NO14G00870, NO14G00870 (gene) Nannochloropsis oceanica

Overview
NameNO14G00870
Unique NameNO14G00870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2295
Alignment locationchr14:300434..302728 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:300434..302728 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G00870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL139nonsL139Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR024ngnoR024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002272NSK002272Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00870.1NO14G00870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589860gene_5656Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00870.1NO14G00870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00870 ID=NO14G00870|Name=NO14G00870|organism=Nannochloropsis oceanica|type=gene|length=2295bp
AGACGATGTGGCCATCGTTGAAGCTTGTCCCTCTGCCGCTTTCCATTGTT
GCAGTCGCCTCATGGCAAGACCACCCCGCTGGTCGGGCGCTGGGTGTGAC
CCACGAATCCTTCTGTTTGTCCTCGGCCGCGGTCACCAAGAAGCCTTTGG
CAAGATTGCGGCCCTCCTACGATAGCGAGGCATCTCTCTTGTCGCTCTCC
ACCATTTGGACCCATCCGACTCAAGTTGTGGCTTTTGCTATCAAGGCCTG
GGTGCGGCAGCGTTGGGAGCATGTGCTGGACTATCAGAACTTGTTGCGCG
AAGACGAATGCCCCATCACCCGGGAATACGACTGGAGACTCGTTGACTAC
AATGTAGAACCCCGTGGCCGGGCTTGGCATGATTTCCAAGAGCTTTCACA
GGCCATGCGGGAAGGAGGGAGAGAAGCCATGCCCAGCGTCGGGAGGACTC
GGCAAGCATGCAATTTTCTCTTAGACTGGGTTCGACAGCAGCTGGATACA
GCGGTAGCCTCCATACTAGAAGGCGTGAATCAGCTTCTGGTCATGCTCTG
TGGTCGAATTTTAGAAGCTGCATGGGCGTTTGTGTCAGGTGTTATGGGGT
GGACAGGAGGTTGGATTATGGCAATCGTTGGGGGCACCCTGCATGGCGTC
TTTCAAATAATTCAAGCACTGTGGATTATGTCCATTGCCTTGCTTCGCCT
CCGGTACCAATTCGTGGTCTTGGCTCTGGTTGCTGCCTGGAATCTGATCG
CAGGCACGGTTCTGGCGGTGTGGGGTTTTCTGGCGTCTTTGATGCAGGAC
GTCTTGCGGGGCTCTATACACCATCTCGTGGAGGCCGAGGATACGCTGGT
TACTGCTTTGGGTGGCAGTATGAGCACGGCTTGCAACACAGTTGTCAGAT
GGGGTATGATATTGCAGAATGCAGTCGTGGGAGGTTTTACGAGAGTGGGA
GGGGCAGTGGCGGCTGAGATTACGGATGTACGCAACTTGGTGATGGGGAC
CTGGGTTATGACCAAGGCGTTCGTTGCGGCCGTGCAACAATCGATAATCT
CGATCATATGGCAAGCTCAACAATCTGTCGTTCAAGCAGGCGCACACTTT
GCGACAAGTGTCCGCCACAGCATCGAAAATGTGCGGAAAAGCACTTTGCG
CGCAGCCCAGAGTATTGTTCCTTCAATGCCCACGGCATGGATCCGTACCT
GGTGGCGTATGATATCTTTGACTGATGCCGCGTTGCCCTGGATCATAGCG
GCTGTATCGTGCGCCTTTGGATGCTATATGTGGTGGTGGGCGCGGCGGGC
CGTGGCGACGACACCAGCACTAACTACAAAACTAGATGTGGGAGATGGAG
GAGGAGTTGCAGGACTAGAACGGATAGAGGGAGAGATAGAGGAGGAAAAC
CAAGGAGGGAAAGAAGAAGCCATAGGTGAGCCGCAGGCCATGGCAACAAT
CCGTCATGCACCCTTACCATCACCCGTTCAAGTCCCTGCTAGGGAACCTG
CAGGGGAAGTGATGGAACGGCCGCCGGCAGCGGAAGAGAAGAAAGATGAA
GAGGAAACGGAGGAAGAGAAAGAGGAATGGCTACTCTTTTCTCGCCATCG
TCAGCGCCAGGTGGAACGGCCTATACCTGGAGAGAGGGCCTGCCCTTCAT
CACCGGTGCGTGTTCAAGACCGAGAAGAAACAGCGACAATGGCCGCAGCG
CGAAGCGTGCAAACAGGGGAAGTCAGGTTGGAAACAGAAGAAGCCGCCAC
AGTCTTCTCTTTGCCACCTCCTTCATTTCCAACATTGGCAGCTCCTTTGC
CTCCTCCTCTACTTAAACCTCCACACCCTTCGCCGGCTCCTTCGAAGCCT
ACACTCATTCCCCTCTGCGTTGCCCTCCCTTTCATCTGTGCGGTCTTGGG
TGTGGAACATCCCGATACAGCAATAATGCGCGCAAGCATGGGTCCGAAGA
GATGGGATGATTTCTTGACTTTGTATCGCCAAGATTTTGCAGACCGTGGT
CTGGACACGGATGTGGAAGTGGCAAAACTAAAGCGACGGCCAGATGGGCG
CTGTACCTTGCCAGACTATGATATTAGGTATATGTTGTATCCGCCTGAAT
CTGATGTATCCCCCTACGAGTTTTTGGAGTTTTGCACGGCGGCTGAAGCA
GCAAACATCGTTTGGGAGCGATGGAGAAAACTAGAGGCGGAAGCTGAAGA
TGCACCAACGGTGGGTGGAGAGGAGGTGGGACAAGCGTGAAAGAAAAGGG
AGCGGCATCACATCTATAAACCAAAAACTGAAAAACGCATTGGCT
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protein sequence of NO14G00870.1

>NO14G00870.1-protein ID=NO14G00870.1-protein|Name=NO14G00870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=745bp
MWPSLKLVPLPLSIVAVASWQDHPAGRALGVTHESFCLSSAAVTKKPLAR
LRPSYDSEASLLSLSTIWTHPTQVVAFAIKAWVRQRWEHVLDYQNLLRED
ECPITREYDWRLVDYNVEPRGRAWHDFQELSQAMREGGREAMPSVGRTRQ
ACNFLLDWVRQQLDTAVASILEGVNQLLVMLCGRILEAAWAFVSGVMGWT
GGWIMAIVGGTLHGVFQIIQALWIMSIALLRLRYQFVVLALVAAWNLIAG
TVLAVWGFLASLMQDVLRGSIHHLVEAEDTLVTALGGSMSTACNTVVRWG
MILQNAVVGGFTRVGGAVAAEITDVRNLVMGTWVMTKAFVAAVQQSIISI
IWQAQQSVVQAGAHFATSVRHSIENVRKSTLRAAQSIVPSMPTAWIRTWW
RMISLTDAALPWIIAAVSCAFGCYMWWWARRAVATTPALTTKLDVGDGGG
VAGLERIEGEIEEENQGGKEEAIGEPQAMATIRHAPLPSPVQVPAREPAG
EVMERPPAAEEKKDEEETEEEKEEWLLFSRHRQRQVERPIPGERACPSSP
VRVQDREETATMAAARSVQTGEVRLETEEAATVFSLPPPSFPTLAAPLPP
PLLKPPHPSPAPSKPTLIPLCVALPFICAVLGVEHPDTAIMRASMGPKRW
DDFLTLYRQDFADRGLDTDVEVAKLKRRPDGRCTLPDYDIRYMLYPPESD
VSPYEFLEFCTAAEAANIVWERWRKLEAEAEDAPTVGGEEVGQA*
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Synonyms
Publications