NO14G00550, NO14G00550 (gene) Nannochloropsis oceanica

Overview
NameNO14G00550
Unique NameNO14G00550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length7388
Alignment locationchr14:218835..226222 +

Link to JBrowse

Properties
Property NameValue
DescriptionTetracycline resistance protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:218835..226222 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
IPR011701MFS
Homology
BLAST of NO14G00550 vs. NCBI_GenBank
Match: XP_005853686.1 (tetracycline resistance protein [Nannochloropsis gaditana CCMP526] >EKU22674.1 tetracycline resistance protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 555.1 bits (1429), Expect = 2.600e-154
Identity = 322/493 (65.31%), Postives = 375/493 (76.06%), Query Frame = 0
Query:   72 LAMSMWPTFLPSVLFYFSLFGIQPILSQFIIQLECDRMGASDCNSPEVSGASVLTIKYLYTLEFASATLTVGTLGAMSDYWGRKKAVILTSCGALFNICLLLLALTFXXXXXXXXXXXXXXXXXXXXXYRAALICLYVGTIVNGLSGSYGVYLTGIYAYAADITKRAPADRGVLFAKIVGSIAVGNTLGPLVSGLLLKSHGFYLPLLVNALLCLVTITLLGWRVKESLDPEDKPQEPFRPFRQHNTFVVLYQFLFTRQHGHTSHQREGG----------------XXXXXXXKVKVPPLFWLSACFCLAFSDLVGQGTIFIYYGKRVFHWKPDTLGYYEGLAGGSKGLVMLVLLPLLYRRLRRPLNDFRFVAIGFSLNMLYFLLLVLVPSPAAAFGTIPLNALSQVAYPHLRSIFSLAIAQDSQGQLFAALSAMETLMTALTPLVLNSIYNATVREFPQCVWLVLVFNLIAAEGCLYGAYRGMKM-EGGREGE 548
            LA S+WP  LPS  F+ +LFGIQPILSQF+IQLECDR+GASDC+S  +SG + LT+KYLY LEFASATLT+GTLGA SDY GR+K ++++SCG  F           XXXXXXXXXXXXXXXXXXXXX     ICL+V T VNGL+GSYG YL+G+YAYAAD+TKR P DRGV+FAKIVG +A+GNT GP +SGLLL   GF+LPL+V+A++  +T+ L+G  VKESLDP DKP EPFR  RQHNTFVVLYQFL+TRQH       EGG                XXXXXXX    P L  LS CFCLAF  LVGQGTIF+YY KR+F WK D LGYYE L GG KGLVMLVLLP LYR L RP NDF FVA+G +L+ LYF LLV +P+P AAF  IPLNALSQ AYPHLRS+FS AIAQDSQGQLFAALSA+ETL TA++PLVLNS+YNA+ R FP+CVWLVLVF L+ AE  LY A+R ++  EG ++GE
Sbjct:   64 LASSIWPLLLPSTFFFITLFGIQPILSQFLIQLECDRLGASDCDSANISGTAALTMKYLYALEFASATLTIGTLGAFSDYMGRRKVLLISSCGQ-FLYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICLFVATFVNGLTGSYGTYLSGVYAYAADLTKRKPTDRGVIFAKIVGCLALGNTAGPFLSGLLLNGAGFFLPLVVHAIMAGLTLVLIGCWVKESLDPGDKPSEPFRICRQHNTFVVLYQFLWTRQH----QAVEGGGRXXXXXXXXXXXXXXXXXXXXXXXXAPSLLALSGCFCLAFLGLVGQGTIFVYYAKRMFGWKADVLGYYEALTGGCKGLVMLVLLPFLYRLLHRPFNDFAFVAVGLALSCLYFALLVFLPTPVAAFSIIPLNALSQAAYPHLRSLFSRAIAQDSQGQLFAALSALETLTTAVSPLVLNSVYNASARAFPECVWLVLVFALVGAEASLYLAFRALRRNEGRKKGE 551          
BLAST of NO14G00550 vs. NCBI_GenBank
Match: EWM24747.1 (tetracycline-efflux transporter, putative [Nannochloropsis gaditana])

HSP 1 Score: 345.5 bits (885), Expect = 3.100e-91
Identity = 212/340 (62.35%), Postives = 247/340 (72.65%), Query Frame = 0
Query:   72 LAMSMWPTFLPSVLFYFSLFGIQPILSQFIIQLECDRMGASDCNSPEVSGASVLTIKYLYTLEFASATLTVGTLGAMSDYWGRKKAVILTSCGALFNICLLLLALTFXXXXXXXXXXXXXXXXXXXXXYRAALICLYVGTIVNGLSGSYGVYLTGIYAYAADITKRAPADRGVLFAKIVGSIAVGNTLGPLVSGLLLKSHGFYLPLLVNALLCLVTITLLGWRVKESLDPEDKPQEPFRPFRQHNTFVVLYQFLFTRQHGHTSHQREGG--------------------XXXXXXXKVKVPPLFWLSACFCLAFSDLVGQGTIFIYYGKRVFHWKPDTLG 392
            LA S+WP  LPS  F+ +LFGIQPILSQF+IQLECDR+GASDC+S  +SG + LT+KYLY LEFASATLT+GTLGA SDY GR+K ++++SCG  F           XXXXXXXXXXXXXXXXXXXXX     ICL+V T VNGL+GSYG YL+G+YAYAAD+TKR P DRGV+FAKIVG +A+GNT GP +SGLLL   GF+LPL+V+A++  +T+ L+G  VKESLDP DKP EPFR  RQHNTFVVLYQFL+TRQH       EGG                    XXXXXXX    P L  LS CFCLAF  LVGQGTIF+YY KR+F WK D LG
Sbjct:   64 LASSIWPLLLPSTFFFITLFGIQPILSQFLIQLECDRLGASDCDSANISGTAALTMKYLYALEFASATLTIGTLGAFSDYMGRRKVLLISSCGQ-FLYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICLFVATFVNGLTGSYGTYLSGVYAYAADLTKRKPTDRGVIFAKIVGCLALGNTAGPFLSGLLLNGAGFFLPLVVHAIMAGLTLVLIGCWVKESLDPGDKPSEPFRICRQHNTFVVLYQFLWTRQH----QAVEGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSLLALSGCFCLAFLGLVGQGTIFVYYAKRMFGWKADVLG 398          
BLAST of NO14G00550 vs. NCBI_GenBank
Match: XP_005855125.1 (hypothetical protein NGA_0101300 [Nannochloropsis gaditana CCMP526] >EKU21234.1 hypothetical protein NGA_0101300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 196.8 bits (499), Expect = 1.800e-46
Identity = 122/192 (63.54%), Postives = 150/192 (78.12%), Query Frame = 0
Query:  100 FIIQLECDRMGASDCNSPEVSGASVLTIKYLYTLEFASATLTVGTLGAMSDYWGRKKAVILTSCGALFNICLLLLALTFXXXXXXXXXXXXXXXXXXXXXYRAALICLYVGTIVNGLSGSYGVYLTGIYAYAADITKRAPADRGVLFAKIVGSIAVGNTLGPLVSGLLLKSHGFYLPLLVNALLCLVTITLL 292
            F  QLECDR+GASDC+S  +SG + LT+KYLY LEFASATLT+GTLGA SDY GR+K ++++SCG  F           XXXXXXXXXXXXXXXXXXXXX     ICL+V T VNGL+GSYG YL+G+YAYAAD+TKR P DRGV+FAKIVG +A+GNT GP +SGLLL   GF+LPL+V+A++  +T+ L+
Sbjct:   11 FSFQLECDRLGASDCDSANISGTAALTMKYLYALEFASATLTIGTLGAFSDYMGRRKVLLISSCGQ-FLYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICLFVATFVNGLTGSYGTYLSGVYAYAADLTKRKPTDRGVIFAKIVGCLALGNTAGPFLSGLLLNGAGFFLPLVVHAIMAGLTLVLI 201          
BLAST of NO14G00550 vs. NCBI_GenBank
Match: XP_004365258.1 (hypothetical protein CAOG_00387 [Capsaspora owczarzaki ATCC 30864] >KJE88803.1 hypothetical protein CAOG_000387 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 138.3 bits (347), Expect = 7.600e-29
Identity = 117/450 (26.00%), Postives = 196/450 (43.56%), Query Frame = 0
Query:   93 IQPILSQFIIQLECD----RMGAS-------------DCNSPEVSGASVLTIKYLYTLEFASATLTVGTLGAMSDYWGRKKAVILTSCGALFNICLLLLALTFXXXXXXXXXXXXXXXXXXXXXYRAALICLYVGTIVNGLSGSYGVYLTGIYAYAADITKRAPADRGVLFAKIVGSIAVGNTLGPLVSGLLLKSHGFYLPLLVNALLCLVTITLLGWRVKESLDPEDKPQEPFRPFRQHNTFVVLYQFLFTRQHGHTSHQREGGXXXXXXXKVKVPPLFWLSACFCLAFSDLVGQGTIFIYYGKRVFHWKPDTLGYYEGLAGGSKGLVMLVLLPLLYRRLRRPLNDFRFVAIGFSLNMLYFLLLVLVPSPAAAFGTIPLNALSQVAYPHLRSIFSLAIAQDSQGQLFAALSAMETLMTALTPLVLNSIYNATVREFPQCVWLVLVFNLI 526
            + P+L + +I LEC+     +G +              C    +   +     YL  +    + LT GTLGA+SD  GR+ A+++   GA+   C L L                           A+   L++   + GL G    +L   +AY+AD +   PA R      +  S+ +G T+GPL+ G L  ++   +PL V   L LV + +    + ESL PE +       +R+ N F  L   L    +G                +  +P    L A F + F+ +VG  ++ + Y K  F W   T G +  +    KGL + +LLP L  R R+ + + R   +     ML FLL     +    F    ++A+  +A P +R +FS+ +  D QG +FAA++++E + T ++P++ NSIY+AT         LV+   ++
Sbjct:   34 VVPLLQERVILLECNSYYTEIGRNMTPPFPIVDPDDKRCRDSTIESRAATVSMYLAIVVGVMSVLTTGTLGAISDRIGRRPAMLIPLAGAMLQACGLSLT----------------------HYLDASYPYLFIPQAIYGLMGGPSAFLMATFAYSADCSN--PAKRSSEIGMLESSLFLGGTIGPLLGGYLSSAYDMNVPLFVFGGL-LVPVVIWIVIIPESLTPERRVSA--IQWRRANIFGALSILLSANSYG---------------DRWILPA---LGASFAMMFNSVVGFASVMVLYTKLEFDWGQSTNGLFMAVNWLIKGLAIAILLPFLLLRCRKYVTEARIALVCLICMMLAFLLYAFAVNTTMFFMISLVDAIGYIAVPVMRGLFSMNVRVDQQGAVFAAIASIEAIFTVVSPVLFNSIYSATTDSQSNAALLVMASGIV 438          
BLAST of NO14G00550 vs. NCBI_GenBank
Match: XP_013762571.1 (tetracycline resistance protein [Thecamonas trahens ATCC 50062] >KNC50694.1 tetracycline resistance protein [Thecamonas trahens ATCC 50062])

HSP 1 Score: 112.1 bits (279), Expect = 5.800e-21
Identity = 131/482 (27.18%), Postives = 191/482 (39.63%), Query Frame = 0
Query:   59 AAATASASVRKPALAMSMW-PTFLPSVLFYFSLFGIQPI-LSQFIIQLECDRMGASDCNSPEVSGASVLTIKYLYTLEFASATLTVGTLGAMSDYWGRKKAVILTSCGALFNICLLLLALTFXXXXXXXXXXXXXXXXXXXXXYRAALICLYVGTIVNGLSGSYGVYLTGIYAYAADITKRAPADRGVLFAKIVGSIAVGNTLGPLVSGLLLKSHGFYLPLLVNALLCLVTITLLGWRVKESLDPEDKPQEPFRPFRQHNTFVVLYQFLFTRQHGHTSHQREGGXXXXXXXKVKVPPLFWLSACFCLAFSDLVGQGTIFIYYGKRVFHWKPDTLGYYEGLAGGSKGLVMLVLLPLLY--RRLRRPLNDFRFVAIGFSLNMLYFLLLVLVPSPAAAFGTIPLNALSQVAYPHLRSIFSLAIAQDSQGQLFAALSAMETLMTALTPLVLNSIYNATVREFPQCVWLVLVFNLIAAEGCLYGAYR 537
            A AT +A    P      W  TF+  +L Y +   +Q +  +Q +I   C+R   +DC+S  VS  + +   Y       +     GT+G +SD +GR+  V+L   G   N   L L   +                         L+ +  GT   GL G        IY   ADI      +R   F     S+ +G   G  VSG+L++ H  Y  L V   +    +TL+   + E+L P  + +     + + N F  L                  G           P L  L   F L++  +V  G+I I Y K   HW P  LG++ G     +   + +L PLL   + +RR      F  IG  +     L   L P     +    +  LS VA+P +RS+FSLA++   QG   AALSA ET+   L P   +  Y+AT      C   VLV  L+A  GC   A R
Sbjct:    3 ATATRAAVTPVPWRETRFWIYTFV--LLSYMATLMLQIVATAQMLIAEVCERGHYADCDSDTVSSKAAVWTLYGGLASSLTGVGVSGTVGVLSDKFGRRWVVVLPLVGLTANTLTLALFKAYSWPLW-------------------TLVAISGGT---GLFGGSPTMFMAIYTAVADIVPE--VERSKKFGYTEVSLYLGVMAGTSVSGILIE-HFDYKTLFVAMTVAGAALTLIAAAMPETLAPSQRVETV--SWAKANVFGAL------------------GVMTRPTRLGPWPVLAGLGLAFLLSYGAIVAFGSIVILYSKVKLHWTPRELGFFLGSQWIIRAACVSILSPLLLHTQNVRRIT---LFSVIGLCMQAGSMLTYALAPDTGIMYVGSAIGGLSAVAFPAIRSLFSLAVSAKEQGVALAALSAAETVANILLPAFASGFYSATDSSCLPCTLYVLVGLLLAGAGCAAVALR 434          
BLAST of NO14G00550 vs. NCBI_GenBank
Match: GAO51553.1 (hypothetical protein G7K_5652-t1 [Saitoella complicata NRRL Y-17804])

HSP 1 Score: 106.3 bits (264), Expect = 3.200e-19
Identity = 125/522 (23.95%), Postives = 207/522 (39.66%), Query Frame = 0
Query:   46 IPIKDDNSIHGTGAAATASASVRKPALAMSMWPTFLPSVLFYFSLFG------IQPILSQFIIQLECDRMGAS----------DCNSPEVSGASVLTIKYLYTLEFASATLTVGTLGAMSDYWGRKKAVILTSCGALFNICLLLLALTFXXXXXXXXXXXXXXXXXXXXXYRAALICLYVGTIVNGLSGSYGVYLTGIYAYAADITKRAPADRGVLFAKIVGSIAVGNTLGPLVSGLLLKSHGFYLPLLVNALLCLVTITLLGWRV-KESL------------------DPEDKPQ-EPFRPFRQHNTFVVLYQFLFTRQHGHTSHQREGGXXXXXXXKVKVPPLFWLSACFCLAFSDLVGQGTIFIYYGKRVFHWKPDTLGYYEGLAGGSKGLVMLVLLPLLYRRLRRPLNDFR-----------FVAIGFSLNMLYFLLLVLVPSPAAAFGTIPLNALSQVAYPHLRSIFSLAIAQDSQGQLFAALSAMETLMTALTPLVLNSIYNATVREFPQCVWLVL 521
            IP+  D  +    A +    S RK ++    W   LP+ LF    FG      I  ++S    + + +R G+S          +C  PEV   +      +  +  A +  T    GA SD  GRKK ++L++ GAL N  +++    +                            L VG  ++GL GS+   +    AYA+D TK  P  R V F  I GS+ +G  +GP+V   L+K+ G  + +   +L+  +   +  W V  ESL                  D E++ +   F  + +H          F  + G ++  R                 F L A   + F   +G  +I + Y   VF W+    GYY  + G ++  ++LV+LPL+ R  R   +D R            V     +  + +    L  + A  +    L A +    P L+S     + ++  G+L  ALS ++++   +TP VL  IY+ TV   P+ V  V+
Sbjct:   36 IPVAADTPLLRDRADSFQDPSRRKGSI---YW--LLPAFLFIALAFGASLAPRINLLISLVCKEYQQERFGSSLSVIIGGNNEECRIPEVQARAARLSLTINLVSAALSAYTTARYGAWSDRVGRKKVILLSAFGALCNDIIIIAVARYFDILGTKF--------------------LIVGAFIDGLLGSFTTGMAATNAYASDCTK--PDKRAVAFGYISGSLFLGIAIGPVVGAYLIKAFGDVIVVFYASLIVHIAYIIYAWVVLPESLSERRMATARAAYSTSKIQDEEERSRVGSFWQYVRHLNVFKPISIFFLSKEGTSARLRRN---------------FLLLAYIDIVFILNMGAFSIVVLYPTYVFGWQDLEQGYYLSIVGSTRVFILLVVLPLIMRYFRSETSDDRHGSGADRLDIWIVRAAAFVETIGYASKALAGNTAQYYLASALAASAGFGSPALQSALIKHVPKEKTGELLGALSVLQSISRVVTPTVLGLIYSWTVGTDPRAVLYVM 515          
BLAST of NO14G00550 vs. NCBI_GenBank
Match: EXX54445.1 (hypothetical protein RirG_234570 [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 102.8 bits (255), Expect = 3.500e-18
Identity = 96/438 (21.92%), Postives = 185/438 (42.24%), Query Frame = 0
Query:  114 CNSPEVSGASVLTIKYLYTLEFAS---ATLTVGTLGAMSDYWGRKKAVILTSCGALFNICLLLLALTFXXXXXXXXXXXXXXXXXXXXXYRAALICLYVGTIVNGLSGSYGVYLTGIYAYAADITKRAPADRGVLFAKIVGSIAVGNTLGPLVSGLLLKSHG-----FYLPLLVNALLCLVTITLLGWRV-KESLDPEDKPQEPFRPFRQHNTFVVLYQFLFTRQHGHTSHQREGGXXXXXXXKVKVPPLFWLSACFCLAFSDLVGQGTIFIYYGKRVFHWKPDTLGYYEGLAGGSKGLVMLVLLPLLYR---------------RLRRPLNDFRFVAIGFSLNMLYFLLLVLVPSPAAAFGTIPLNALSQVAYPHLRSIFSLAIAQDSQGQLFAALSAMETLMTALTPLVLNSIYNATVREFPQCVWLVLVFNLIAA 528
            CN+P+V     +T K+L      +   A   +G LG +SD  GRK+ ++++S G + +  +L+    F                         + C  +G +++GL+G +       YAYA D T   P  R V+F  + G++  G  +GP++   L+K         Y+ L+V  +L L  I +L   + KE L    K Q+  R  ++      LY+ L          Q+            K   L  L+AC+ L  + ++    +F+ Y   VF W     GY+  + G +K +V+ ++ P + +                ++  + +   + I F ++ L  ++     + +   G   + AL  +  P ++S+ +  I     G+L  A+S +++++  + P + + +Y+  V+  P  +W  +   LI A
Sbjct:   89 CNNPDVQS---VTSKFLAATNLCTAIPAIFVLGPLGTLSDRKGRKRTLLISSGGTILSTLVLIFVSNFLETF--------------------GIYCYLIGPLIDGLTGGFYALSEASYAYATDCTH--PTRRSVVFGWVQGAMFAGFAVGPIIGAWLVKVTDNLLSVNYVILVVYIMLFLFYIFILPESLSKEKLASNLKRQQEIRSRQKSWIHSFLYRILGALLVFRPPQQQNDDDKIPITFATKYSSLM-LAACYTLLSASIMAFTGVFVLYTSLVFKWSLLQQGYFVFMMGATKVVVLFIIYPAIVKFKKPILALFTKFEKLIIKELIFEVWVIRIIFLIDTLAHIMYGFATTGSVFTGATVIAALGIITTPAIKSLQTNLIPPSQIGRLLGAISVIDSILRIVVPPIFDGLYSIFVKTSPHLIWYCMSVLLILA 500          
BLAST of NO14G00550 vs. NCBI_GenBank
Match: PKK77005.1 (MFS general substrate transporter [Rhizophagus irregularis])

HSP 1 Score: 101.7 bits (252), Expect = 7.900e-18
Identity = 107/470 (22.77%), Postives = 198/470 (42.13%), Query Frame = 0
Query:  113 DCNSPEVSGASVLTIKYLYTLEFAS---ATLTVGTLGAMSDYWGRKKAVILTSCGALFNICLLLLALTFXXXXXXXXXXXXXXXXXXXXXYRAALICLYVGTIVNGLSGSYGVYLTGIYAYAADITKRAPADRGVLFAKIVGSIAVGNTLGPLVSGLLLKSHG-----FYLPLLVNALLCLVTITLLGWRV-KESLDPEDKPQEPFRPFRQHNTFVVLYQFLFTRQHGHTSHQREGGXXXXXXXKVKVPPLFW-------LSACFCLAFSDLVGQGTIFIYYGKRVFHWKPDTLGYYEGLAGGSKGLVMLVLLPLLYRRLRRPL--------------------------NDFRFVAIGFSLNMLYFLLLV---------LVPSPAAAFGTIPLNALSQVAYPHLRSIFSLAIAQDSQGQLFAALSAMETLMTALTPLVLNSIYNATVREFPQCVWLVLVFNLIAAEGCL 532
            DCN+ +V     +T ++L  L   S   A   +G LG +SD  GRK+ +++++ G + +   LLL   F                         +    VG++V G++G +       YAYA D T  +   R V+F  I G++  G ++GP + G ++K        +Y+ L++N +L    + +L   + +E+L    K Q         N+++  +  LF    G  +               KVP +F+       L+  + L  + ++    IF+ Y   VF W     GY+  +   +K  V+ +L P+L +  +R L                          N  R   I F + ++  +LL+         L  S +   G   ++AL  +  P ++S+ +  +     G+L  A+S +++++  + PL+ +++Y+  VR+FP  +W  +   L A  GCL
Sbjct:   90 DCNNADV---QAITSRFLMALNLCSAIPAIFVLGPLGTLSDRKGRKRTLLISTAGTILSTLNLLLVGNFLDTF--------------------GIYFFLVGSVVEGMTGGFFSLSEASYAYATDCT--SSTRRNVIFGWIQGAMFAGFSIGPTIGGWIVKITDNLLSVYYVKLVINIMLFFFFLFILPESLTEENLLTNLKRQRGLNSTISTNSWINSFISLFYNIFGPLAIFLPNDNSKQQNNNDKVPIVFFTKYSSLSLAITYTLLSASIMAMTNIFLLYTSLVFKWSLLEQGYFIFIQSVTKVFVLFILYPILVKFKKRILSLLSKFQKILSNNLGYNIIQGRVVEENQMRKELI-FEVWVIRLVLLIDALSHVAYGLATSGSVFIGVTIVSALGIITTPAIKSLQTNLVPPSQIGRLLGAISVIDSILRIIVPLIFDNLYSILVRKFPNLIWYFISALLFA--GCL 531          
BLAST of NO14G00550 vs. NCBI_GenBank
Match: XP_019026099.1 (putative tetracycline-efflux transporter [Saitoella complicata NRRL Y-17804] >ODQ54986.1 putative tetracycline-efflux transporter [Saitoella complicata NRRL Y-17804])

HSP 1 Score: 101.3 bits (251), Expect = 1.000e-17
Identity = 125/525 (23.81%), Postives = 207/525 (39.43%), Query Frame = 0
Query:   46 IPIKDDNSIHGTGAAATASASVRKPALAMSMWPTFLPSVLFYFSLFG------IQPILSQFIIQLECDRMGAS----------DCNSPEVSGASVLTIKYLYTLEFASATLTVGTLGAMSDYWGRKKAVILTSCGALFNICLLLLALTFXXXXXXXXXXXXXXXXXXXXXYRAALICLYVGTIVNGLSGSYGVYLTGIYAYAADITKRAPADRGVLFAKIVGSIAVGNTLGPLVSGLLLKSHGFYLPLLVNALLCLVTITLLGWRV-KESL------------------DPEDKPQ-EPFRPFRQHNTFVVLYQFLFTRQHGHTSHQREGGXXXXXXXKVKVPPLFWLSACF---CLAFSDLVGQGTIFIYYGKRVFHWKPDTLGYYEGLAGGSKGLVMLVLLPLLYRRLRRPLNDFR-----------FVAIGFSLNMLYFLLLVLVPSPAAAFGTIPLNALSQVAYPHLRSIFSLAIAQDSQGQLFAALSAMETLMTALTPLVLNSIYNATVREFPQCVWLVL 521
            IP+  D  +    A +    S RK ++    W   LP+ LF    FG      I  ++S    + + +R G+S          +C  PEV   +      +  +  A +  T    GA SD  GRKK ++L++ GAL N  +++    +                            L VG  ++GL GS+   +    AYA+D TK  P  R V F  I GS+ +G  +GP+V   L+K+ G  + +   +L+  +   +  W V  ESL                  D E++ +   F  + +H          F  + G ++  R                 F L A      + F   +G  +I + Y   VF W+    GYY  + G ++  ++LV+LPL+ R  R   +D R            V     +  + +    L  + A  +    L A +    P L+S     + ++  G+L  ALS ++++   +TP VL  IY+ TV   P+ V  V+
Sbjct:   20 IPVAADTPLLRDRADSFQDPSRRKGSI---YW--LLPAFLFIALAFGASLAPRINLLISLVCKEYQQERFGSSLSVIIGGNNEECRIPEVQARAARLSLTINLVSAALSAYTTARYGAWSDRVGRKKVILLSAFGALCNDIIIIAVARYFDILGTKF--------------------LIVGAFIDGLLGSFTTGMAATNAYASDCTK--PDKRAVAFGYISGSLFLGIAIGPVVGAYLIKAFGDVIVVFYASLIVHIAYIIYAWVVLPESLSERRMATARAAYSTSKIQDEEERSRVGSFWQYVRHLNVFKPISIFFLSKEGTSARLRRN---------------FLLLAYIDSDIVVFILNMGAFSIVVLYPTYVFGWQDLEQGYYLSIVGSTRVFILLVVLPLIMRYFRSETSDDRHGSGADRLDIWIVRAAAFVETIGYASKALAGNTAQYYLASALAASAGFGSPALQSALIKHVPKEKTGELLGALSVLQSISRVVTPTVLGLIYSWTVGTDPRAVLYVM 502          
BLAST of NO14G00550 vs. NCBI_GenBank
Match: EXX70157.1 (hypothetical protein RirG_090010 [Rhizophagus irregularis DAOM 197198w] >PKC13581.1 MFS general substrate transporter [Rhizophagus irregularis] >PKC70108.1 MFS general substrate transporter [Rhizophagus irregularis] >PKY14545.1 MFS general substrate transporter [Rhizophagus irregularis] >PKY42003.1 MFS general substrate transporter [Rhizophagus irregularis])

HSP 1 Score: 100.1 bits (248), Expect = 2.300e-17
Identity = 106/470 (22.55%), Postives = 198/470 (42.13%), Query Frame = 0
Query:  113 DCNSPEVSGASVLTIKYLYTLEFAS---ATLTVGTLGAMSDYWGRKKAVILTSCGALFNICLLLLALTFXXXXXXXXXXXXXXXXXXXXXYRAALICLYVGTIVNGLSGSYGVYLTGIYAYAADITKRAPADRGVLFAKIVGSIAVGNTLGPLVSGLLLKSHG-----FYLPLLVNALLCLVTITLLGWRV-KESLDPEDKPQEPFRPFRQHNTFVVLYQFLFTRQHGHTSHQREGGXXXXXXXKVKVPPLFW-------LSACFCLAFSDLVGQGTIFIYYGKRVFHWKPDTLGYYEGLAGGSKGLVMLVLLPLLYRRLRRPL--------------------------NDFRFVAIGFSLNMLYFLLLV---------LVPSPAAAFGTIPLNALSQVAYPHLRSIFSLAIAQDSQGQLFAALSAMETLMTALTPLVLNSIYNATVREFPQCVWLVLVFNLIAAEGCL 532
            DCN+ +V     +T ++L  L   S   A   +G LG +SD  GRK+ +++++ G + +   LLL   F                         +    VG++V G++G +       YAYA D T  +   R V+F  I G++  G ++GP + G ++K        +Y+ L++N +L    + +L   + +E+L    K Q         N+++  +  LF    G  +               KVP +F+       L+  + L  + ++    IF+ Y   VF W     GY+  +   +K  V+ +L P+L +  +R L                          N  R   I F + ++  +LL+         L  S +   G   ++AL  +  P ++S+ +  +     G+L  A+S +++++  + PL+ +++Y+  V++FP  +W  +   L A  GCL
Sbjct:   90 DCNNADV---QAITSRFLMALNLCSAIPAIFVLGPLGTLSDRKGRKRTLLISTTGTILSTLNLLLVGNFLDTF--------------------GIYFFLVGSVVEGMTGGFFSLSEASYAYATDCT--SSTRRNVIFGWIQGAMFAGFSIGPTIGGWIVKITDNLLSVYYVKLVINIMLFFFFLFILPESLTEENLLTNLKRQRGLNSTISTNSWINSFISLFYNIFGPLAIFLPNDNSKQQNNNDKVPIVFFTKYSSLSLAITYTLLSASIMAMTNIFLLYTSLVFKWSLLEQGYFIFIQSVTKVFVLFILYPILVKFKKRILSLLSKFQKILSKNLGYNIIQGRVVEENQMRKELI-FEVWVIRLVLLIDALSHVAYGLATSGSVFIGVTIVSALGIITTPAIKSLQTNLVPPSQIGRLLGAISVIDSILRIIVPLIFDNLYSILVKKFPNLIWYFISALLFA--GCL 531          
The following BLAST results are available for this feature:
BLAST of NO14G00550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853686.12.600e-15465.31tetracycline resistance protein [Nannochloropsis g... [more]
EWM24747.13.100e-9162.35tetracycline-efflux transporter, putative [Nannoch... [more]
XP_005855125.11.800e-4663.54hypothetical protein NGA_0101300 [Nannochloropsis ... [more]
XP_004365258.17.600e-2926.00hypothetical protein CAOG_00387 [Capsaspora owczar... [more]
XP_013762571.15.800e-2127.18tetracycline resistance protein [Thecamonas trahen... [more]
GAO51553.13.200e-1923.95hypothetical protein G7K_5652-t1 [Saitoella compli... [more]
EXX54445.13.500e-1821.92hypothetical protein RirG_234570 [Rhizophagus irre... [more]
PKK77005.17.900e-1822.77MFS general substrate transporter [Rhizophagus irr... [more]
XP_019026099.11.000e-1723.81putative tetracycline-efflux transporter [Saitoell... [more]
EXX70157.12.300e-1722.55hypothetical protein RirG_090010 [Rhizophagus irre... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002252NSK002252Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00550.1NO14G00550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO14G00550.2NO14G00550.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|630427gene_5624Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100513g3gene5739Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00550.1NO14G00550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO14G00550.2NO14G00550.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00550 ID=NO14G00550|Name=NO14G00550|organism=Nannochloropsis oceanica|type=gene|length=7388bp
TCCTGTCTGCCTGATTTGTTCACTTTGTTTTTGTTGCCTTTGCTTTTTCA
CATCGACACATATGCATGCAGCACTTTGCCTTTCATATTCCTTCATCATA
GGAAGACGGTTTTAAATGATTTTCCTTGTGCTTTTTAGTAAGGAAACTCT
TCTATATGAACATCCACATTGCGCAACACGCACTGACGTTGGATCTGGTG
TAGCAATCCCTCAGGTGCGCAGGCCAGGACCCCTGTCGAAGCTGCGGACT
GACCTTCAACGAAATCATTTACCAAAATATCTTGGGCCTGCCGTACAGTA
CGCGAAAGTCCTTCTGACCTCCTCCCCCACCGTCCACCAAGCGCATTCGA
CCGCCTATTTCCTTGTGCATGGTCTTATTTTCATCCTCTATTCCGATGCT
ATTCACCCCGTGCACAACATTTCCTCCGACAGCTGTCACGTAAATATGCA
TACCAAAGTGGACACACTGCCGCTGTGAGGACTGCTGTGACTGTTGTTGC
TCAATCAGATGCTTATTCAGCTCATCATTGATCTGATCCAGGAAGGTGGT
GAAGCCTTCAAGTAAGGCCACATCCCGTAAGGCCCACACAAGGGTAATAC
TTTTGAGACTAGTCATCATGCCTTTGCGAATGCAATGGCTAATATACGAC
AACAATGAAGTCAAAGGCATGAGACCGATTCCTCCTGCTACTAACACCAG
CTGATGGTATCGCTGTAGGTCAATCGAAAGCCTGCCATACGGTCCATCCA
CCAAAACGGCCAACGTGGGCGGCGACATGGGCGGCGCGCTTGGGGCATTT
TTGTTCTTCGCCATCGCGCCGTGACTGTGGGAGTTTGCCAGCGATCTGTA
TTTTGAAAATCAGTACACACAGCAAACCGAGCGATTCGAAGACCCGGGAT
TCTATTTGGGCACGACTCCTTGAGCAGCTACTTGGTAAAGACCATTGGTC
CAAGTACCCTTGCCCAGGCTCTTGATGTGAAGATGAAAGAGCGGCGCCTC
CGCTTCCGACTGCACCCCTTCATGCAGCAAGCCGGCTGTTGATATGGAAA
TAAGATGCCATTGTAGTAGAGACAATTGAGGAATGCAGACCCAGACATAG
CTTCCGGACTCTAAGGGTAAGGCCCACTTGCTCTCGCCGCCTATGCCATC
TGCGCCGCCATTGCTGCGGCTGCGTTTTTCCTGTCTGTGTCTGACGTCCA
CCTGCGTCACGTCACCGGGTAAGGCAGCAAGTGTGGCCCAAGTAGGATTG
TGGAGGATGTTATACCATCGCCAGGAAAAGTCCGCGATGTGTATAACGCA
AGGAATAACTAAATATTGCCAAGCTTCCGGGGCATGGAGCAAGACAAAGG
CAGTACCTGCGATGTAAAGGTAGTGTGCGTACCGGAACAGCTCATAGCAC
CACCGCCGGAGCATGGCCGTCAAGGACATAAATGTAAAGGAAAGGAAAGC
CAGGAGACTGTAGGCCACGACGACGCCACTGGCGAGAGGTGTGCGGTCCC
ACACGGGGCCCTTGGGCGTCATGCACACAAGATGGATGGTCATCGTGGCC
ATCGCTAGATACGACAACTGCCGGTGAAACTTGACGGACCGCTCGAATGA
AATGCCAAACAGCCGCACCCACACCGTTGTTTTGTTTACTGGTAAGAATG
TCATCATCAGATTGGTAAGCGCGGCTTTTCCGAAGGCAATTCCTGTTGTT
CGGACGCCCACTGCACCTTCCTTCATGGTCCAATACACCATGAAAGCTAA
TTGCAGGATGCCGTACGTCGCCATTATCCATATCTCGCCGTACTTCAGGT
TGAGGAAAGTGGGGATTGCACCTCCTGTGAACGTATTCATCCATGCGGAC
AGTTGAGTGGGGATCGGACCTAGGCGATGTTGCAAAAGGCTGTGGCCCCA
AGATGTCCGTTTAAGCCTTGTACACGTCAGAAGTAGACCAAGAAAAGGCA
GTAGTAGGAGCCAGTATCCTCCGAGGAGGAATCGCTCTATCGAAGGCTTG
CACGTGCCTGCGATCCAGTTTATTTTAATGGCTCCATGACGGTCGTGAAT
CGCAGGGTAGCCAGATTCGGCCCAGGCCCACATAAAGTTGGTAGTGCCAG
TGAGGTCCACAGGAGCGCTCGCACGAGCCAGCGACTGATCGTACCGCATG
TAGAGCTTACCAGCTGCACTTTGCAGCAAGATAGGCGTCATACCAACTGT
GGACATATTTATCTCCTTCAAATCGCTTGCCTGATAGCCTCGTAGCGCCA
ATGCTTGGGCTGCACCAGCGGCATAATCAAAGAGCAGGACTTGGTGTGCC
GGTGAAGTGACCATAGTAGTATCCTTATTAACCACTCCTCCCGCGATCCA
GCCTTCTCCATTCCCTTCCAGCTACAGCTCCACACCCGCCATATCGTCCT
TGATTTCCCAGGAGAGGGTGAGCCCGTGCGTTGAGTCTAGCGAGCACAAG
GACCGGAGGGATCCGATTGTAAAGACTCTGGCCCCGCTCTCTCGCATAAG
CACGGAGAGGGAGGAGGCGGCGGAGGAAGGGCTGGTAGCTTTAGTGTATT
GCGAGCCAAACCCCATTGGCTCGGGGGAGGTGAAGTAAGGGTCGAGACGC
GAGACCAAGGCAGTGGCTGTGTGTTCGTCAGGGAGGTTGGTAACGCGAAC
GACGAGCTCGGTGCTGCTGGCCTGGAGCTGGCCTGGAGGAGGCGGGAGTG
CCAGAGCCGGGGGAAGAGAGAGGGTGTGGTGGCCTTGAGGTTGACTCGGC
TGGGGCTCACAAAGGCAGCATCGGCGATAAGGGCCCTCGCGATACTGGTC
TCGAAGTTTTGGAGGGGGAGGGTGGTCAGGATAAGGGTAAAGTAGGCGGC
ATATACCTTGGTACCGCTAGGGGGATTGGAAGGAGGAGGAAAAGATGGCA
ATGGCACAGCTGCAGGTGGAACAGTTGCAGGTGGAGGGGGAGCAGTGGGA
GCAGTGGGTGCTGGAAGTGGGTCATCATCACTTTCGCTGCTGCTGCCGCT
TTCCACCTCCGGAGCTGTAGGTGTGGGAGAAGGCTGAGGAGAGGGAGGGA
TGGTCACAGGGGCATTGGGTGTGAGGGTGACGGTAGGAGTGATTCTCACG
GTCGTATGTCCACTCGCATGGCCGGCCCATATTTGGACGGTGCTCGAGGC
GTCAGAGGGTAGCTGGAGGAAAGGGTTCCTGGCTGCCAGGACCAGGGAGG
TATGATGAATGCGCATGTTCTCCATGCGGGAGGGAGGGGAATGGTGGCCC
ATTTTTTATTTTCACTTGCGATGGGGTAAGAGATCCTATAAGCACGGCAG
TGGTGTATCGCTGGGGATTGCTCGGATTGAAGAGAAGAAGAAATACCGTG
CTCAGTTTGTGTGGTGGGAGGAGGGTGGACGAGATGCAGGTATTCAGTAG
AAGTCGTGCTCGAGGCACATTCAAGACCCATTTGCATCATGCGCACTACG
CCAACAACCAGAATTCTAAATACTAATAACAACATACAAACTACGAGGAT
GCTATGTTACCTATAAGCCTAGACAAGCGTGGTGTGTATAGTGCTCTTGC
CGAATGATAAGACCGATGGACAGGCAAGGCCCACTTCCACACTCTCATCA
CCATCCGAGTGCCGTCTTTCCCAGCACAACAGATCGGAACAATCGGATCG
GAACGGATCGATTTTTATTGGGGTCGAGGGAGGATATACATGTATACATT
TGTCACACTGCACAGGAGGTGGTTCAAACGCATAAGACCTTGGCATCCTA
ACCGCGAGTATGTGATGCTCTGCACCATAGAGTGTCGGCCTACTCCGACT
CGCGCCACTAAAAACTCTCCCCGATGGTACACTCAAAAGAAACACGATAA
GATGAGCGTGTGCATGGTGTGGCTTGGCCAAAAACCAGCGAGCACGGCGG
ACATGCAGACGTTTTCCCCATGAAGACCTGCGTTATAAGCCTAACTCTTC
CACCAACACCCACCCAGGCACATCGATCTGCTCAATTGCCAGCCCCCCGC
CGTGAACCAGATGGGGGAAGGTGGAAGAAGCAAGGCAGCCTCCTCCCCAT
CCTCCTCCTCCTCCTCCACCTCCTCCCCATCCTCCTCCTCCTTCTCTTCC
ACCGCCACCTCCACGCCTTCTACGTTATTAACTCAACCCCTCATCATCCC
GATCAAGGACGACAACAGCATTCATGGTACCGGTGCCGCAGCCACAGCGT
CAGCAAGCGTGAGAAAACCGGCGCTAGCTATGTCCATGTGGCCTACTTTT
CTCCCCAGCGTCTTATTCTATTTCTCCCTCTTTGGGATCCAGCCCATTCT
CTCCCAGTTCATCATCCAGgttcgtccacacttccgtccgtccgtccgtt
gcttcctcctctccatcccctatgatagtcaccttccatagaaattatgt
cgggcttatcgaacgcccttcacgttcatattgccatgtacctatcttca
tgccaagcttacactttttcttacatccccccctcctctccctctcttcc
ttcgtctgtctccccttccctcctcctcattcctccagCTTGAATGCGAC
AGAATGGGAGCTAGCGATTGCAACAGCCCTGAGGTCAGCGGTGCTTCCGT
TTTGACGATCAAGgtacgtgccaacccctccctccctcctccctcacttc
ctttcttcctccctccttcacttacgccttctaattctccttcctccccc
tccctcctttcctctttccctcttttgatcctccctccctccctctttcc
ctccctccctcacttcctcagTACCTGTACACCCTGGAATTTGCCAGTGC
CACCCTGACGGTCGGAACCCTGGGAGCCATGTCAGACTACTGGGGGAGAA
AAAAAGCCGTCATCCTCACGAGCTGCGGCGCCCTCTTCAACATCTGCCTA
CTCCTCCTCGCCCTCACCTTCTCCGCGTCTTCCTCTTCTTTCTCCACCGC
CACCACGCCCGGGGTGCCATCCTCCCCTTCTTCGTATCGGGCGGCACTGA
TTTGTCTGTATGTGGGTACCATCGTAAACGGTTTATCAGGCTCCTACGGT
GTCTACCTCACCGGCATCTACGCGTACGCTGCAGgtacctcctcccttgc
cctcgctcccccgctctctctattctccccaccgaccaatccccggctcg
cggcgtcctgttgcatagaatcgatttacaatgatgcatatgcactgatg
catgtatctcaccctcacccccatctcccaaccaacccgcagATATCACG
AAGCGAGCCCCGGCGGATCGTGGTGTCCTCTTTGCGAAAATCGTCGGCTC
GATTGCAGTAGGCAACACGCTTGGCCCCCTCGTCTCCGGGCTGCTCCTCA
AGAGCCATGGCTTCTACTTGCCGCTGCTCGTTAATGCCCTGCTTTGTCTG
GTGACCATCACACTCCTGGgtgaggagggagggagggagggagggaagga
gggagggaaggagggaaggaggggccttggcatgcaatcccaaaactttc
cttaacccccccccttcctctctccctttctcagGCTGGCGGGTGAAGGA
GTCGCTGGACCCGGAAGATAAACCCCAAGAGCCGTTTCGGCCGTTTCGTC
AACACAACACCTTTGTGGTGCTGTATCAGTTTCTCTTCACCCGCCAGCAC
GGCCACACCAGCCACCAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
CAAGGTGAAGGTCCCGCCGTTGTTTTGGCTGTCGGCGTGTTTTTGCCTTG
CCTTTTCGGATCTGGTAGGACAGGGGACAATATTCATATACTACGGAAAG
AGGGTCTTTCATTGGAAGCCAGACACACTCGGgtacgtcctccccttttc
ccccccttccctcccccccttccccctctctccccttcctctctccatca
ctttcgtcaagatctcgtccgtgtgcgcatgtgagccttccccccccctc
ccccccccccccctccctccctccctcctccccgtcctcgaccaccggca
cgccacccattcttccctccctccctccctccttccccccctccctccct
tccccgcagCTACTACGAAGGCCTTGCGGGCGGCAGCAAAGGCCTGGTCA
TGCTCGTCCTCCTTCCCCTCCTCTATCGGCGCCTCCGCCGACCCTTGAAC
GATTTCCGCTTCGTCGCCATCGGCTTCTCCTTAAACATGCTCTACTTCCT
CCTCCTCGTCCTTGTCCCCTCCCCCGCCGCTGCCTTTGGCACCATTCCCT
TGAATGCCCTAAGCCAAGTAGCTTACCCCCACCTCCGGTCCATCTTCTCC
CTCGCCATCGCGCAAGACTCACAAGGACAGCTTTTCGCGGCCCTCTCTGC
Ggtaatcgtccattcctccctccctccccctacctcctccctctctgcct
ccctccctccttccctcctttctcagcttttggccacatccctttctccc
tccttccctccctcccctctctcgtcttgtccccagatggaaaccctcat
gacggccctcacgcccttggttctcaacatcctcctcatcctccctccct
ccctccctccctccctcccctccctcgccttgtccccagATGGAAACCCT
CATGACGGCCCTCACGCCCTTGGTTCTCAACAGTATTTACAACGCCACCG
TGAGGGAGTTTCCTCAGTGCGTCTGGCTGGTCTTAGTCTTCAACCTTATT
GCCGCAGAAGGCTGCCTGTACGGGGCCTACAGGGGAATGAAGATGGAGGG
AGGGAGGGAGGGAGAGGCGAAGAAGGAGGAGGGGGCCTTGCTTATCTTGG
CGGGTGAGGAGGAAGGGGAGGAGGAAGAACGAAAGGTGGGGGTATAAGGG
CGGTGCTTGAGCGATTATGTGTGTGTATGACAGATGAATAGATGGATAGG
TAGGAAGAGTGAGAGAGAAAGAGAGTAAGAGAGAAGGAGGGAGGGAAGGA
AAAAGAAAGGAAGAGTAGACGGGAAGGATGGAGTAGAGACGAGGGCGAAG
ACAGAATGTGAAAATTTAAGTGGGAAGGGAGGCGGGAGGATGAGGAGAGG
GAGTAAAACGAAGTGACTCGTCGAACAGAAATGGTAAGAAATTAGATTTT
GACGACGCCTGCGAACTGTATATATTTCATGCTAAGATTTGAAGCATGAT
TTTGATCCAGGGAAAGGGAGAGGGAGAGAATAAATAGAAGGTAGGGGATG
GGTAGGAGGTAGGTGAGAGACGGGAGTGCGACGACGTTTGCGTATTAAAT
TTACAAGGTTGATTCACCGGGTGAGATATTTCGATTATTGCTGTGTCCGT
GACGGCCATAGGAAATTGCGAAACAATATAAATTTTTATAAAGGAGGACG
AAACGAGCGCAACAGGGAGACGGTTGTCATGAAGATAT
back to top

protein sequence of NO14G00550.1

>NO14G00550.1-protein ID=NO14G00550.1-protein|Name=NO14G00550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=574bp
MGEGGRSKAASSPSSSSSSTSSPSSSSFSSTATSTPSTLLTQPLIIPIKD
DNSIHGTGAAATASASVRKPALAMSMWPTFLPSVLFYFSLFGIQPILSQF
IIQLECDRMGASDCNSPEVSGASVLTIKYLYTLEFASATLTVGTLGAMSD
YWGRKKAVILTSCGALFNICLLLLALTFSASSSSFSTATTPGVPSSPSSY
RAALICLYVGTIVNGLSGSYGVYLTGIYAYAADITKRAPADRGVLFAKIV
GSIAVGNTLGPLVSGLLLKSHGFYLPLLVNALLCLVTITLLGWRVKESLD
PEDKPQEPFRPFRQHNTFVVLYQFLFTRQHGHTSHQREGGREGGREGKVK
VPPLFWLSACFCLAFSDLVGQGTIFIYYGKRVFHWKPDTLGYYEGLAGGS
KGLVMLVLLPLLYRRLRRPLNDFRFVAIGFSLNMLYFLLLVLVPSPAAAF
GTIPLNALSQVAYPHLRSIFSLAIAQDSQGQLFAALSAMETLMTALTPLV
LNSIYNATVREFPQCVWLVLVFNLIAAEGCLYGAYRGMKMEGGREGEAKK
EEGALLILAGEEEGEEEERKVGV*
back to top

protein sequence of NO14G00550.2

>NO14G00550.2-protein ID=NO14G00550.2-protein|Name=NO14G00550.2|organism=Nannochloropsis oceanica|type=polypeptide|length=427bp
MSDYWGRKKAVILTSCGALFNICLLLLALTFSASSSSFSTATTPGVPSSP
SSYRAALICLYVGTIVNGLSGSYGVYLTGIYAYAADITKRAPADRGVLFA
KIVGSIAVGNTLGPLVSGLLLKSHGFYLPLLVNALLCLVTITLLGWRVKE
SLDPEDKPQEPFRPFRQHNTFVVLYQFLFTRQHGHTSHQREGGREGGREG
KVKVPPLFWLSACFCLAFSDLVGQGTIFIYYGKRVFHWKPDTLGYYEGLA
GGSKGLVMLVLLPLLYRRLRRPLNDFRFVAIGFSLNMLYFLLLVLVPSPA
AAFGTIPLNALSQVAYPHLRSIFSLAIAQDSQGQLFAALSAMETLMTALT
PLVLNSIYNATVREFPQCVWLVLVFNLIAAEGCLYGAYRGMKMEGGREGE
AKKEEGALLILAGEEEGEEEERKVGV*
back to top
Synonyms
Publications