp
MPLRALDEIQAHVSKAQSSMTRLTYEAHHPSLDKQRVGAQGMHKIDQVGR
NILRKDKPIQCLEAVMVAAHLTTRLPVHRLPLSFTTRVLQTGQTHKHIVL
ALTSESHQRWGAMGMSRSSELMDKALIFASFSALVEEYQRSYSMCGHILE
SVLVGLPFSSKASCTLPVVWQALNIDLKAQGEDKRNTPSSVPSTWKAVLD
HYGQSVQALLAFHQRHPDSNLPSSRLYAWLQGKKARLCFKDLLIIKNGGK
GDRGDGCGRISTGRGKGGKRKRAWHVPSPSGA*
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Synonyms
Publications