NO14G00750, NO14G00750 (gene) Nannochloropsis oceanica

Overview
NameNO14G00750
Unique NameNO14G00750
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2711
Alignment locationchr14:265154..267864 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:265154..267864 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
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BLAST of NO14G00750 vs. NCBI_GenBank
Match: EWM24720.1 (hypothetical protein Naga_100180g8 [Nannochloropsis gaditana])

HSP 1 Score: 333.6 bits (854), Expect = 1.700e-87
Identity = 320/773 (41.40%), Postives = 391/773 (50.58%), Query Frame = 0 
Query:   13 EDTDLPRHQRRRPTMLSMDLVDTPSSEPMPVVGSMSNDTNSDTSSSGVRVSTSPMGKIRMVSEKLGSSVYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSLTPTRSSPASVNVRISSPLSREVGSKPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNMIGTPGGSSL-KKRHSSPLDEVDLHDLALDQSKYETGDHMQGGHYHTDRSDDHDEERKEEACDSPRVGSSNTR----GGGMFRPLSPLVMPILRSPRVVRILGVDNADKVAALFEGKNSPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSSISVSVPPPSVLQQNFTVALGLCLLACGLSQAGLEWYTMKLGSDESRWWAGLICALLGLATMXXXXXXXXXXXXXXXXXXXXXXXXXXXLQESVTLLVHLSYAFLVMGGAAAVVAALFFDLKFLDRLEQTNMCGASTEKLVMDNGLVLSETLGNACGFSSACACVQFTHLSPTGNVACMDFGRSSAAACPHVAFAMAGMVRVSVWLMGGLLFFITVLMLRARASVIAACTDQDRSRSVSRRRSSGSMVWRREEEEGPVVSSFGSNKVRALS-----VESQNRLKVQDMQQWEASKGQFKSWXXXXXXXXXXXXXXXXXXXXKGIAGLTMALEGQSGSRGGGARNLVLTPIPECNTPQPEEEMDGSSRDGR 776
            +  DLPRHQ  RP  LSM+LVD+P++EP+PV GSM    NSD ++     STSPMG IR++SE+LG+S+Y                                    P  SS     V +SSPLSRE+   P                                N   T   SSL  K HS  L   +L DL LD SK    +     ++ T    D DEERK+E C SP+V S  +     GG + RPLSP+V+P+LRSPRV RI G +  D+VA LFE  ++                                                                                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                QNFTVALGLCLLACGLSQAGLEWYTM LGSD + WWAGL+CA LGLATM                           +Q    L++   YA L+ GGA AVV ALFFDL FLDRLE  +MCGAS++KLV+DNGLVL +TLGNAC FSS CACVQFTH  P G VAC++F RS++++C    F +A +VRVSVWLMGG+LFF+T+L+LR RA+V +A  +    R+     + G +     ++   VVSSFGS+KVR++S                              XXXXXXXXXXXXXXXXXXX KG  G+ +  E +    GG  R+ +LTPIPEC+TP PEEE DG+    R
Sbjct:   10 DKNDLPRHQLNRPARLSMELVDSPTNEPLPVTGSMKG--NSDETNP----STSPMGTIRVMSERLGNSIYGKKERKKKADSAFSSSLRVITG--------------PFISSTTKTKVNVSSPLSREMSPPP----------HTPKKDGAVECEGSNVTPGEVDNSRDTSMSSSLHDKLHS--LGPGELEDLPLDSSK-GVFESCAPSYFET----DDDEERKDEPCFSPKVRSYKSAGAGPGGSLLRPLSPIVLPVLRSPRVRRIFGPEKTDRVATLFESSST--------------TEPQHPFASSSVPSSFPSAATLSTEAPARPLGSAHVASSSVLPPKQPPATFSRVTPMPCRDEATAPPLPHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNFTVALGLCLLACGLSQAGLEWYTMVLGSDYTTWWAGLLCAGLGLATM------VSQRRRTIVSGDHDNVDRAASVQALKRLVMRGLYALLLGGGAGAVVTALFFDLDFLDRLEHLDMCGASSDKLVLDNGLVLGDTLGNACAFSSGCACVQFTHPLPEGEVACLNFPRSASSSCAKAPFLIASIVRVSVWLMGGILFFMTILLLRGRAAVCSAYGE----RANQAEGAKGGI----SKDSERVVSSFGSSKVRSMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGKVGVALKPEMEPPRDGG--RSHLLTPIPECHTPMPEEEADGNGTRSR 715
The following BLAST results are available for this feature:
BLAST of NO14G00750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM24720.11.700e-8741.40hypothetical protein Naga_100180g8 [Nannochloropsi... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL139nonsL139Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR024ngnoR024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002281NSK002281Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00750.1NO14G00750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100180g8gene5765Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00750.1NO14G00750.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00750 ID=NO14G00750|Name=NO14G00750|organism=Nannochloropsis oceanica|type=gene|length=2711bp
ACAGATCTTTCGTAAACAAAAGACCTGTGCGACGACTCTTCATCGTTTCC
CTGTCGTGATGGTGTAGGAGCAGGGGAGCTGTTGCTAGATAACAAACACA
CTTTAGACCTTGGGTTGCAAGAACAAAAAGCTTCGCCAGACCCACGCGAC
CGGCAAGCGGGACACCAATACGCTCGCACGCTGAATCAATATAGACACAA
ACCTGCAATCATGGACGTGGACGATGGTCATCTCTCGCGTCTGGAGGAGG
ACACGGACCTGCCTCGTCACCAACGCAGGCGACCAACCATGCTTTCCATG
GATCTCGTGGACACGCCTTCTTCAGAGCCAATGCCCGTTGTGGGCTCTAT
GAGTAATGACACAAACAGCGACACCAGTAGCAGTGGTGTCCGGGTCAGCA
CCTCGCCCATGGGTAAGATCCGTATGGTCTCGGAGAAGTTGGGAAGCTCT
GTGTATAGCAAGAAGAAGAGAGACAAGGACAAGAAGAAACGCAGCAGCAA
TTTGCCCTCGTCCTCGTCATCGTCTTCGTCGTCCTCTGCCCTGACGGTCG
TAGGCAGCCTGACTCCCACCCGGTCTTCTCCGGCCAGCGTTAATGTCCGA
ATCTCATCTCCGCTTTCCAGAGAAGTCGGCTCCAAGCCCACCAATAGCAG
CAGCAGCAGCAGCTGCAGCTGTGGCAACACGAAGAACAGTAGCAATAATA
ATGATACCAACCACGAAAACAATCATAGAGGTCGAAATATGATTGGAACA
CCGGGTGGATCATCCCTCAAGAAAAGGCACAGCAGCCCCTTGGATGAGGT
GGACCTGCACGATTTGGCATTGGACCAGAGTAAGTACGAAACTGGCGACC
ACATGCAGGGCGGCCATTATCACACCGATAGAAGCGATGATCACGACGAG
GAGCGGAAGGAAGAAGCATGTGACTCCCCCCGGGTGGGTAGCAGCAATAC
CAGAGGGGGTGGTATGTTTCGGCCTCTCAGTCCATTGGTCATGCCTATAT
TGAGAAGCCCTCGGGTTGTGCGGATACTGGGAGTAGACAACGCGGACAAG
GTTGCTGCACTCTTCGAAGGCAAGAACAGCCCTGCCACACAGCAACAGCA
GCAACAAGAACAAGAACAACAAGAACAAGAACAAGAACAAGAACAACAAC
AACAACAACAGCAGCAGCAGCAGCAGCAGCGATCCCCCTCCTCCTCCTCC
TTCTCCTCCTCCGGTAGTACCATCAGCAGCCTGGCCAAAACGATGGCACA
CGCTTCTGTCCATGCCATGTCATCCTCCACCTCGTCATTTACCTCCTCTT
CCTCATCTACTCCAGTAATAGCGCCCAAGCCTgttcgtgccgatgccccc
gttgtgctgctgccactcccccccctccttcctctttttcccacgttcag
CCCTATCTCCTCGCCTCTGAAGCACCAGCAACCGCAGCAGCAGCAACAGC
TGCCGCTACTACCGCTGTCAGCAGCACCCAGCATAAGACACAACCGCGAC
ACAGCTCCTCAATCTCCGTTTCCGTCCCTCCACCCTCAGTGCTACAGCAG
AATTTTACTGTTGCCCTTGGCTTGTGTTTGTTGGCGTGTGGATTAAGTCA
GGCAGGGCTCGAGTGGTACACCATGAAATTGGGGAGCGATGAAAGCAGAT
GGTGGGCTGGCTTAATCTGTGCTCTCCTTGGCCTTGCCACGATGGCGGCT
AAGAGGGGGGGGGGGAACAATATCAACAGCAGCAGCAGCAGCGCCAACAG
CAGCAGTGGCACGGTGATGAGGTCGTTACAAGAATCGGTCACGCTGCTCG
TGCATCTGTCTTACGCGTTCTTGGTCATGGGTGGGGCGGCGGCAGTGGTG
GCTGCCTTATTTTTCGACTTGAAATTTCTCGATCGGTTGGAACAAACAAA
CATGTGCGGCGCCAGCACCGAAAAACTCGTTATGGATAACGGCCTTGTAC
TGAGTGAGACGTTGGGAAATGCTTGCGGGTTCTCGTCGGCGTGTGCGTGT
GTGCAATTCACCCATCTATCACCCACGGGGAATGTGGCGTGCATGGACTT
CGGTCGGTCGAGTGCGGCAGCTTGTCCGCACGTTGCATTTGCGATGGCGG
GGATGGTGCGAGTCAGCGTTTGGTTGATGGGAGGGCTGTTATTTTTCATC
ACTGTTTTGATGCTGAGGGCCCGCGCGTCGGTGATAGCGGCCTGCACGGA
CCAGGATAGGAGCCGCAGTGTGAGCAGGAGGAGGAGCAGTGGTAGCATGG
TGTGGCGGAGGGAGGAGGAGGAGGGGCCTGTGGTGTCGTCATTTGGGAGC
AACAAGGTACGGGCTTTATCTGTTGAGAGCCAGAATCGATTGAAAGTGCA
GGACATGCAGCAGTGGGAGGCGTCAAAGGGTCAATTCAAGTCCTGGTGGC
AACCCGGGGATGAGGACAGCAGTAGTGACGACGAGGAGGAGGAGGAGGGA
GGGGGGAAGGGAATAGCGGGGCTGACAATGGCACTGGAGGGACAGTCGGG
GTCTCGTGGTGGTGGGGCGCGAAACTTGGTCTTGACGCCGATTCCGGAGT
GCAACACCCCCCAGCCGGAGGAAGAGATGGATGGGAGCAGTCGAGACGGA
AGACTTCGGCAGGGGAATAAAGCCGAGAACCATGGCAGTGATGATTATGA
CGACGACGACGACGAGCAGGTGGCGCCTCCCCGTGGTCGGCAAGATGTCG
TGTACATTTAA
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protein sequence of NO14G00750.1

>NO14G00750.1-protein ID=NO14G00750.1-protein|Name=NO14G00750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=811bp
MDVDDGHLSRLEEDTDLPRHQRRRPTMLSMDLVDTPSSEPMPVVGSMSND
TNSDTSSSGVRVSTSPMGKIRMVSEKLGSSVYSKKKRDKDKKKRSSNLPS
SSSSSSSSSALTVVGSLTPTRSSPASVNVRISSPLSREVGSKPTNSSSSS
SCSCGNTKNSSNNNDTNHENNHRGRNMIGTPGGSSLKKRHSSPLDEVDLH
DLALDQSKYETGDHMQGGHYHTDRSDDHDEERKEEACDSPRVGSSNTRGG
GMFRPLSPLVMPILRSPRVVRILGVDNADKVAALFEGKNSPATQQQQQQE
QEQQEQEQEQEQQQQQQQQQQQQRSPSSSSFSSSGSTISSLAKTMAHASV
HAMSSSTSSFTSSSSSTPVIAPKPPYLLASEAPATAAAATAAATTAVSST
QHKTQPRHSSSISVSVPPPSVLQQNFTVALGLCLLACGLSQAGLEWYTMK
LGSDESRWWAGLICALLGLATMAAKRGGGNNINSSSSSANSSSGTVMRSL
QESVTLLVHLSYAFLVMGGAAAVVAALFFDLKFLDRLEQTNMCGASTEKL
VMDNGLVLSETLGNACGFSSACACVQFTHLSPTGNVACMDFGRSSAAACP
HVAFAMAGMVRVSVWLMGGLLFFITVLMLRARASVIAACTDQDRSRSVSR
RRSSGSMVWRREEEEGPVVSSFGSNKVRALSVESQNRLKVQDMQQWEASK
GQFKSWWQPGDEDSSSDDEEEEEGGGKGIAGLTMALEGQSGSRGGGARNL
VLTPIPECNTPQPEEEMDGSSRDGRLRQGNKAENHGSDDYDDDDDEQVAP
PRGRQDVVYI*
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Synonyms
Publications