NO14G00530, NO14G00530 (gene) Nannochloropsis oceanica

Overview
NameNO14G00530
Unique NameNO14G00530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2491
Alignment locationchr14:210399..212889 +

Link to JBrowse

Properties
Property NameValue
DescriptionAnkyrin repeat family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:210399..212889 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR011011Znf_FYVE_PHD
IPR017455Znf_FYVE-rel
IPR001388Synaptobrevin
IPR020683Ankyrin_rpt-contain_dom
IPR000306Znf_FYVE
IPR002110Ankyrin_rpt
Homology
The following BLAST results are available for this feature:
BLAST of NO14G00530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00530.1NO14G00530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00530.1NO14G00530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00530 ID=NO14G00530|Name=NO14G00530|organism=Nannochloropsis oceanica|type=gene|length=2491bp
ATGAGATCGGCAGAGACGAGAGAGGGGGGCAAGGTGATTTATGCGGAGGA
AGCGGACAAAGATGCAGACGAGGAGGAGGAGGAGGAGGAGCAGGCGGACG
ATGGGAGGGAGGGAAGGGTGATGGCGTTTTTGGCACAGAGGGATGAATAT
GGATGGCAGCCCATTCATTACGCTGCGGCCTGTGGGAGTGGGAGGGTCCT
GGTTCACTTGTTAGAGAAGACTGGGAAAGGAGGACGAGGGAGGAGAAGGG
GAGGGGTTGATGCCATGACGGAGGAGGGGGAGACCCCGCTGCATGTGGCA
GCAAGATTTGGACAGATAGGGATTGTGAAGCTGCTGCTGGCAAAGGGGGC
ATCCGTGATGATCAGAAACGATGTAGGGTGCACGCCTTTATGGGCCACTG
TGAACTCCTTGCGGGGGACAGGGAGGGAGGGAGGGGGGTGGGGCGGGAGG
GGGAAAGGGATGGGGGGGAAGGCAGAGAGAATCGTCTTGCTCTTGCTCGA
AGCGGCAACCAACACCTCGATGGCGCTCACACAGTTGAATACTCCTACTG
CGACTGTTCCTAGTGCTGCTGCTGCTGATGATGATGATGCCGCCGCTGTT
GGTGATAGTGGTGATGGGGGGGTAGAGGAAGGGATGGGTTCGTCTCCTTT
GCATGTCGCGGTGTCTTTTGCAGTCGCCGTTGAAAGAGAGGTGCTAGCAA
GGAGAGTGCGTCTCTTAGAGGAGGAGGGAATAGACGTGAGAAAGAAAGAG
ATAGAGTGGGAGGAAGAGGAGAAATGGATGAGGAAGGAGGCTGAGGGGAT
GGTGCGGTTGTTGTTGGAGAGAGGGGCTGATGTACAAGCAAGGAGGGGAA
GAGATGGTTTATCCGCACTCCAGATCGCTTGTGGTGGCGATGGACCAGTC
AAGGAGAGGGAGAAGAGTAGTCGTAGTGACACTTCCTCCTTCCCTTCGTC
CTCTCATCCCTCGTCCTCGGTATCTGTCCCGGCCACAAGGGAAGTGATTC
GCTCTCTGTTGCAGGCAGGCGCTGCTCCCAATGCCACCGCTCTCCCTCTT
TCTACCTCCTTCCAGAACGCTGGTGGTGGCAGCAGCAGGAGCAGCAGCAG
CAGCAGTGGTGCTGCCGCGACCGTCCGTCCCTTGGAATATCTTCTCACCT
CCCGTTTCTTCGAGGGAGAGGAGGGCGGGAAAGAGGGGCGGGTGGAGGTG
CTGACGGAGGGCGTGGAGGACGACTGTGCTCGGCGTCTGCTACTGGCAAG
ACTGCCGTTGGTGGTTGAGGTGGTGCGGTATGGAGGGAGGATGAGTATAA
AGAAGCTCAAGAGTGTGGGGGTAGATCCTGCTCTGATTGCGGTTATCGAG
TCGGCAAGGAGGGAGTGGGAGGGGAAAGCGGTGCCGGGAGTGGAGGTGAA
GTACAGAGGGCACATTGCAGGGAAGGAGAAGGGAGGGGAGGAGGGAGGGA
GGGATGTGGGGTGGACATTGACGTCATCGGTGGGATCGACAAGTGGCATT
TCTCGAGGAGGGATGGGGGTGGGGCACGCGCTGAATTCTCTGCTGGTCGG
AGGAGGCGGCGGCAGCAATGGCAGCAGCAACAGCATGGTCTGCCCATTAT
GTTCGACATATTTTACATTCCTCTTTCGAAGGCAATGCTGCCAGGCCTGT
GGCGTGGAAATCTGCACATACTGCTCCTCCAAAAGGCTCTCCGTCCTCCC
TCCTGCATCCTCTTCCTCTTTCTCCTCCCCTTCCTCCTCCACCCCTCCCG
TCCTCGAGAGAGCCTGTGACGTGTGCTTTACTCTCGCCCACACAAAAGCT
GCCACTCGCGCCGCGCTCCCTTCTTCTTCCCACTCTCACCCAAGCCCGAT
GGTTCTTCCTCCTCTTCCTTCCCAGCCATCGCCCGCTGATGAGTTTTATG
GCCGAAACAAGCGAGAACTCTGCTTGAATGGAAGGAGGGAAGCAAGGAGG
AAGGGAGGGAGGGAGGGAGGGGCGGCGGGGTCTACCCATCCTGAGACACG
ACCAGGGGTAGTGCCCACGGAGCAATCAAGCACACAGGTTACAGAAGCAG
CAGCACAAGCACAGAGCATGATGGACGAGAACATGATCCTGATGCAGgta
cgacgacattcatttcttttctttctcctccgtttctatcctcccaatat
tcccaccacgtacgcccgatttgaagtcgccgcagcattttaatcttcgc
ttgctcttccaaactcgtttttttctctttataaaggggcaaaaggcaag
ggcgtatggcagagaacagaagatgaggacacaaatcaacaagcttggtg
tctcacattccctcccccctccctccttcccttcctccttccttttctcc
acccctgccaagGAGCGTGGCGAGAAGCTTGATCGTATGACGTACAAAAC
GGAGCGCATGAAGAAGGGGGCCATGGATTTTGCCGAGGCAGCCAGGGCCC
TGGCAGAGAGGGAGAGGACCAAAAAGTGGTGGGAATTCTAA
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protein sequence of NO14G00530.1

>NO14G00530.1-protein ID=NO14G00530.1-protein|Name=NO14G00530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=742bp
MRSAETREGGKVIYAEEADKDADEEEEEEEQADDGREGRVMAFLAQRDEY
GWQPIHYAAACGSGRVLVHLLEKTGKGGRGRRRGGVDAMTEEGETPLHVA
ARFGQIGIVKLLLAKGASVMIRNDVGCTPLWATVNSLRGTGREGGGWGGR
GKGMGGKAERIVLLLLEAATNTSMALTQLNTPTATVPSAAAADDDDAAAV
GDSGDGGVEEGMGSSPLHVAVSFAVAVEREVLARRVRLLEEEGIDVRKKE
IEWEEEEKWMRKEAEGMVRLLLERGADVQARRGRDGLSALQIACGGDGPV
KEREKSSRSDTSSFPSSSHPSSSVSVPATREVIRSLLQAGAAPNATALPL
STSFQNAGGGSSRSSSSSSGAAATVRPLEYLLTSRFFEGEEGGKEGRVEV
LTEGVEDDCARRLLLARLPLVVEVVRYGGRMSIKKLKSVGVDPALIAVIE
SARREWEGKAVPGVEVKYRGHIAGKEKGGEEGGRDVGWTLTSSVGSTSGI
SRGGMGVGHALNSLLVGGGGGSNGSSNSMVCPLCSTYFTFLFRRQCCQAC
GVEICTYCSSKRLSVLPPASSSSFSSPSSSTPPVLERACDVCFTLAHTKA
ATRAALPSSSHSHPSPMVLPPLPSQPSPADEFYGRNKRELCLNGRREARR
KGGREGGAAGSTHPETRPGVVPTEQSSTQVTEAAAQAQSMMDENMILMQE
RGEKLDRMTYKTERMKKGAMDFAEAARALAERERTKKWWEF*
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Synonyms
Publications