NO14G00720, NO14G00720 (gene) Nannochloropsis oceanica

Overview
NameNO14G00720
Unique NameNO14G00720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1298
Alignment locationchr14:257448..258745 +

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Properties
Property NameValue
DescriptionProtein yippee-like
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:257448..258745 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004910Yippee/Mis18
IPR034751Yippee
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
BLAST of NO14G00720 vs. NCBI_GenBank
Match: EWM24716.1 (yippee-like protein [Nannochloropsis gaditana])

HSP 1 Score: 199.5 bits (506), Expect = 5.600e-48
Identity = 88/105 (83.81%), Postives = 98/105 (93.33%), Query Frame = 0
Query:    7 RCLDGPQVWCCSRCQTHLSSNDQIISKQFTGRGGRAFLFDKVVNVTTGPHEKRVLITGLHTVADIYCLDCETLVGWKYEEAFERSQKYKEGKYILERTRIIKDPD 112
            R LDGPQ+WCCS+C THLS+NDQIISKQFTGRGGRAFL+DKV+NVTTG HEKR+LITGLHTVADI+CLDC+ L+GWKYEEAFE SQKYKEGKYILE+T I KDPD
Sbjct:   15 RYLDGPQIWCCSQCWTHLSTNDQIISKQFTGRGGRAFLYDKVINVTTGQHEKRMLITGLHTVADIFCLDCQALLGWKYEEAFEESQKYKEGKYILEKTCITKDPD 119          
BLAST of NO14G00720 vs. NCBI_GenBank
Match: XP_004368245.1 (Protein yippeelike 1, putative [Acanthamoeba castellanii str. Neff] >ELR25490.1 Protein yippeelike 1, putative [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 158.3 bits (399), Expect = 1.400e-35
Identity = 70/108 (64.81%), Postives = 85/108 (78.70%), Query Frame = 0
Query:    1 MGRLFIRCLDGPQVWCCSRCQTHLSSNDQIISKQFTGRGGRAFLFDKVVNVTTGPHEKRVLITGLHTVADIYCLDCETLVGWKYEEAFERSQKYKEGKYILERTRIIK 109
            MG+LF   L GP V+ C  C THL+ +  IISK F  R G+A+LFDKVVNVT+GP E R+LITGLHTVAD++C DC+  VGWKYEEAFE SQKYKEGK+ILE+ +I+K
Sbjct:    1 MGKLFKSYLSGPGVYKCHSCDTHLAKHGDIISKAFQSRSGKAYLFDKVVNVTSGPKEDRILITGLHTVADVFCSDCQAYVGWKYEEAFEESQKYKEGKFILEKAKIVK 108          
BLAST of NO14G00720 vs. NCBI_GenBank
Match: GAQ91951.1 (hypothetical protein KFL_008890030 [Klebsormidium nitens])

HSP 1 Score: 154.1 bits (388), Expect = 2.700e-34
Identity = 66/109 (60.55%), Postives = 89/109 (81.65%), Query Frame = 0
Query:    1 MGRLFIRCLDGPQVWCCSRCQTHLSSNDQIISKQFTGRGGRAFLFDKVVNVTTGPHEKRVLITGLHTVADIYCLDCETLVGWKYEEAFERSQKYKEGKYILERTRIIKD 110
            MGR+F + L+GP+++ CS C+ H + +D+IISKQF GR GRA+LF+ VVNVT GP E R L TGLHTVADIYC  C+ ++GWKYE+A++ SQKYKEGKYI+E+ R++K+
Sbjct:   34 MGRIFRQYLNGPRIYSCSNCRCHSADHDEIISKQFQGRYGRAYLFNSVVNVTLGPKEDRHLTTGLHTVADIYCSCCQQILGWKYEQAYDESQKYKEGKYIIEKARMMKE 142          
BLAST of NO14G00720 vs. NCBI_GenBank
Match: XP_005704545.1 (hypothetical protein Gasu_45230 [Galdieria sulphuraria] >EME28025.1 hypothetical protein Gasu_45230 [Galdieria sulphuraria])

HSP 1 Score: 152.9 bits (385), Expect = 6.000e-34
Identity = 66/111 (59.46%), Postives = 88/111 (79.28%), Query Frame = 0
Query:    1 MGRLFIRCLDGPQVWCCSRCQTHLSSNDQIISKQFTGRGGRAFLFDKVVNVTTGPHEKRVLITGLHTVADIYCLDCETLVGWKYEEAFERSQKYKEGKYILERTRIIKDPD 112
            MGRLF   L G  ++CCS C+ HL+ ++ I+SKQF GR GRA+LF+ VVN++ GP E+RVLITGLHTVADIYC  C T++GWKY EA+E SQ+YKE KYI+ER +++K+ +
Sbjct:    1 MGRLFKTYLSGSTIYCCSTCKCHLAVHEDIMSKQFQGRHGRAYLFNNVVNISLGPKEERVLITGLHTVADIYCNVCHTVIGWKYLEAYEESQRYKENKYIVERKKMVKESE 111          
BLAST of NO14G00720 vs. NCBI_GenBank
Match: XP_002952928.1 (hypothetical protein VOLCADRAFT_82034 [Volvox carteri f. nagariensis] >EFJ45850.1 hypothetical protein VOLCADRAFT_82034 [Volvox carteri f. nagariensis])

HSP 1 Score: 152.5 bits (384), Expect = 7.800e-34
Identity = 65/109 (59.63%), Postives = 85/109 (77.98%), Query Frame = 0
Query:    1 MGRLFIRCLDGPQVWCCSRCQTHLSSNDQIISKQFTGRGGRAFLFDKVVNVTTGPHEKRVLITGLHTVADIYCLDCETLVGWKYEEAFERSQKYKEGKYILERTRIIKD 110
            MGR F + L GP+++ C+ C+ H + +D IISK F GR GRA+L +  VNV+ GP E+RVLITGLHTVADIYC  C T++GWKYE AFE SQKYKEGKYI+E+ +++K+
Sbjct:    1 MGRPFKQYLSGPRIYSCATCRAHAADHDDIISKAFQGRHGRAYLINNAVNVSLGPREERVLITGLHTVADIYCTSCNTVLGWKYEHAFEESQKYKEGKYIIEKAKVMKE 109          
BLAST of NO14G00720 vs. NCBI_GenBank
Match: PSC72292.1 (Yippee zincbinding [Micractinium conductrix])

HSP 1 Score: 152.5 bits (384), Expect = 7.800e-34
Identity = 65/109 (59.63%), Postives = 87/109 (79.82%), Query Frame = 0
Query:    1 MGRLFIRCLDGPQVWCCSRCQTHLSSNDQIISKQFTGRGGRAFLFDKVVNVTTGPHEKRVLITGLHTVADIYCLDCETLVGWKYEEAFERSQKYKEGKYILERTRIIKD 110
            MG LF + L G +++ CS+C+TH + + Q+ISK F GR GRA+LF  VVN+T GP E R+LITGLHTVADIYC+ C +++GWKYE A+E SQKYKEGKYILE+ +++K+
Sbjct:    1 MGVLFKQYLSGDKIYTCSQCKTHCTDHSQLISKAFQGRHGRAYLFSDVVNITVGPREDRMLITGLHTVADIYCITCNSVLGWKYEVAYEESQKYKEGKYILEKAKVMKE 109          
BLAST of NO14G00720 vs. NCBI_GenBank
Match: OSX80692.1 (hypothetical protein BU14_0033s0036 [Porphyra umbilicalis])

HSP 1 Score: 151.0 bits (380), Expect = 2.300e-33
Identity = 64/114 (56.14%), Postives = 89/114 (78.07%), Query Frame = 0
Query:    1 MGRLFIRCLDGPQVWCCSRCQTHLSSNDQIISKQFTGRGGRAFLFDKVVNVTTGPHEKRVLITGLHTVADIYCLDCETLVGWKYEEAFERSQKYKEGKYILERTRIIKDPDEGW 115
            MG+LF   L GP+V+ C++C+ HL+ ++ I+SK FTGR GRA+LF  VVNV  G HE+R+L+TG+HTVAD+ C+ C+T+VGWKY EA+E  QKYK+GK+ILE+ R+  D + GW
Sbjct:    1 MGKLFKVDLSGPRVYACTKCRCHLAKSEDIVSKSFTGRHGRAYLFSSVVNVAVGKHEERMLLTGMHTVADVVCIVCDTVVGWKYLEAYEEGQKYKQGKFILEKQRM--DKESGW 112          
BLAST of NO14G00720 vs. NCBI_GenBank
Match: XP_008800641.1 (PREDICTED: putative yippee-like protein Os10g0369500 [Phoenix dactylifera])

HSP 1 Score: 150.6 bits (379), Expect = 3.000e-33
Identity = 67/114 (58.77%), Postives = 88/114 (77.19%), Query Frame = 0
Query:    1 MGRLFIRCLDGPQVWCCSRCQTHLSSNDQIISKQFTGRGGRAFLFDKVVNVTTGPHEKRVLITGLHTVADIYCLDCETLVGWKYEEAFERSQKYKEGKYILERTRIIKDPDEGW 115
            MG LF+  L GP+V+ C RC+   +S+D IISK F+GR GRA+LF  VVN++ GP+E R L+TGLHTV DIYC  C+ ++GW+YE+A+E SQKYKEGKYILE+ R++K   EGW
Sbjct:    1 MGMLFVESLPGPKVFKCGRCKVDSASHDAIISKDFSGRYGRAYLFKSVVNISLGPNEDRYLLTGLHTVNDIYCSCCQQILGWRYEKAYEESQKYKEGKYILEKARMLK---EGW 111          
BLAST of NO14G00720 vs. NCBI_GenBank
Match: XP_004338414.1 (Yippee putative zincbinding protein [Acanthamoeba castellanii str. Neff] >ELR16401.1 Yippee putative zincbinding protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 149.8 bits (377), Expect = 5.100e-33
Identity = 67/111 (60.36%), Postives = 85/111 (76.58%), Query Frame = 0
Query:    1 MGRLFIRCLDGPQVWCCSRCQTHLSSNDQIISKQFTGRGGRAFLFDKVVNVTTGPHEKRVLITGLHTVADIYCLDCETLVGWKYEEAFERSQKYKEGKYILERTRIIKDPD 112
            MG++F   L G  V+ CSRC +HL+  D+I+SK F GR G+A+LF  VVNV+TGP E R+L+TGLHTVADI C DC ++VGWKYEEA E SQ+YK GKYILE+T++ K  D
Sbjct:    1 MGKVFKTYLSGSVVYTCSRCNSHLARADEIVSKAFQGRHGQAYLFSSVVNVSTGPREDRILLTGLHTVADISCNDCHSVVGWKYEEAVEESQQYKVGKYILEKTKLAKKTD 111          
BLAST of NO14G00720 vs. NCBI_GenBank
Match: XP_005834852.1 (hypothetical protein GUITHDRAFT_106421 [Guillardia theta CCMP2712] >EKX47872.1 hypothetical protein GUITHDRAFT_106421 [Guillardia theta CCMP2712])

HSP 1 Score: 149.4 bits (376), Expect = 6.600e-33
Identity = 65/111 (58.56%), Postives = 86/111 (77.48%), Query Frame = 0
Query:    1 MGRLFIRCLDGPQVWCCSRCQTHLSSNDQIISKQFTGRGGRAFLFDKVVNVTTGPHEKRVLITGLHTVADIYCLDCETLVGWKYEEAFERSQKYKEGKYILERTRIIKDPD 112
            MG++F   L G +++ CS C+THL+ +DQI+SK F GR GRAFLF  VVN+T GP E R+LITGLHTVAD+YC  C+ ++GWKY EAFE SQKYKEGK I+E+ ++  +P+
Sbjct:    1 MGKIFKIYLCGDRIYSCSGCRTHLAKHDQIVSKAFQGRHGRAFLFSNVVNITLGPKEDRILITGLHTVADVYCNCCQAVLGWKYVEAFEESQKYKEGKCIIEKAKMAMEPN 111          
The following BLAST results are available for this feature:
BLAST of NO14G00720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24716.15.600e-4883.81yippee-like protein [Nannochloropsis gaditana][more]
XP_004368245.11.400e-3564.81Protein yippeelike 1, putative [Acanthamoeba caste... [more]
GAQ91951.12.700e-3460.55hypothetical protein KFL_008890030 [Klebsormidium ... [more]
XP_005704545.16.000e-3459.46hypothetical protein Gasu_45230 [Galdieria sulphur... [more]
XP_002952928.17.800e-3459.63hypothetical protein VOLCADRAFT_82034 [Volvox cart... [more]
PSC72292.17.800e-3459.63Yippee zincbinding [Micractinium conductrix][more]
OSX80692.12.300e-3356.14hypothetical protein BU14_0033s0036 [Porphyra umbi... [more]
XP_008800641.13.000e-3358.77PREDICTED: putative yippee-like protein Os10g03695... [more]
XP_004338414.15.100e-3360.36Yippee putative zincbinding protein [Acanthamoeba ... [more]
XP_005834852.16.600e-3358.56hypothetical protein GUITHDRAFT_106421 [Guillardia... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL139nonsL139Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR024ngnoR024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002287NSK002287Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00720.1NO14G00720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO14G00720.2NO14G00720.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589811gene_5639Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100978g2gene5769Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00720.1NO14G00720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO14G00720.2NO14G00720.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00720 ID=NO14G00720|Name=NO14G00720|organism=Nannochloropsis oceanica|type=gene|length=1298bp
GGTTTGGATGCGATGATTAAAGCGTCGAATGTGGTGCGTGCGTAACAAGC
GGTAACAAGTGCTACAAAAACATCATCGATGTGGCGCCATGAGCTTCATG
GGCAGCACATACAAGAAATCAAGCCAGCAGAGAGTCGCACGGTTTTTAAG
GCTCGACTAAATCTTTTTCTCCTCCTCACACATACACCTCACCATCACGA
CGACGACAGGCACAAAGTACGTCAACACGTGTCGGGGCAGCAGCAGCAGA
GGACAAGTTTCCAACTTGCCTCCTCAAAGGTTCTCCAATCCCGCTATCTA
TAGCTTGCGCTCACGCACTTCTGTCCTCCCTACCCAAGGCAAGCGCACAA
CTCATTCAGTTCCTTGGGGGGATGGGACGCCTCTTCATAAGgtacgccgc
aaaccgtatctcactccctcgaaaacctccccacactgacagctcctccc
tctttccttcctccttccctccctccccttcctacatccaagGTGCTTGG
ACGGTCCTCAGGTTTGGTGCTGCTCGCGATGCCAAACGCACTTGTCATCG
AATGACCAAATTATAAGCAAGCAATTTACGGGCCGTGGGGGCCGCGCATT
TTTGTTTGACAAAGTgtaagttagcgattgaaaaagagggaagaagggaa
gaaaaaacctgaggcgagggaagaggaggcgctcaaacgtgctttgcaag
cgaaaagagaaattgtgtcatgatccgtgatgattttatcatcgtttctt
tccacactcgaggactcaaatgagtacccactcgctcctcctaacccttt
ttggattgatagGGTGAACGTCACCACGGGCCCTCATGAGAAGCGCGTGC
TCATCACAGGGCTGCACACCGTGGCGGATATATACTGCCTGGACTGCGAG
gtaggtaggtaggaaatggagcaaagcagcgaaggggggatggagtggag
ggctaccgagagcaagagtttttaaggggtggaagaagagaggcctgcat
attatcgcttgacccttctctcccccccctccctccctccctcctcctct
ctacctaaatctcaagACGCTCGTAGGCTGGAAGTACGAAGAAGCGTTTG
AGCGAAGCCAAAAATATAAGGAAGGCAAATATATCTTGGAAAGGACGCGG
ATCATCAAGGATCCCGACGAAGGGTGGTAAGGGAAGGAGGAAGGGAAGGA
GGGAGGCAGGGTAGGATGGTGTATATGACGGCGGTCTTGAGAGTATACGA
AGAGGGGAAGCATGTTCCGGAGGCGCTGGCTGACAAGGACCTTGACGG
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protein sequence of NO14G00720.1

>NO14G00720.1-protein ID=NO14G00720.1-protein|Name=NO14G00720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=115bp
MGRLFIRCLDGPQVWCCSRCQTHLSSNDQIISKQFTGRGGRAFLFDKVVN
VTTGPHEKRVLITGLHTVADIYCLDCETLVGWKYEEAFERSQKYKEGKYI
LERTRIIKDPDEGW*
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protein sequence of NO14G00720.2

>NO14G00720.2-protein ID=NO14G00720.2-protein|Name=NO14G00720.2|organism=Nannochloropsis oceanica|type=polypeptide|length=81bp
MGRLFIRCLDGPQVWCCSRCQTHLSSNDQIISKQFTGRGGRAFLFDKVVN
VTTGPHEKRVLITGLHTVADIYCLDCEVGR*
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Synonyms
Publications