NO14G00520, NO14G00520 (gene) Nannochloropsis oceanica

Overview
NameNO14G00520
Unique NameNO14G00520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3030
Alignment locationchr14:207361..210390 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:207361..210390 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
Homology
The following BLAST results are available for this feature:
BLAST of NO14G00520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002249NSK002249Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00520.1NO14G00520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00520.1NO14G00520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00520 ID=NO14G00520|Name=NO14G00520|organism=Nannochloropsis oceanica|type=gene|length=3030bp
ACAGTTCCTATTCTGGTCGGCTCTCCCGCATCCTCACGGCTCTGGCACTT
GGGGCAGCACGTCGAGGCCCATGGAAGACATCGACCTGGTTGCAGGACGG
GGAGAGAGCAAGCATCCCTCCCCCAAAAGCAGCAGCATAGACAATGgtaa
ggagatgatcgatgcactacccttctttcacctttgactcgtcggcaaca
cacatgttgctatatgtacacatacctgtacattatatgcgtgttgtaag
acggcgtggttccccaagtatgtgctgcttgactcaatcctcagagctct
ccctccctccatcatttctcttggtcaagagattggacatacactttgag
tctcttccacgcatgaacacgaaaattacgtattaattactcatgtttct
tctacctctttcttttttccctttcatgctttctaactacctccctccct
cctgtccataaaacagACTACAGCCCCCTCGGTCTTCATGCCCTAGACGA
AGAGGACTCCTCTATCATCTCCGAGCCCGAAAGCGATAGCAGCCCAGCCC
CTCCCATCACGAGAACCCCCCTTGGTCTTCATGCCCTAGACGAAGAGGAC
TCCTCTATCATCTCCAGCCCCGAAAGCGATAGCAGCCCAGCCCCTCCCAT
CACGAGAACCCCCCTCGGTCTTCATGCCCTAGACGAAGAGGACTCCTCTA
TCATCTCCAGCCCCGAAAGCGATAGCAGCCCAGCCCCTCCCATCACGAGA
ACCCCCCTTGGTCTTCATGCCCTAGACGAAGAGGACTCCTCTATCATCTC
CAGCCCCGAAAGCGATAGCAGCCCAGCCCCTCCCATCACGAGAACCCCCC
TCGGTCTTCATGCCCTAGACGAAGAGGACTCCTCTATCATCTCCGAGCCC
GAAAGCGATAGCAGCCCAGCCCCTCCCATCACGAGAACCCCCCTCGGTCT
TCATGCCCTAGACCAAGAAAAATGCTCTCTTCATGATACCTCCAAGCCCG
AAAGCGAAAGCAGCCCAGCCCCTCCCAACATGGAAAAACCCCTTGGCCTG
CATGCCCCGGGCCGAGAAAACAGCCTTCTTCAGAATACCTCCAAGCCCGA
AAGCGATAGCAGCCCAGCCCCTCCCAACATGGAAAAACCCCTTGGCCTGC
ATACCCCGGGCCGAGAAAACAGCCTTCTTCAGAATACCTCCAAGCCCGAA
AGCGATAGCAGCCCAGCCCCTCCCAACATGGAAAAACCCCTTGGCCTGCA
TACCCCGGGCCGAGAAAACAGCCTTCTTCAGAATACCTCCAAGCCCGAAA
GCAACAATAGGCAAGCCTTCCCCACGGTTACCCGCAGAGCCAACGTCAAA
GTCAGCATGCATCCCACCCTTAATCTACGCCTTGGCGCGACCGCCTCTAA
GGCCCTGAGTAGCATATCACGAGGACTATCGATTGCATCCCCCTTGCGAC
AGCCGCCAAAGCAGCACCAGCACCAGCATAACGAGCAAGATCAGCCACAG
CAGCAGTCACAGCAGCAGCCACAGCAGCAGCAGGAAGAGCAGTCACAGCA
GCAGCAGCCACAGCAGCAGTCACAGCAGCAGCCACAGCAGCAGCAGGAGG
AGCAGTCACAGCAACAGTCACAGCAGCAGTCACAGCAGCAGGAGAAGGAG
CAGCAGGAGCGAGAAGCCGCAAAAACATCGGCAAGATCAGCGGCTGCAGG
GTCTTCCGCGATCAATTTTTTTGCTTCATCTTCCCTCCCAAAACCGTCAT
CTGCTGCCACGGGAAGGCCAAGGGCAGGAACAGGAGGAGGAGGCGCGCCC
TCCTTGTCCAGCCTTCCCTCCCGCCGCCTTCCCAGCATTAACGGTGGCAG
TACTATTTCTGCACCTTCAACGTCCTTGGGCAGCAGTAGCAAGAATCCGA
TTGCTGCCCTCAACAGCATCAGGGATATCGGCGGCAGCACCAGCAGTGGC
AACAACCCCATTAGCAGCCACATGAACCCGACCACTGCCCTCAACAGCAG
CAGCATCAGGGATATCGGCAGCAGCACCAGCAGTGACAGCAACCCCATTA
GCAGCCACATGAACCCGACCACTGCCCTCATCAACAGCAGCATCAGGGAT
ATCGGCAGCAGCACCAGCAGTGGCAACAACCCCATCAGCAGTCACATGAA
CCCGACCACTGCCCTCATCAACAGCAGCAGCATCAGGGATATCGGCAGCA
ACAGCACCAACAGCACCAACAGTGGCAGCAACCCCATCAGCCGTCACATG
AACCCGACCACTGCCCTCATCAACAGCAGCGGCATCAGGGATATCGGCAG
CAACAGCACCAGCAGCAATGGTAATACTCACATCGACAGCAACGGTCAAG
CTGCCCCCAATAACGCCCACCAGGTGGTCGACAATGCAGCCCTCGACCGC
TCGCACTCCCTCCGTGCCTCACACGTGCTCCGTAGGCCATGCCCATTCCT
CCCTCGCCCCCCTCCAAACGAGCGCGAAAAGCGCATCATGCACCGCTTGG
CTTCCAGGATTGTCTTCTTGGGAGAAGACGAGGGAGGTTCGGGTTCCTTT
TCCTTGTTGGGTGATCCGAGCAGGATGCTGGTTAAGGAGGGGATGGTGCT
GAAAAAGGGAACTGTGGCGATGATCAAGAGGGACAAAAGGCGGCATTTAC
TGTTGTTTTCTGACTGTCTGTTAGTGACTGAACCGTTTTTGGACGATGGG
AATGACGGGAGGGGAGTAGAAAGGATCACGGTGAGGCAGATTATTGACCT
GAGGAAAGTGAAGTGGGTAAAGGGCTGTGAGGGGGAGGGAGGGAGGGAAG
GAGGGACGACTTGGGAGGTGGAGGGGAGGGATAGGTGTTGGAGGTTTGTA
TGTGAGGGTGAGGAGAGGGGAATGATGGAACAGGAGGGTTGGCTAAGGAG
GATGAGAGATGTGTTGTGCAGGCTGGCAGTGAGGCAAGGGGGGGGGGAGG
GAGGGAGGCAGGATGGACACACCGGCTGGTTCGTGGAACGGTTTTTTCTG
CGGCCGTTGAGGATGATTTATTTTTATTAA
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protein sequence of NO14G00520.1

>NO14G00520.1-protein ID=NO14G00520.1-protein|Name=NO14G00520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=880bp
MEDIDLVAGRGESKHPSPKSSSIDNDYSPLGLHALDEEDSSIISEPESDS
SPAPPITRTPLGLHALDEEDSSIISSPESDSSPAPPITRTPLGLHALDEE
DSSIISSPESDSSPAPPITRTPLGLHALDEEDSSIISSPESDSSPAPPIT
RTPLGLHALDEEDSSIISEPESDSSPAPPITRTPLGLHALDQEKCSLHDT
SKPESESSPAPPNMEKPLGLHAPGRENSLLQNTSKPESDSSPAPPNMEKP
LGLHTPGRENSLLQNTSKPESDSSPAPPNMEKPLGLHTPGRENSLLQNTS
KPESNNRQAFPTVTRRANVKVSMHPTLNLRLGATASKALSSISRGLSIAS
PLRQPPKQHQHQHNEQDQPQQQSQQQPQQQQEEQSQQQQPQQQSQQQPQQ
QQEEQSQQQSQQQSQQQEKEQQEREAAKTSARSAAAGSSAINFFASSSLP
KPSSAATGRPRAGTGGGGAPSLSSLPSRRLPSINGGSTISAPSTSLGSSS
KNPIAALNSIRDIGGSTSSGNNPISSHMNPTTALNSSSIRDIGSSTSSDS
NPISSHMNPTTALINSSIRDIGSSTSSGNNPISSHMNPTTALINSSSIRD
IGSNSTNSTNSGSNPISRHMNPTTALINSSGIRDIGSNSTSSNGNTHIDS
NGQAAPNNAHQVVDNAALDRSHSLRASHVLRRPCPFLPRPPPNEREKRIM
HRLASRIVFLGEDEGGSGSFSLLGDPSRMLVKEGMVLKKGTVAMIKRDKR
RHLLLFSDCLLVTEPFLDDGNDGRGVERITVRQIIDLRKVKWVKGCEGEG
GREGGTTWEVEGRDRCWRFVCEGEERGMMEQEGWLRRMRDVLCRLAVRQG
GGEGGRQDGHTGWFVERFFLRPLRMIYFY*
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Synonyms
Publications