NO14G00900, NO14G00900 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G00900 vs. NCBI_GenBank
Match: EWM24729.1 (t-complex protein 1 subunit gamma [Nannochloropsis gaditana]) HSP 1 Score: 994.2 bits (2569), Expect = 1.600e-286 Identity = 499/538 (92.75%), Postives = 522/538 (97.03%), Query Frame = 0 Query: 1 MMNAPVMVLNANTKRETGRTAQLGNISAAKAVADIIRTTLGPRAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAQAEQFLHRNIHPTQIVAGYSKALQEAMLVCNSLAKPIDVKDKKALSQIVSACVGTKFSSRWGPFMVDLAVESVLKVVREVGPEGGGEGGVGNYKECDVKRYVRVEKIPGGELGESKVIDGVMFNKDVTHSKMRRRIERPRILLLDCPLEYKKGESQTNVEVKEEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGATIVSRPDEIQEGDIGTGCGLFEVRKIGDEYFVFLEACDQPKACTVLLRGASKDVLNEIERNLQDALQVVRNLVFESKLLPGGGATEMAVGQALARAASKIEGVQQFPFKAVGEALEVIPRTLAQNCGTNVLRIMTQLRAKHTQGPSTWGIDGEKGVLVQMEDLGVWEPYAVKVQTIKTAVEAACMLLRIDDVVSGMKKKK 539 MMNAPVMVLNANTKRETGRTAQLGNI+AAKAV+DI+RTTLGPRAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIIL GEMLAQAE FLHRNIHPTQIVAGYSKALQEA+ VCN+LAKPIDV DK+ALSQIVSACVGTKFSSRWGPFMVDLAV+SVLKVVR+VG EGG EGG YKECDVKRYVRVEKIPGGELG+SKVIDGVMFNKDVTHSKMRRRIE+PRILLLDCPLEYKKGESQTNVEVK+EEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGA IVSRPDEIQEGD+GTGCGLFEVRKIGDEYF FLE C+QP+ACTVLLRG SKDVLNE+ERNLQDALQVVRNLVFESKLLPGGGATEMAVGQALARA++++EGVQQ+P+KAVGEALEVIPRTLAQNCGTNVLRIMTQLRAKH QGP+TWGIDGEKG+LV ME LGVWEPYAVKVQTIKTAVEAACMLLRIDDVVSGMKKKK Sbjct: 1 MMNAPVMVLNANTKRETGRTAQLGNIAAAKAVSDIVRTTLGPRAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLAQAEPFLHRNIHPTQIVAGYSKALQEALKVCNALAKPIDVNDKQALSQIVSACVGTKFSSRWGPFMVDLAVDSVLKVVRQVGGEGGAEGG---YKECDVKRYVRVEKIPGGELGDSKVIDGVMFNKDVTHSKMRRRIEKPRILLLDCPLEYKKGESQTNVEVKQEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGAVIVSRPDEIQEGDVGTGCGLFEVRKIGDEYFAFLEQCEQPQACTVLLRGGSKDVLNEVERNLQDALQVVRNLVFESKLLPGGGATEMAVGQALARASTEVEGVQQWPYKAVGEALEVIPRTLAQNCGTNVLRIMTQLRAKHAQGPTTWGIDGEKGILVPMETLGVWEPYAVKVQTIKTAVEAACMLLRIDDVVSGMKKKK 535
BLAST of NO14G00900 vs. NCBI_GenBank
Match: CBN78089.1 (T-complex protein 1, gamma subunit [Ectocarpus siliculosus]) HSP 1 Score: 797.7 bits (2059), Expect = 2.200e-227 Identity = 402/535 (75.14%), Postives = 455/535 (85.05%), Query Frame = 0 Query: 2 MNAPVMVLNANTKRETGRTAQLGNISAAKAVADIIRTTLGPRAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAQAEQFLHRNIHPTQIVAGYSKALQEAMLVCNSLAKPIDVKDKKALSQIVSACVGTKFSSRWGPFMVDLAVESVLKVVREVGPEGGGEGGVGNYKECDVKRYVRVEKIPGGELGESKVIDGVMFNKDVTHSKMRRRIERPRILLLDCPLEYKKGESQTNVEVKEEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGATIVSRPDEIQEGDIGTGCGLFEVRKIGDEYFVFLEACDQPKACTVLLRGASKDVLNEIERNLQDALQVVRNLVFESKLLPGGGATEMAVGQALARAASKIEGVQQFPFKAVGEALEVIPRTLAQNCGTNVLRIMTQLRAKH-TQGPSTWGIDGEKGVLVQMEDLGVWEPYAVKVQTIKTAVEAACMLLRIDDVVSGMK 536 M+APVMVL NTKRETGR AQLGNI+AAKAVADIIRTTLGPR+MLKMLLDPMGGIVITNDG+CILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIILTGEML+ AE L R +HPTQIV GY++ALQ A+ C++LA+ IDV + L ++V A VGTKFS RWG +V +A+++V K VR V V E DVKRY RVEKIPGGE+ + V+DGVMFNKDVTHSKMRRRIE PR+LLLDCPLEYKKGESQTNVEV +EEDWNTLLRMEEE+IE +CA+IVAF PDIVITEKGVSDLAQHYL+KA +TAFRR+RK+DNNRIARAVGAT+VSRPDEIQE DIGTGCGLFEVRKIGDEYF FLE C KACTVLLRG SKDVLNE+ERNL DA+QVVRN+VFE +LLPGGGATEMAV QAL++ A ++EGVQQ+ FKA ALEVIPRTLAQNCG NV+R++TQLRAKH + TWGIDG GV+ M DLG+WEP+ VK QT KTAVEAACM+LRIDD+VSG+K Sbjct: 1 MSAPVMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAV-KRVRTV---------VDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMRDLGIWEPFTVKTQTYKTAVEAACMILRIDDIVSGIK 525
BLAST of NO14G00900 vs. NCBI_GenBank
Match: EJK51400.1 (hypothetical protein THAOC_29426 [Thalassiosira oceanica]) HSP 1 Score: 773.5 bits (1996), Expect = 4.400e-220 Identity = 383/550 (69.64%), Postives = 445/550 (80.91%), Query Frame = 0 Query: 5 PVMVLNANTKRETGRTAQLGNISAAKAVADIIRTTLGPRAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAQAEQFLHRNIHPTQIVAGYSKALQEAMLVCNSLAKPIDVKDKKALSQIVSACVGTKFSSRWGPFMVDLAVESVLKVVREVGP----EGGGEGGVGNYKECDVKRYVRVEKIPGGELGESKVIDGVMFNKDVTHSKMRRRIERPRILLLDCPLEYKKGESQTNVEVKEEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGATIVSRPDEIQEGDIGTGCGLFEVRKIGDEYFVFLEACDQPKACTVLLRGASKDVLNEIERNLQDALQVVRNLVFESKLLPGGGATEMAVGQALARAASKIEGVQQFPFKAVGEALEVIPRTLAQNCGTNVLRIMTQLRAKHTQG-------------PSTWGIDGEKGVLVQMEDLGVWEPYAVKVQTIKTAVEAACMLLRIDDVVSGMKKK 538 PVMVLN+ T+R GR AQLGNI+AA+AVADIIR+TLGPR+MLKMLLDPMGGIVITNDG+CILREVDVSHP AKSMIELSRAQDEEVGDGTTSVIIL GEML AE F N+HPT IV GY+ ALQEA+ +C LA +DVKD + + +V +C+GTKFSSRW M+D+A+++VL V RE G G E D+KRY +VEKIPGGE+ + V+ GVMFNKDVTHSKMRRRIE PRILLLD PLEYKKGESQTNVE+ +EEDWNTLL+MEEE++E MC EI+AF+PDIVITEKGVSDLAQHY KA +TAFRR+RK+DNNR+ARA GATIVSR DEI+E DIGTGCGLFE+RKIG+EYF F E C +PKACTV+LRG SKDVLNEIERNL DA+QVVRN+VF+++LLPGGGATEMAV L RA K+EGVQQ PF AVGEA+EVIPRTLAQNCG +V+R +TQLRAKH WGIDG G LV M++ G+WEP++VK+QTIKTAVE+ACM+LRIDD+VSG KKK Sbjct: 11 PVMVLNSKTQRTHGRQAQLGNIAAARAVADIIRSTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPTAKSMIELSRAQDEEVGDGTTSVIILAGEMLINAEPFARANVHPTVIVRGYNYALQEALSICEKLALTVDVKDTERMKDLVQSCIGTKFSSRWNDIMIDMALKAVLTVARETPMPSLLPGDGSSMYSQKMEVDIKRYAKVEKIPGGEISDCTVLSGVMFNKDVTHSKMRRRIENPRILLLDTPLEYKKGESQTNVEITDEEDWNTLLKMEEEYVENMCMEIIAFKPDIVITEKGVSDLAQHYFAKADITAFRRLRKTDNNRVARATGATIVSRTDEIRESDIGTGCGLFEMRKIGEEYFAFFEECKEPKACTVILRGGSKDVLNEIERNLTDAMQVVRNVVFDTRLLPGGGATEMAVSTGLRRAGLKLEGVQQGPFLAVGEAMEVIPRTLAQNCGVSVIRTVTQLRAKHAAAYEEAEQDGKDIFPKCNWGIDGTTGKLVDMDEFGIWEPFSVKIQTIKTAVESACMILRIDDIVSGSKKK 560
BLAST of NO14G00900 vs. NCBI_GenBank
Match: GAX92301.1 (T-complex protein 1 subunit gamma, variant [Pythium insidiosum]) HSP 1 Score: 763.8 bits (1971), Expect = 3.500e-217 Identity = 379/538 (70.45%), Postives = 444/538 (82.53%), Query Frame = 0 Query: 1 MMNAPVMVLNANTKRETGRTAQLGNISAAKAVADIIRTTLGPRAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAQAEQFLHRNIHPTQIVAGYSKALQEAMLVCNSLAKPIDVKDKKALSQIVSACVGTKFSSRWGPFMVDLAVESVLKVVREVGPEGGGEGGVGNYKECDVKRYVRVEKIPGGELGESKVIDGVMFNKDVTHSKMRRRIERPRILLLDCPLEYKKGESQTNVEVKEEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGATIVSRPDEIQEGDIGTGCGLFEVRKIGDEYFVFLEACDQPKACTVLLRGASKDVLNEIERNLQDALQVVRNLVFESKLLPGGGATEMAVGQALARAASKIEGVQQFPFKAVGEALEVIPRTLAQNCGTNVLRIMTQLRAKHTQGPSTWGIDGEKGVLVQMEDLGVWEPYAVKVQTIKTAVEAACMLLRIDDVVSGMKKKK 539 MM APVMVLN NT+RETGRTAQLGNI AAKAV+DI+RTTLGPR+MLKMLLDPMGGIV+TNDG+ ILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVII+ GE+L AE FL +HPT I+ G+ +AL+ ++ + +A IDV+++ + Q++ + VGTKFS R G + DLA+++VL VVR P G KE DVKRY +VEKIPGGEL +S+V+ GVMFNKDVTHSKMRRRIE PR+LLLDCPLEYKKGESQTNVE+ E+DWNTLLRMEEE+IE +CA+IVA +PDIVITEKGVSDLAQHY +KA +TAFRR+RK+DNNR+ARA GATIVSR DEIQE DIGT CGLFEVRKIGDEYF F E C P AC++LLRG SKDVLNEIERNLQDA+QV RN+VFE KLLPGGGATEM + L + A +IEGV+QFPF+AVGEALEVIPRTL QNCG +V+R+MT LRAK + +G+DG G + + DLGVWEP+ VK Q+IKTAVEAACMLLRIDD+VSG+ KKK Sbjct: 1 MMQAPVMVLNTNTRRETGRTAQLGNIEAAKAVSDIVRTTLGPRSMLKMLLDPMGGIVMTNDGNAILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIIIAGELLVVAEPFLSHQVHPTVIIRGFHRALEASLDIAKKMANVIDVQNRDQMRQLIQSSVGTKFSPRIGNLVSDLALQAVLTVVRTT-PSG--------KKEVDVKRYAKVEKIPGGELEDSRVLSGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVELTNEQDWNTLLRMEEEYIENLCAQIVAMKPDIVITEKGVSDLAQHYFVKANITAFRRLRKTDNNRVARATGATIVSRADEIQESDIGTKCGLFEVRKIGDEYFAFFEECKDPGACSILLRGGSKDVLNEIERNLQDAMQVARNVVFEPKLLPGGGATEMRIAHELKKRAEEIEGVEQFPFRAVGEALEVIPRTLLQNCGADVVRVMTALRAKQAESEEAYGVDGVTGKVTKSTDLGVWEPFEVKTQSIKTAVEAACMLLRIDDIVSGLAKKK 529
BLAST of NO14G00900 vs. NCBI_GenBank
Match: Q9LKI7.1 (RecName: Full=T-complex protein 1 subunit gamma; Short=TCP-1-gamma; AltName: Full=CCT-gamma [Conticribra weissflogii] >AAF81907.1 t-complex protein 1 gamma subunit [Conticribra weissflogii]) HSP 1 Score: 763.1 bits (1969), Expect = 5.900e-217 Identity = 382/551 (69.33%), Postives = 443/551 (80.40%), Query Frame = 0 Query: 5 PVMVLNANTKRETGRTAQLGNISAAKAVADIIRTTLGPRAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAQAEQFLHRNIHPTQIVAGYSKALQEAMLVCNSLAKPIDVKDKKALSQIVSACVGTKFSSRWGPFMVDLAVESVLKVVRE-----VGPEGGGEGGVGNYKECDVKRYVRVEKIPGGELGESKVIDGVMFNKDVTHSKMRRRIERPRILLLDCPLEYKKGESQTNVEVKEEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGATIVSRPDEIQEGDIGTGCGLFEVRKIGDEYFVFLEACDQPKACTVLLRGASKDVLNEIERNLQDALQVVRNLVFESKLLPGGGATEMAVGQALARAASKIEGVQQFPFKAVGEALEVIPRTLAQNCGTNVLRIMTQLRAKH--------TQGPST-----WGIDGEKGVLVQMEDLGVWEPYAVKVQTIKTAVEAACMLLRIDDVVSGMKKK 538 P+MVLN+ T+R TGR AQLGNI AA+AVADIIR+TLGPR+MLKMLLDPMGGIVITNDG+CILREVDVSHP AKSMIELSRA DEEVGDGTTSVIIL GEML AE F+ NIHPT IV GY+ ALQEA+ +C A +DV D + + +V +C+G KFSSRW M+D+A+++VL V RE PE E D+KRY +VEKIPGGE+ + V+ GVMFNKDVTHSKMRRRIE PRILLLD PLEYKKGESQTNVE+ +EEDWNTLL+MEEE++E MC EI+AF+PDIVITEKGVSDLAQHY KA +TAFRR+RK+DNNR+ARA GATIVSR DEI+E DIGTGCGLFE+RKIG+EYF F E C PKACT++LRG SKDVLNEIERNL DA+QVVRN+VF+ +LLPGGGATEMAV L +A K+EG+QQ PF AVG+A+EVIPRTLAQNCG +V+R +TQLRAKH T G T WGIDG G LV ME+ GVWEP++VKVQTIKTAVE+ACM+LRIDD+VSG KKK Sbjct: 8 PIMVLNSKTQRSTGRQAQLGNIQAARAVADIIRSTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPTAKSMIELSRAHDEEVGDGTTSVIILAGEMLINAEPFVRTNIHPTIIVRGYNYALQEALTICEEWALVVDVHDSERVKSLVQSCIGAKFSSRWNDIMIDMALKAVLTVSRESRTPSFTPEANDV--YAQKMEVDIKRYAKVEKIPGGEISDCAVLSGVMFNKDVTHSKMRRRIENPRILLLDTPLEYKKGESQTNVEITDEEDWNTLLKMEEEYVENMCMEIIAFKPDIVITEKGVSDLAQHYFAKANITAFRRLRKTDNNRVARATGATIVSRTDEIRESDIGTGCGLFEMRKIGEEYFAFFEECKDPKACTIILRGGSKDVLNEIERNLTDAMQVVRNVVFDPRLLPGGGATEMAVSVGLRKAGLKLEGIQQGPFLAVGDAMEVIPRTLAQNCGVSVIRTVTQLRAKHAAAYEDSETSGNGTFPKCNWGIDGTTGKLVDMEEFGVWEPFSVKVQTIKTAVESACMILRIDDIVSGSKKK 556
BLAST of NO14G00900 vs. NCBI_GenBank
Match: XP_008892864.1 (T-complex protein 1 subunit gamma [Phytophthora parasitica INRA-310] >ETI45634.1 T-complex protein 1 subunit gamma [Phytophthora parasitica P1569] >ETN21029.1 T-complex protein 1 subunit gamma [Phytophthora parasitica INRA-310] >ETO74277.1 T-complex protein 1 subunit gamma [Phytophthora parasitica P1976] >ETP15442.1 T-complex protein 1 subunit gamma [Phytophthora parasitica CJ01A1] >ETP43518.1 T-complex protein 1 subunit gamma [Phytophthora parasitica P10297] >KUG01735.1 T-complex protein 1 subunit gamma [Phytophthora nicotianae]) HSP 1 Score: 760.0 bits (1961), Expect = 5.000e-216 Identity = 374/538 (69.52%), Postives = 443/538 (82.34%), Query Frame = 0 Query: 1 MMNAPVMVLNANTKRETGRTAQLGNISAAKAVADIIRTTLGPRAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAQAEQFLHRNIHPTQIVAGYSKALQEAMLVCNSLAKPIDVKDKKALSQIVSACVGTKFSSRWGPFMVDLAVESVLKVVREVGPEGGGEGGVGNYKECDVKRYVRVEKIPGGELGESKVIDGVMFNKDVTHSKMRRRIERPRILLLDCPLEYKKGESQTNVEVKEEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGATIVSRPDEIQEGDIGTGCGLFEVRKIGDEYFVFLEACDQPKACTVLLRGASKDVLNEIERNLQDALQVVRNLVFESKLLPGGGATEMAVGQALARAASKIEGVQQFPFKAVGEALEVIPRTLAQNCGTNVLRIMTQLRAKHTQGPSTWGIDGEKGVLVQMEDLGVWEPYAVKVQTIKTAVEAACMLLRIDDVVSGMKKKK 539 MM APVMVLN NTKRETGRTAQLGNI AAKAV+DI+RTTLGPR+MLKMLLDPMGGIV+TNDG+ ILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GE+L AE FL +HPT I+ G+++AL ++ + LA PID+++K+ + +V + +GTKFS R G + DLA+++VL VVR KE DVKRY +VEKIPGGEL +S+V+ GVMFNKDVTHSKMRRRIE PR+LLLDCPLEYKKGESQTNVE+ ++DWNTLLR+EEE+IE +CA++VA +PD+VITEKGVSDLAQHY +KAG+TAFRR+RK+DNNR+ARA GATIVSR DEIQE DIGT CGLFEVRK+GDEYF F E C P AC++LLRG SKDVLNEIERNLQDA+QV RN+VFE LLPGGGATEM + L + A +IEGV+QFPF+AVGEALEVIPRTL QNCG +V+R+MT LRAK + ++G+DG G + E LGVWEP+ VK Q+IKTAVEAACMLLRIDD+VSG+ KKK Sbjct: 1 MMQAPVMVLNTNTKRETGRTAQLGNIEAAKAVSDIVRTTLGPRSMLKMLLDPMGGIVMTNDGNAILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLVVAEPFLGHQVHPTVIIRGFNRALNASLEIAKKLACPIDIENKEDMRNLVQSSIGTKFSPRVGNLVSDLALDAVLTVVRT---------SASGQKEVDVKRYAKVEKIPGGELEDSRVLKGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVELTNDQDWNTLLRLEEEYIENLCAQVVAMKPDVVITEKGVSDLAQHYFVKAGITAFRRLRKTDNNRVARATGATIVSRADEIQESDIGTKCGLFEVRKLGDEYFAFFEECKDPGACSILLRGGSKDVLNEIERNLQDAMQVARNVVFEPLLLPGGGATEMRLAHELKKRADEIEGVEQFPFRAVGEALEVIPRTLLQNCGADVVRVMTSLRAKQAETDESYGVDGVTGKVTPSEQLGVWEPFQVKTQSIKTAVEAACMLLRIDDIVSGLAKKK 529
BLAST of NO14G00900 vs. NCBI_GenBank
Match: ETK85594.1 (T-complex protein 1 subunit gamma, variant, partial [Phytophthora parasitica] >ETL39023.1 T-complex protein 1 subunit gamma, variant, partial [Phytophthora parasitica] >ETL92145.1 T-complex protein 1 subunit gamma, variant, partial [Phytophthora parasitica] >ETM45443.1 T-complex protein 1 subunit gamma, variant, partial [Phytophthora parasitica]) HSP 1 Score: 760.0 bits (1961), Expect = 5.000e-216 Identity = 374/538 (69.52%), Postives = 443/538 (82.34%), Query Frame = 0 Query: 1 MMNAPVMVLNANTKRETGRTAQLGNISAAKAVADIIRTTLGPRAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAQAEQFLHRNIHPTQIVAGYSKALQEAMLVCNSLAKPIDVKDKKALSQIVSACVGTKFSSRWGPFMVDLAVESVLKVVREVGPEGGGEGGVGNYKECDVKRYVRVEKIPGGELGESKVIDGVMFNKDVTHSKMRRRIERPRILLLDCPLEYKKGESQTNVEVKEEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGATIVSRPDEIQEGDIGTGCGLFEVRKIGDEYFVFLEACDQPKACTVLLRGASKDVLNEIERNLQDALQVVRNLVFESKLLPGGGATEMAVGQALARAASKIEGVQQFPFKAVGEALEVIPRTLAQNCGTNVLRIMTQLRAKHTQGPSTWGIDGEKGVLVQMEDLGVWEPYAVKVQTIKTAVEAACMLLRIDDVVSGMKKKK 539 MM APVMVLN NTKRETGRTAQLGNI AAKAV+DI+RTTLGPR+MLKMLLDPMGGIV+TNDG+ ILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GE+L AE FL +HPT I+ G+++AL ++ + LA PID+++K+ + +V + +GTKFS R G + DLA+++VL VVR KE DVKRY +VEKIPGGEL +S+V+ GVMFNKDVTHSKMRRRIE PR+LLLDCPLEYKKGESQTNVE+ ++DWNTLLR+EEE+IE +CA++VA +PD+VITEKGVSDLAQHY +KAG+TAFRR+RK+DNNR+ARA GATIVSR DEIQE DIGT CGLFEVRK+GDEYF F E C P AC++LLRG SKDVLNEIERNLQDA+QV RN+VFE LLPGGGATEM + L + A +IEGV+QFPF+AVGEALEVIPRTL QNCG +V+R+MT LRAK + ++G+DG G + E LGVWEP+ VK Q+IKTAVEAACMLLRIDD+VSG+ KKK Sbjct: 23 MMQAPVMVLNTNTKRETGRTAQLGNIEAAKAVSDIVRTTLGPRSMLKMLLDPMGGIVMTNDGNAILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLVVAEPFLGHQVHPTVIIRGFNRALNASLEIAKKLACPIDIENKEDMRNLVQSSIGTKFSPRVGNLVSDLALDAVLTVVRT---------SASGQKEVDVKRYAKVEKIPGGELEDSRVLKGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVELTNDQDWNTLLRLEEEYIENLCAQVVAMKPDVVITEKGVSDLAQHYFVKAGITAFRRLRKTDNNRVARATGATIVSRADEIQESDIGTKCGLFEVRKLGDEYFAFFEECKDPGACSILLRGGSKDVLNEIERNLQDAMQVARNVVFEPLLLPGGGATEMRLAHELKKRADEIEGVEQFPFRAVGEALEVIPRTLLQNCGADVVRVMTSLRAKQAETDESYGVDGVTGKVTPSEQLGVWEPFQVKTQSIKTAVEAACMLLRIDDIVSGLAKKK 551
BLAST of NO14G00900 vs. NCBI_GenBank
Match: XP_009526514.1 (hypothetical protein PHYSODRAFT_346179 [Phytophthora sojae] >EGZ17456.1 hypothetical protein PHYSODRAFT_346179 [Phytophthora sojae]) HSP 1 Score: 759.6 bits (1960), Expect = 6.600e-216 Identity = 374/538 (69.52%), Postives = 444/538 (82.53%), Query Frame = 0 Query: 1 MMNAPVMVLNANTKRETGRTAQLGNISAAKAVADIIRTTLGPRAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAQAEQFLHRNIHPTQIVAGYSKALQEAMLVCNSLAKPIDVKDKKALSQIVSACVGTKFSSRWGPFMVDLAVESVLKVVREVGPEGGGEGGVGNYKECDVKRYVRVEKIPGGELGESKVIDGVMFNKDVTHSKMRRRIERPRILLLDCPLEYKKGESQTNVEVKEEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGATIVSRPDEIQEGDIGTGCGLFEVRKIGDEYFVFLEACDQPKACTVLLRGASKDVLNEIERNLQDALQVVRNLVFESKLLPGGGATEMAVGQALARAASKIEGVQQFPFKAVGEALEVIPRTLAQNCGTNVLRIMTQLRAKHTQGPSTWGIDGEKGVLVQMEDLGVWEPYAVKVQTIKTAVEAACMLLRIDDVVSGMKKKK 539 MM APVMVLN NTKRETGRTAQLGNI AAKAV+DI+RTTLGPR+MLKMLLDPMGGIV+TNDG+ ILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GE+L AE FL +HPT I+ G+++AL ++ + +LA+ ID+ +K+ + +V + +GTKFS R G + DLA+++VL VVR KE DVKRY +VEKIPGGEL +S+V+ GVMFNKDVTHSKMRRRIE PR+LLLDCPLEYKKGESQTNVE+ ++DWNTLLR+EEE+IE +CA+IVA +PD+VITEKGVSDLAQHY +KAG+TAFRR+RK+DNNR+ARA GATIVSR DEIQE DIGT CGLFEVRK+GDEYF F E C P AC++LLRG SKDVLNEIERNLQDA+QV RN+VFE LLPGGGATEM + L + A +IEGV+QFPF+AVGEALEVIPRTL QNCG +V+R+MT LRAK + ++G+DG G + E+LGVWEP+ VK Q+IKTAVEAACMLLRIDD+VSG+ KKK Sbjct: 1 MMQAPVMVLNTNTKRETGRTAQLGNIEAAKAVSDIVRTTLGPRSMLKMLLDPMGGIVMTNDGNAILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLVVAEPFLSHQVHPTVIIRGFNRALNASIEIAKTLARTIDIDNKEDMRNLVQSSIGTKFSPRVGNLVSDLALDAVLTVVRTT---------ASGRKEVDVKRYAKVEKIPGGELEDSRVLKGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVELTNDQDWNTLLRLEEEYIENLCAQIVAMKPDVVITEKGVSDLAQHYFVKAGITAFRRLRKTDNNRVARATGATIVSRADEIQEADIGTKCGLFEVRKLGDEYFAFFEECKDPGACSILLRGGSKDVLNEIERNLQDAMQVARNVVFEPLLLPGGGATEMRLAHELKKRADEIEGVEQFPFRAVGEALEVIPRTLLQNCGADVVRVMTSLRAKQAETEESYGVDGVTGKVTPSEELGVWEPFQVKTQSIKTAVEAACMLLRIDDIVSGLAKKK 529
BLAST of NO14G00900 vs. NCBI_GenBank
Match: XP_002897020.1 (T-complex protein 1 subunit gamma [Phytophthora infestans T30-4] >EEY66501.1 T-complex protein 1 subunit gamma [Phytophthora infestans T30-4]) HSP 1 Score: 759.2 bits (1959), Expect = 8.600e-216 Identity = 373/538 (69.33%), Postives = 443/538 (82.34%), Query Frame = 0 Query: 1 MMNAPVMVLNANTKRETGRTAQLGNISAAKAVADIIRTTLGPRAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAQAEQFLHRNIHPTQIVAGYSKALQEAMLVCNSLAKPIDVKDKKALSQIVSACVGTKFSSRWGPFMVDLAVESVLKVVREVGPEGGGEGGVGNYKECDVKRYVRVEKIPGGELGESKVIDGVMFNKDVTHSKMRRRIERPRILLLDCPLEYKKGESQTNVEVKEEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGATIVSRPDEIQEGDIGTGCGLFEVRKIGDEYFVFLEACDQPKACTVLLRGASKDVLNEIERNLQDALQVVRNLVFESKLLPGGGATEMAVGQALARAASKIEGVQQFPFKAVGEALEVIPRTLAQNCGTNVLRIMTQLRAKHTQGPSTWGIDGEKGVLVQMEDLGVWEPYAVKVQTIKTAVEAACMLLRIDDVVSGMKKKK 539 MM APVMVLN NTKRETGRTAQL NI AAKAV+DI+RTTLGPR+MLKMLLDPMGGIV+TNDG+ ILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GE+L AE FL +HPT I+ G+++AL ++ + LA+PID+++K+ + +V + +GTKFS R G + DLA+++VL VVR KE DVKRY +VEKIPGGEL +S+V+ GVMFNKDVTHSKMRRRIE PR+LLLDCPLEYKKGESQTNVE+ ++DWNTLLR+EEE+IE +CA++VA +PD+VITEKGVSDLAQHY +KAG+TAFRR+RK+DNNR+ARA GATIVSR DEIQE DIGT CGLFEVRK+GDEYF F E C P AC++LLRG SKDVLNEIERNLQDA+QV RN+VFE LLPGGGATEM + L + A +IEGV+QFPF+AVGEALEVIPRTL QNCG +V+R+MT LRAK + ++G+DG G + E LGVWEP+ VK Q+IKTAVEAACMLLRIDD+VSG+ KKK Sbjct: 1 MMQAPVMVLNTNTKRETGRTAQLSNIEAAKAVSDIVRTTLGPRSMLKMLLDPMGGIVMTNDGNAILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLVIAEPFLGHQVHPTVIIRGFNRALNASLEIAKKLARPIDIENKEDMRNLVQSSIGTKFSPRVGNLVSDLALDAVLTVVRT---------SASGQKEVDVKRYAKVEKIPGGELEDSRVLKGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVELTNDQDWNTLLRLEEEYIENLCAQVVAMKPDVVITEKGVSDLAQHYFVKAGITAFRRLRKTDNNRVARATGATIVSRADEIQESDIGTKCGLFEVRKLGDEYFAFFEECKDPGACSILLRGGSKDVLNEIERNLQDAMQVARNVVFEPLLLPGGGATEMRLAHELKKRADEIEGVEQFPFRAVGEALEVIPRTLLQNCGADVVRVMTSLRAKQAETDESYGVDGVTGKVTPSEQLGVWEPFQVKTQSIKTAVEAACMLLRIDDIVSGLAKKK 529
BLAST of NO14G00900 vs. NCBI_GenBank
Match: OWZ17553.1 (T-complex protein 1 subunit gamma [Phytophthora megakarya]) HSP 1 Score: 759.2 bits (1959), Expect = 8.600e-216 Identity = 373/538 (69.33%), Postives = 444/538 (82.53%), Query Frame = 0 Query: 1 MMNAPVMVLNANTKRETGRTAQLGNISAAKAVADIIRTTLGPRAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAQAEQFLHRNIHPTQIVAGYSKALQEAMLVCNSLAKPIDVKDKKALSQIVSACVGTKFSSRWGPFMVDLAVESVLKVVREVGPEGGGEGGVGNYKECDVKRYVRVEKIPGGELGESKVIDGVMFNKDVTHSKMRRRIERPRILLLDCPLEYKKGESQTNVEVKEEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGATIVSRPDEIQEGDIGTGCGLFEVRKIGDEYFVFLEACDQPKACTVLLRGASKDVLNEIERNLQDALQVVRNLVFESKLLPGGGATEMAVGQALARAASKIEGVQQFPFKAVGEALEVIPRTLAQNCGTNVLRIMTQLRAKHTQGPSTWGIDGEKGVLVQMEDLGVWEPYAVKVQTIKTAVEAACMLLRIDDVVSGMKKKK 539 MM APVMVLN NTKRETGRTAQLGNI AAKAV+DI+RTTLGPR+MLKMLLDPMGGIV+TNDG+ ILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GE+L AE FL +HPT I+ G+++AL ++ + LA+ ID+++K+ + +V + +GTKFS R G + DLA+++VL VVR KE DVKRY +VEKIPGGEL +S+V+ GVMFNKDVTHSKMRRRIE PR+LLLDCPLEYKKGESQTNVE+ ++DWNTLLR+EEE+IE +CA++VA +PD+VITEKGVSDLAQHY +KAG+TAFRR+RK+DNNR+ARA GATIVSR DEIQE DIGT CGLFEVRK+GDEYF F E C P AC++LLRG SKDVLNEIERNLQDA+QV RN+VFE LLPGGGATEM + L + A +IEGV+QFPF+AVGEALEVIPRTL QNCG +V+R+MT LRAK + ++G+DG G + E+LGVWEP+ VK Q+IKTAVEAACMLLRIDD+VSG+ KKK Sbjct: 1 MMQAPVMVLNTNTKRETGRTAQLGNIEAAKAVSDIVRTTLGPRSMLKMLLDPMGGIVMTNDGNAILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLVVAEPFLRHQVHPTVIIRGFNRALNASIEIAKQLARTIDIENKEDMRNLVQSSIGTKFSPRVGNLVSDLALDAVLTVVRTT---------ASGRKEVDVKRYAKVEKIPGGELEDSRVLKGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVELTNDQDWNTLLRLEEEYIENLCAQVVAMKPDVVITEKGVSDLAQHYFVKAGITAFRRLRKTDNNRVARATGATIVSRADEIQEADIGTKCGLFEVRKLGDEYFAFFEECTDPGACSILLRGGSKDVLNEIERNLQDAMQVARNVVFEPLLLPGGGATEMRLAHELKKRADEIEGVEQFPFRAVGEALEVIPRTLLQNCGADVVRVMTSLRAKQAETDESFGVDGVTGKVTVSEELGVWEPFQVKTQSIKTAVEAACMLLRIDDIVSGLAKKK 529 The following BLAST results are available for this feature:
BLAST of NO14G00900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G00900 ID=NO14G00900|Name=NO14G00900|organism=Nannochloropsis oceanica|type=gene|length=2340bpback to top protein sequence of NO14G00900.1 >NO14G00900.1-protein ID=NO14G00900.1-protein|Name=NO14G00900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=539bpback to top Synonyms
Publications
|