NO14G00470, NO14G00470 (gene) Nannochloropsis oceanica

Overview
NameNO14G00470
Unique NameNO14G00470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1514
Alignment locationchr14:184381..185894 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:184381..185894 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007017microtubule-based process
Vocabulary: Cellular Component
TermDefinition
GO:0030286dynein complex
Vocabulary: INTERPRO
TermDefinition
IPR037177DLC_sf
Homology
The following BLAST results are available for this feature:
BLAST of NO14G00470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00470.1NO14G00470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589736gene_5613Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00470.1NO14G00470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00470 ID=NO14G00470|Name=NO14G00470|organism=Nannochloropsis oceanica|type=gene|length=1514bp
ACAGGCCCTAGCGTCATGGCACCGGTTTCCGGGGCATCGTCGTCTCACAC
TCTTTCCTGGCGGCTAATCCGAGGCACACCGGGCCCTTTATCCACgtaag
ccatccccttcccatccaccaccccgttcatccatctcaaccgtcagcca
cctccacccgctctataacatcaccttcccagGCAAATTTATGTCCAACT
TAATGCCCTATGGGCTACCCACAAGGGTAAGCTGCGAGACAAAGAAGAAA
CTGCCCTGGCGCTTAAGCAACACCTCGACACAAACACCTCCAGCCCCTGG
CACGTGGTTGTAGGGCCCGAAGACTTTGTCACCAACATCCGTTACCGCTC
CCGTCCTTCCCCTGAGCGCTGCTTCCTCCTGGCCAACCCCCACCACAAGC
TACGGGCTCTCATCTTTCAATCCTCCCCATGCCCTCCCCCACCCCCTCCC
TCCCTCAACGTCTCGCTCCCGGCCTCTCTACCGGAGCCCCTGCCACTGAC
TAGCGTCTACTCAACCGATCTTCCCACTGATCTTCCCACCGACGATGATT
CCATCTCCCCTCCCTCCTTCCGTCCCTCCCTCCCCCTCCTTCTCTCCCTG
GCCACCCTCGCCCTTCACACCGGTAAGGGTGAGCCCGTCGCAAGCAGCAT
CGCGCTTAAAGACTACCTGACCTGCCACCCTTCTTGTGGGGGTCCGCTCT
GGCACGTCATCATCGCCAGAGACAACGTCGAAATGGGGCTGGCGATCGAG
GCCCGCCCTTCCATGTCCTTCCTCGATGCCCGTGTGCAAGGGGGAGCAAA
AGTCCTGCGCGTCGTGACGTGGAAGCACGACCTCTCTCTCTCGATGTGGG
AAGAAGCTGGTTTGGCCCTCCCCTTCCCTTCGTTTAGCCAGGAAAAAACT
GCTCAGTGGGTGTTTGTCGTACTGATGCTCCTGGCCTTGGTCCTGGCGCT
GCTGACTCAGGCAAAGGCATGGACCGGTCTAGACGTACTTAAATGCCCGA
CGTGTGAGAGGGAGGGGTGTATGATGAACGCGGAGGAGGAAGAGGAAGCG
AGGGCGTGTGGGCTGCTGAAGGGTCGTATTAGAAATGCGGCTTTGGCGTG
TTTGACGGCGGCGTTGGTGAGCAAGGCTTGGGCGCGACGGACGAGAGGGA
TCGAGAGGCTGGAGAGGACAAGTGGGGGAGGAAGAGGGCGGGGTGGAGGG
AGGGGTGCCTCCTCCTCTTCGTCCACCTTGTCGTCTGGTGGAGGAGGAAG
AGGTAGTGGTGGTAGGAGAAGACCAGTTGCCAAATCGAGGAACAAATGAA
GAGGCGTGTGGAAGGTCAGAAGGGGTTTAGGTGTCCAAAGGCGCGGGTAA
GAAAGCCAGAAGGAGCTGGTAGCTGTAACGGTAGCGGTAACGTCACAACG
GAAACAGAGAACAGAAAAAGAAAACAAAGTGGAAAACTGACAAATCCATG
GAGAAGGCATGCACTTGATTTGTGGGTATGGGAGGAAGGAGACAAAGCAA
TGAAGTGGTGCGGT
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protein sequence of NO14G00470.1

>NO14G00470.1-protein ID=NO14G00470.1-protein|Name=NO14G00470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=399bp
MAPVSGASSSHTLSWRLIRGTPGPLSTQIYVQLNALWATHKGKLRDKEET
ALALKQHLDTNTSSPWHVVVGPEDFVTNIRYRSRPSPERCFLLANPHHKL
RALIFQSSPCPPPPPPSLNVSLPASLPEPLPLTSVYSTDLPTDLPTDDDS
ISPPSFRPSLPLLLSLATLALHTGKGEPVASSIALKDYLTCHPSCGGPLW
HVIIARDNVEMGLAIEARPSMSFLDARVQGGAKVLRVVTWKHDLSLSMWE
EAGLALPFPSFSQEKTAQWVFVVLMLLALVLALLTQAKAWTGLDVLKCPT
CEREGCMMNAEEEEEARACGLLKGRIRNAALACLTAALVSKAWARRTRGI
ERLERTSGGGRGRGGGRGASSSSSTLSSGGGGRGSGGRRRPVAKSRNK*
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Synonyms
Publications