NO14G00450, NO14G00450 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO14G00450
Unique Name	NO14G00450
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	5097
Alignment location	chr14:177397..182493 +

Link to JBrowse

Properties


Property Name	Value
Description	Alkylated DNA repair protein alkB 8, S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr14	genome	chr14:177397..182493 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0016300	tRNA (uracil) methyltransferase activity
GO:0008168	methyltransferase activity
GO:0016491	oxidoreductase activity
GO:0016300	tRNA (uracil) methyltransferase activity
GO:0008168	methyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0002098	tRNA wobble uridine modification
GO:0008152	metabolic process
GO:0055114	oxidation-reduction process
GO:0032259	methylation
GO:0030488	tRNA methylation
GO:0002098	tRNA wobble uridine modification

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR029063	SAM-dependent_MTases
IPR000504	RRM_dom
IPR032873	Trm9
IPR013216	Methyltransf_11
IPR027450	AlkB-like

Homology

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BLAST of NO14G00450 vs. NCBI_GenBank
Match: XP_005149789.1 (PREDICTED: alkylated DNA repair protein alkB homolog 8 [Melopsittacus undulatus])

HSP 1 Score: 220.3 bits (560), Expect = 1.900e-53
Identity = 144/483 (29.81%), Postives = 211/483 (43.69%), Query Frame = 0

Query:  236 WIEGKEGMT-------RRVQHYGYGFDYTTRDVVFHPRPAPLPFLHPSF-KPVLKRLLDGGLFRVPPNQMTLNEYMPGQGINGHVEAHHAFRDGVVSLSLGAPTILELRNAQTGAKKALFLPPRTALALWGEARYVWTHGIPDRRWDKVRG----------------VRLPREKRRVSYTMRRIIPPLPLPSLPPSLPPCGMMGHDDEKRRRPCLCPYPDVCSSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEVSLRPTAIEKEHVHSVYETIAPHWNHTRAIRRVHWPRVVRFLQSLPPYALIADVGCGDGKYMQLKRFDIHPSAYPLGCDRSLRLLHCTQGGGEGGRAGGEDAKPVEEKVAVEEKVEVFACDVLKVPFRDNAFDAALCIAVLHHLSTEAHRIQALRELLRIVRVGGVIDVHVWAMEQE 695
            WI G++          RRV+H+GY F Y   +V    +  PLP   P    P L++ L  G  +  P+Q+T+N+Y PGQGI  H++ H AF D ++SLSLGA  +++ ++   G   A+ LP  + L + GE+RY+WTHGI  R++D ++                 + L R + R S+T R++                         RR PC C YP VC S +                                                                                  ++ + +E+E+VH VYE IA H++ T   R   WPR+V FL+SLP  +++ADVGCG+GKY+      I+   Y +GCDRS  L+                       +  E+ +E F CD L VP R  + DA + IAV+HH ST   R+  +REL R++R GG   ++VWAMEQE
Sbjct:  160 WIGGEDTQNAQKTLKHRRVKHFGYEFRYDNNNV---DKDKPLPGGLPEICDPFLEKCLKQGYIKHKPDQLTVNQYEPGQGIPPHIDTHSAFEDEIISLSLGAEIVMDFKHPD-GRTVAIMLPRCSLLVMAGESRYLWTHGITPRKYDVIQASELGQKVGTITANAGDLTLNRRETRTSFTFRKV-------------------------RRSPCNCIYPSVCDSQKGPQSRVQPSFPHN--------------------------------------------------------------------EMQASKLEQEYVHKVYEEIATHFSST---RHSPWPRIVEFLRSLPKGSIVADVGCGNGKYL-----GINEDLYMVGCDRSKNLV----------------------DICGEKNLEAFVCDALSVPMRSGSCDACISIAVIHHFSTVERRLATIRELARLLRPGGTALIYVWAMEQE 515

[Close]

BLAST of NO14G00450 vs. NCBI_GenBank
Match: XP_021236191.1 (alkylated DNA repair protein alkB homolog 8 isoform X2 [Numida meleagris])

HSP 1 Score: 220.3 bits (560), Expect = 1.900e-53
Identity = 143/467 (30.62%), Postives = 206/467 (44.11%), Query Frame = 0

Query:  245 RRVQHYGYGFDYTTRDVVFHPRPAPLPFLHPSF-KPVLKRLLDGGLFRVPPNQMTLNEYMPGQGINGHVEAHHAFRDGVVSLSLGAPTILELRNAQTGAKKALFLPPRTALALWGEARYVWTHGIPDRRWD----------------KVRGVRLPREKRRVSYTMRRIIPPLPLPSLPPSLPPCGMMGHDDEKRRRPCLCPYPDVCSSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEVSLRPTAIEKEHVHSVYETIAPHWNHTRAIRRVHWPRVVRFLQSLPPYALIADVGCGDGKYMQLKRFDIHPSAYPLGCDRSLRLLHCTQGGGEGGRAGGEDAKPVEEKVAVEEKVEVFACDVLKVPFRDNAFDAALCIAVLHHLSTEAHRIQALRELLRIVRVGGVIDVHVWAMEQE 695
            RRV+H+GY F Y   DV    +  PLP   P    P L++ L  G  +  P+Q+T+N+Y PGQGI  H++ H AF D ++SLSLG+  +++ ++   G   A+ LP R+ L + GE+RY+WTHGI  R++D                 VR + L R + R S+T R++                         RR  C C YP VC S +                                                                                  +  + +E+E+VH VYE IA H++ T   R   WPRVV FL+SLP  +++ADVGCG+GKY+ + R     + Y +GCDRS  L+                       +  E+  + F CD L VP R  + DA + IAV+HH ST   R+ A+REL R+++ GG   ++VWAMEQE
Sbjct:  198 RRVKHFGYEFRYDNNDV---DKDKPLPGGLPEICIPFLEKCLKQGYIKHRPDQLTVNQYEPGQGIPPHIDTHSAFEDEIISLSLGSEIVMDFKHPD-GHTVAVMLPRRSLLVMTGESRYLWTHGITPRKYDVIQASELGQKVGTITADVRDLTLKRRETRTSFTFRKV-------------------------RRSSCNCIYPTVCDSQK--------------------------------------------------------------------EQRKQVEPSFPHSEMEASELEQEYVHKVYEEIATHFSST---RHSPWPRVVEFLRSLPEGSIVADVGCGNGKYLGINR-----NLYMIGCDRSKNLV----------------------DICGEKNSQAFVCDALSVPIRSGSCDACISIAVIHHFSTAERRLAAIRELARLLKPGGTALIYVWAMEQE 537

[Close]

BLAST of NO14G00450 vs. NCBI_GenBank
Match: XP_021236173.1 (alkylated DNA repair protein alkB homolog 8 isoform X1 [Numida meleagris] >XP_021236182.1 alkylated DNA repair protein alkB homolog 8 isoform X1 [Numida meleagris])

HSP 1 Score: 220.3 bits (560), Expect = 1.900e-53
Identity = 143/467 (30.62%), Postives = 206/467 (44.11%), Query Frame = 0

Query:  245 RRVQHYGYGFDYTTRDVVFHPRPAPLPFLHPSF-KPVLKRLLDGGLFRVPPNQMTLNEYMPGQGINGHVEAHHAFRDGVVSLSLGAPTILELRNAQTGAKKALFLPPRTALALWGEARYVWTHGIPDRRWD----------------KVRGVRLPREKRRVSYTMRRIIPPLPLPSLPPSLPPCGMMGHDDEKRRRPCLCPYPDVCSSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEVSLRPTAIEKEHVHSVYETIAPHWNHTRAIRRVHWPRVVRFLQSLPPYALIADVGCGDGKYMQLKRFDIHPSAYPLGCDRSLRLLHCTQGGGEGGRAGGEDAKPVEEKVAVEEKVEVFACDVLKVPFRDNAFDAALCIAVLHHLSTEAHRIQALRELLRIVRVGGVIDVHVWAMEQE 695
            RRV+H+GY F Y   DV    +  PLP   P    P L++ L  G  +  P+Q+T+N+Y PGQGI  H++ H AF D ++SLSLG+  +++ ++   G   A+ LP R+ L + GE+RY+WTHGI  R++D                 VR + L R + R S+T R++                         RR  C C YP VC S +                                                                                  +  + +E+E+VH VYE IA H++ T   R   WPRVV FL+SLP  +++ADVGCG+GKY+ + R     + Y +GCDRS  L+                       +  E+  + F CD L VP R  + DA + IAV+HH ST   R+ A+REL R+++ GG   ++VWAMEQE
Sbjct:  203 RRVKHFGYEFRYDNNDV---DKDKPLPGGLPEICIPFLEKCLKQGYIKHRPDQLTVNQYEPGQGIPPHIDTHSAFEDEIISLSLGSEIVMDFKHPD-GHTVAVMLPRRSLLVMTGESRYLWTHGITPRKYDVIQASELGQKVGTITADVRDLTLKRRETRTSFTFRKV-------------------------RRSSCNCIYPTVCDSQK--------------------------------------------------------------------EQRKQVEPSFPHSEMEASELEQEYVHKVYEEIATHFSST---RHSPWPRVVEFLRSLPEGSIVADVGCGNGKYLGINR-----NLYMIGCDRSKNLV----------------------DICGEKNSQAFVCDALSVPIRSGSCDACISIAVIHHFSTAERRLAAIRELARLLKPGGTALIYVWAMEQE 542

[Close]

BLAST of NO14G00450 vs. NCBI_GenBank
Match: XP_001625438.1 (predicted protein [Nematostella vectensis] >EDO33338.1 predicted protein [Nematostella vectensis])

HSP 1 Score: 220.3 bits (560), Expect = 1.900e-53
Identity = 151/480 (31.46%), Postives = 204/480 (42.50%), Query Frame = 0

Query:  240 KEGMTRRVQHYGYGFDYTTRDVVFHPRPAPLPFLHPSF-KPVLKRLLDGGLFRVPPNQMTLNEYMPGQGINGHVEAHHAFRDGVVSLSLGAPTILELRNAQTGAKKALFLPPRTALALWGEARYVWTHGIPDRRWD------------------------KVRGVRLPREKRRVSYTMRRIIPPLPLPSLPPSLPPCGMMGHDDEKRRRPCLCPYPDVCSSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEVSLRPTAIEKEHVHSVYETIAPHWNHTRAIRRVHWPRVVRFLQSLPPYALIADVGCGDGKYMQLKRFDIHPSAYPLGCDRSLRLLHCTQGGGEGGRAGGEDAKPVEEKVAVEEKVEVFACDVLKVPFRDNAFDAALCIAVLHHLSTEAHRIQALRELLRIVRVGGVIDVHVWAMEQE 695
            KE   RRV+HYGY F Y T D+    R  PLP   P+    +L R++  G  +  P+Q+T+NEY+PGQGI  HV+ H AF DG+ SLSLGA   ++ R+  +    ++ LP R+ L + GE+RY+WTHGI  R++D                           GV     +RR+S T R+I+                           PC C Y   C+S                                                                                        ++EK HVH VYE IA H++ T   R   WPR+  FL+ LP  +L+ADVGCG+GKY+      I+   +  G DRS  L                        +A E    V  CD+L +P+R+NAFD  LCIAV+HHLST   RI ALREL+RI+R  G+  V+VWA+EQE
Sbjct:  168 KELRHRRVKHYGYEFLYGTNDI---DRAKPLPGGMPAVCNDILTRMVSQGAVQNTPDQLTVNEYLPGQGIPPHVDTHSAFEDGICSLSLGAKISMDFRHPDS-RHVSVLLPRRSLLVMSGESRYLWTHGITPRKFDIIGSGLDTSIHEDQESIAADASNVSTSGVTQYERERRISLTFRKIL-------------------------HVPCTCKYSSKCNSQ------------------------------------------------------------------GYKKAEDKNAASLPSTQGEAQSLEKRHVHEVYENIADHFSDT---RHSPWPRIAAFLRELPTGSLVADVGCGNGKYL-----GINGMVFKTGSDRSFNL----------------------ATIAYERGHSVIVCDILSLPYRNNAFDVCLCIAVIHHLSTTERRIAALRELVRIIRPAGLALVYVWALEQE 522

[Close]

BLAST of NO14G00450 vs. NCBI_GenBank
Match: XP_004605211.1 (PREDICTED: alkylated DNA repair protein alkB homolog 8 [Sorex araneus])

HSP 1 Score: 219.9 bits (559), Expect = 2.400e-53
Identity = 145/471 (30.79%), Postives = 207/471 (43.95%), Query Frame = 0

Query:  245 RRVQHYGYGFDYTTRDV-VFHPRPAPLPFLHPSFKPVLKRLLDGGLFRVPPNQMTLNEYMPGQGINGHVEAHHAFRDGVVSLSLGAPTILELRNAQTGAKKALFLPPRTALALWGEARYVWTHGIPDRRWDKVRG---------------VRLPREKRRVSYTMRRIIPPLPLPSLPPSLPPCGMMGHDDEKRRRPCLCPYPDVCSSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEVSLRPTAIEKEHVHSVYETIAPHWNHTRAIRRVHWPRVVRFLQSLPPYALIADVGCGDGKYMQLKRFDIHPSAYPLGCDRSLRLLHCTQGGGEGGRAGGEDAKPVEEKVAVEEKVEVFACDVLKVPFRDNAFDAALCIAVLHHLSTEAHRIQALRELLRIVRVGGVIDVHVWAMEQEDGSRR 700
            RRV+H+GY F Y   +V    P P  LP L  S   +L+  L  G     P+Q+T+N+Y PG GI  HV+ H AF D ++SLSLG+ T+++ ++   GA   + LP R+ L + GEARY+W HGI  R++D V+                + L +   R S+T R++                         RR PC C YP VC S                                                                                 E     + +E++HVH VYE IA H++ T   R   WPR+V FL++LP  +L+AD+GCG+GKY+ L     +   + +GCDRS RL+                       +  E + + F CD L VP R  + DA + IAV+HHL+T   R+ AL+EL+R++R GG   V VWAMEQE  S++
Sbjct:  174 RRVKHFGYEFHYENNNVNKDEPLPGGLPDLCES---ILEAWLKEGFITYKPDQLTVNQYEPGHGIPPHVDTHSAFEDEIISLSLGSETVMDFKHPD-GATAPVMLPRRSLLVMRGEARYLWAHGITPRKFDTVQASLGRTGGIIQSDAGDLTLRKRGVRTSFTFRKV-------------------------RRTPCDCKYPQVCDSQ-----------------------------------------------------------------------MADTAPSFPESDKEASQLERDHVHRVYEEIAGHFSST---RHTPWPRIVEFLKALPAGSLVADIGCGNGKYLGL-----NTELFMIGCDRSHRLV----------------------DICRERQFQAFVCDALAVPIRSGSCDACISIAVIHHLATAERRLAALQELVRLLRPGGTALVSVWAMEQEHDSKK 514

[Close]

BLAST of NO14G00450 vs. NCBI_GenBank
Match: XP_009682103.1 (PREDICTED: alkylated DNA repair protein alkB homolog 8 isoform X3 [Struthio camelus australis])

HSP 1 Score: 219.5 bits (558), Expect = 3.200e-53
Identity = 142/467 (30.41%), Postives = 206/467 (44.11%), Query Frame = 0

Query:  245 RRVQHYGYGFDYTTRDVVFH-PRPAPLPFLHPSFKPVLKRLLDGGLFRVPPNQMTLNEYMPGQGINGHVEAHHAFRDGVVSLSLGAPTILELRNAQTGAKKALFLPPRTALALWGEARYVWTHGIPDRRWDKVRG----------------VRLPREKRRVSYTMRRIIPPLPLPSLPPSLPPCGMMGHDDEKRRRPCLCPYPDVCSSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEVSLRPTAIEKEHVHSVYETIAPHWNHTRAIRRVHWPRVVRFLQSLPPYALIADVGCGDGKYMQLKRFDIHPSAYPLGCDRSLRLLHCTQGGGEGGRAGGEDAKPVEEKVAVEEKVEVFACDVLKVPFRDNAFDAALCIAVLHHLSTEAHRIQALRELLRIVRVGGVIDVHVWAMEQE 695
            RRV+H+GY F Y + +V    P P  LP +   F   L+  L  G  R  P+Q+T+N+Y PGQGI  H++ H AF D ++SLSLGA  +++ ++   G   A+ LP R+ L + GE+RY+WTHGI  R++D ++                 + L R + R S+T R++                         RR PC C YP VC S +                                                                                  +  + +E+E+VH VYE IA H++ T   R   WP++V FL+SLP  A++ADVGCG+GKY+      I+   Y +GCDRS  L+                       +  E++ + F CD L VP R  + DA + IAV+HH ST   R+  +REL R++R GG   ++VWAMEQE
Sbjct:  162 RRVKHFGYEFCYDSNNVEKEKPLPGGLPEICNLF---LENCLKQGYIRHKPDQLTVNQYEPGQGIPPHIDTHSAFEDEIISLSLGAQIVMDFKHPD-GRTVAIMLPRRSLLVMTGESRYLWTHGITPRKYDVIQASELGQKVGTITADVGDLTLNRRETRTSFTFRKV-------------------------RRSPCNCIYPSVCDSQKGQQRQGQPSFPLS--------------------------------------------------------------------EMEASKLEQEYVHKVYEEIAAHFSST---RHSPWPQIVEFLRSLPKGAIVADVGCGNGKYL-----GINKDLYMIGCDRSKNLV----------------------DICGEKEFQAFVCDALSVPIRSGSCDACISIAVIHHFSTAERRLATIRELARLLRPGGTALIYVWAMEQE 501

[Close]

BLAST of NO14G00450 vs. NCBI_GenBank
Match: XP_417166.3 (PREDICTED: alkylated DNA repair protein alkB homolog 8 isoform X3 [Gallus gallus])

HSP 1 Score: 219.2 bits (557), Expect = 4.100e-53
Identity = 142/467 (30.41%), Postives = 206/467 (44.11%), Query Frame = 0

Query:  245 RRVQHYGYGFDYTTRDV-VFHPRPAPLPFLHPSFKPVLKRLLDGGLFRVPPNQMTLNEYMPGQGINGHVEAHHAFRDGVVSLSLGAPTILELRNAQTGAKKALFLPPRTALALWGEARYVWTHGIPDRRWD----------------KVRGVRLPREKRRVSYTMRRIIPPLPLPSLPPSLPPCGMMGHDDEKRRRPCLCPYPDVCSSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEVSLRPTAIEKEHVHSVYETIAPHWNHTRAIRRVHWPRVVRFLQSLPPYALIADVGCGDGKYMQLKRFDIHPSAYPLGCDRSLRLLHCTQGGGEGGRAGGEDAKPVEEKVAVEEKVEVFACDVLKVPFRDNAFDAALCIAVLHHLSTEAHRIQALRELLRIVRVGGVIDVHVWAMEQE 695
            RRV+H+GY F Y   DV   +P P  LP +     P L++ L  G  +  P+Q+T+N+Y PGQGI  H++ H AF D ++SLSLG+  +++ ++   G   A+ LP R+ L + GE+RY+WTHGI  R++D                 VR + L R + R S+T R++                         RR  C C YP VC S +                                                                                  +  + +E+++VH VYE IA H++ T   R   WPRVV FL+SLP  +++ADVGCG+GKY+ + R       Y +GCDRS  L+                       +  E+  + F CD L VP R  + DA + IAV+HH ST   R+ A+REL R+++ GG   ++VWAMEQE
Sbjct:  198 RRVKHFGYEFRYDNNDVDKDNPLPGGLPEI---CIPFLEKCLKQGYIKHKPDQLTVNQYEPGQGIPPHIDTHSAFEDEIISLSLGSEIVMDFKHPD-GHTVAVMLPRRSLLVMTGESRYLWTHGITPRKYDVIQASELGQKVGTITADVRDLTLKRRETRTSFTFRKV-------------------------RRSSCNCIYPSVCDSQKGQQRQAEPSFPHN--------------------------------------------------------------------EMEASELEQQYVHKVYEEIATHFSST---RHSPWPRVVEFLRSLPEGSIVADVGCGNGKYLGINR-----DLYMVGCDRSKNLV----------------------DICGEKDCQAFVCDALSVPIRSGSCDACISIAVIHHFSTAERRLAAIRELARLLKPGGTALIYVWAMEQE 537

[Close]

BLAST of NO14G00450 vs. NCBI_GenBank
Match: XP_004938883.1 (PREDICTED: alkylated DNA repair protein alkB homolog 8 isoform X1 [Gallus gallus])

HSP 1 Score: 219.2 bits (557), Expect = 4.100e-53
Identity = 142/467 (30.41%), Postives = 206/467 (44.11%), Query Frame = 0

Query:  245 RRVQHYGYGFDYTTRDV-VFHPRPAPLPFLHPSFKPVLKRLLDGGLFRVPPNQMTLNEYMPGQGINGHVEAHHAFRDGVVSLSLGAPTILELRNAQTGAKKALFLPPRTALALWGEARYVWTHGIPDRRWD----------------KVRGVRLPREKRRVSYTMRRIIPPLPLPSLPPSLPPCGMMGHDDEKRRRPCLCPYPDVCSSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEVSLRPTAIEKEHVHSVYETIAPHWNHTRAIRRVHWPRVVRFLQSLPPYALIADVGCGDGKYMQLKRFDIHPSAYPLGCDRSLRLLHCTQGGGEGGRAGGEDAKPVEEKVAVEEKVEVFACDVLKVPFRDNAFDAALCIAVLHHLSTEAHRIQALRELLRIVRVGGVIDVHVWAMEQE 695
            RRV+H+GY F Y   DV   +P P  LP +     P L++ L  G  +  P+Q+T+N+Y PGQGI  H++ H AF D ++SLSLG+  +++ ++   G   A+ LP R+ L + GE+RY+WTHGI  R++D                 VR + L R + R S+T R++                         RR  C C YP VC S +                                                                                  +  + +E+++VH VYE IA H++ T   R   WPRVV FL+SLP  +++ADVGCG+GKY+ + R       Y +GCDRS  L+                       +  E+  + F CD L VP R  + DA + IAV+HH ST   R+ A+REL R+++ GG   ++VWAMEQE
Sbjct:  250 RRVKHFGYEFRYDNNDVDKDNPLPGGLPEI---CIPFLEKCLKQGYIKHKPDQLTVNQYEPGQGIPPHIDTHSAFEDEIISLSLGSEIVMDFKHPD-GHTVAVMLPRRSLLVMTGESRYLWTHGITPRKYDVIQASELGQKVGTITADVRDLTLKRRETRTSFTFRKV-------------------------RRSSCNCIYPSVCDSQKGQQRQAEPSFPHN--------------------------------------------------------------------EMEASELEQQYVHKVYEEIATHFSST---RHSPWPRVVEFLRSLPEGSIVADVGCGNGKYLGINR-----DLYMVGCDRSKNLV----------------------DICGEKDCQAFVCDALSVPIRSGSCDACISIAVIHHFSTAERRLAAIRELARLLKPGGTALIYVWAMEQE 589

[Close]

BLAST of NO14G00450 vs. NCBI_GenBank
Match: XP_004938884.1 (PREDICTED: alkylated DNA repair protein alkB homolog 8 isoform X2 [Gallus gallus])

HSP 1 Score: 219.2 bits (557), Expect = 4.100e-53
Identity = 142/467 (30.41%), Postives = 206/467 (44.11%), Query Frame = 0

Query:  245 RRVQHYGYGFDYTTRDV-VFHPRPAPLPFLHPSFKPVLKRLLDGGLFRVPPNQMTLNEYMPGQGINGHVEAHHAFRDGVVSLSLGAPTILELRNAQTGAKKALFLPPRTALALWGEARYVWTHGIPDRRWD----------------KVRGVRLPREKRRVSYTMRRIIPPLPLPSLPPSLPPCGMMGHDDEKRRRPCLCPYPDVCSSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEVSLRPTAIEKEHVHSVYETIAPHWNHTRAIRRVHWPRVVRFLQSLPPYALIADVGCGDGKYMQLKRFDIHPSAYPLGCDRSLRLLHCTQGGGEGGRAGGEDAKPVEEKVAVEEKVEVFACDVLKVPFRDNAFDAALCIAVLHHLSTEAHRIQALRELLRIVRVGGVIDVHVWAMEQE 695
            RRV+H+GY F Y   DV   +P P  LP +     P L++ L  G  +  P+Q+T+N+Y PGQGI  H++ H AF D ++SLSLG+  +++ ++   G   A+ LP R+ L + GE+RY+WTHGI  R++D                 VR + L R + R S+T R++                         RR  C C YP VC S +                                                                                  +  + +E+++VH VYE IA H++ T   R   WPRVV FL+SLP  +++ADVGCG+GKY+ + R       Y +GCDRS  L+                       +  E+  + F CD L VP R  + DA + IAV+HH ST   R+ A+REL R+++ GG   ++VWAMEQE
Sbjct:  226 RRVKHFGYEFRYDNNDVDKDNPLPGGLPEI---CIPFLEKCLKQGYIKHKPDQLTVNQYEPGQGIPPHIDTHSAFEDEIISLSLGSEIVMDFKHPD-GHTVAVMLPRRSLLVMTGESRYLWTHGITPRKYDVIQASELGQKVGTITADVRDLTLKRRETRTSFTFRKV-------------------------RRSSCNCIYPSVCDSQKGQQRQAEPSFPHN--------------------------------------------------------------------EMEASELEQQYVHKVYEEIATHFSST---RHSPWPRVVEFLRSLPEGSIVADVGCGNGKYLGINR-----DLYMVGCDRSKNLV----------------------DICGEKDCQAFVCDALSVPIRSGSCDACISIAVIHHFSTAERRLAAIRELARLLKPGGTALIYVWAMEQE 565

[Close]

BLAST of NO14G00450 vs. NCBI_GenBank
Match: XP_004938885.1 (PREDICTED: alkylated DNA repair protein alkB homolog 8 isoform X4 [Gallus gallus])

HSP 1 Score: 219.2 bits (557), Expect = 4.100e-53
Identity = 142/467 (30.41%), Postives = 206/467 (44.11%), Query Frame = 0

Query:  245 RRVQHYGYGFDYTTRDV-VFHPRPAPLPFLHPSFKPVLKRLLDGGLFRVPPNQMTLNEYMPGQGINGHVEAHHAFRDGVVSLSLGAPTILELRNAQTGAKKALFLPPRTALALWGEARYVWTHGIPDRRWD----------------KVRGVRLPREKRRVSYTMRRIIPPLPLPSLPPSLPPCGMMGHDDEKRRRPCLCPYPDVCSSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEVSLRPTAIEKEHVHSVYETIAPHWNHTRAIRRVHWPRVVRFLQSLPPYALIADVGCGDGKYMQLKRFDIHPSAYPLGCDRSLRLLHCTQGGGEGGRAGGEDAKPVEEKVAVEEKVEVFACDVLKVPFRDNAFDAALCIAVLHHLSTEAHRIQALRELLRIVRVGGVIDVHVWAMEQE 695
            RRV+H+GY F Y   DV   +P P  LP +     P L++ L  G  +  P+Q+T+N+Y PGQGI  H++ H AF D ++SLSLG+  +++ ++   G   A+ LP R+ L + GE+RY+WTHGI  R++D                 VR + L R + R S+T R++                         RR  C C YP VC S +                                                                                  +  + +E+++VH VYE IA H++ T   R   WPRVV FL+SLP  +++ADVGCG+GKY+ + R       Y +GCDRS  L+                       +  E+  + F CD L VP R  + DA + IAV+HH ST   R+ A+REL R+++ GG   ++VWAMEQE
Sbjct:  197 RRVKHFGYEFRYDNNDVDKDNPLPGGLPEI---CIPFLEKCLKQGYIKHKPDQLTVNQYEPGQGIPPHIDTHSAFEDEIISLSLGSEIVMDFKHPD-GHTVAVMLPRRSLLVMTGESRYLWTHGITPRKYDVIQASELGQKVGTITADVRDLTLKRRETRTSFTFRKV-------------------------RRSSCNCIYPSVCDSQKGQQRQAEPSFPHN--------------------------------------------------------------------EMEASELEQQYVHKVYEEIATHFSST---RHSPWPRVVEFLRSLPEGSIVADVGCGNGKYLGINR-----DLYMVGCDRSKNLV----------------------DICGEKDCQAFVCDALSVPIRSGSCDACISIAVIHHFSTAERRLAAIRELARLLKPGGTALIYVWAMEQE 536

The following BLAST results are available for this feature:

BLAST of NO14G00450 vs. NCBI_GenBank

BLAST of NO14G00450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_005149789.1	1.900e-53	29.81	PREDICTED: alkylated DNA repair protein alkB homol...	[more]
XP_021236191.1	1.900e-53	30.62	alkylated DNA repair protein alkB homolog 8 isofor...	[more]
XP_021236173.1	1.900e-53	30.62	alkylated DNA repair protein alkB homolog 8 isofor...	[more]
XP_001625438.1	1.900e-53	31.46	predicted protein [Nematostella vectensis] >EDO333...	[more]
XP_004605211.1	2.400e-53	30.79	PREDICTED: alkylated DNA repair protein alkB homol...	[more]
XP_009682103.1	3.200e-53	30.41	PREDICTED: alkylated DNA repair protein alkB homol...	[more]
XP_417166.3	4.100e-53	30.41	PREDICTED: alkylated DNA repair protein alkB homol...	[more]
XP_004938883.1	4.100e-53	30.41	PREDICTED: alkylated DNA repair protein alkB homol...	[more]
XP_004938884.1	4.100e-53	30.41	PREDICTED: alkylated DNA repair protein alkB homol...	[more]
XP_004938885.1	4.100e-53	30.41	PREDICTED: alkylated DNA repair protein alkB homol...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL138	nonsL138	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR069	ncniR069	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR023	ngnoR023	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK002239	NSK002239	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO14G00450.1	NO14G00450.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide
NO14G00450.2	NO14G00450.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|639284	gene_5611	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100922g3	gene5731	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO14G00450.1	NO14G00450.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA
NO14G00450.2	NO14G00450.2	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence
protein sequence

gene sequence

>NO14G00450 ID=NO14G00450|Name=NO14G00450|organism=Nannochloropsis oceanica|type=gene|length=5097bp
GCACATACTAACATAGTGCTTATAAACATATAAAGATACAGAGCGCCCGC
AATTCTGCAGCTGACAAGACGCTTCCAATATGCCCCCAACGTCGGCCATG
CCTCGACCACTCTCGCGTACGCCTCCGCCGCTCGAGCCGCCACACGACCC
GCAACCCTTACAACCTGGACTCCATCCTGCTCCCTATGGCCAGGAAAATG
TGCCCACGCGCTTTTTGTACCTCTCAGGCATTGGAGATGCCCTCAAGACG
GACCTGCAGgttggttgcgtagaaggagggaaggtggggtgggggatgtg
ggaggttgtggataggtgtaagaactgcaggcataaataggtgggtcgaa
actaccaatcttttttgcttcttgatagcaatccagtggtgtctcaaagt
ttaggaagtgtggcaagtcaagggagattccattcgcccgtctccttccc
tccctcccaccctcccacagGAGCTTCGTGCCCTAATGGAGACCTACGGC
CCGCTCGACGACAGCGAGGGTCTGGCCATTGAAGCGCCTGCGAAAAGAGG
CTTTGTCCTCGTGCGTTACCTCGATAAGAACAGCGCCCAGAGGGCCAAGG
ACGCACTGGCAGGGGTGGGGGACAAGGAGGGGGAGAGGGAGGGAAGGGGA
CCGCCGTTGATAGGAGGGAGGAGAGTGCCGAAGGTGCAATATTCGGTGAT
GGTGACGGCAGATGAGGAGgtgagtgtgaggaagggaggaaaaaagctat
gggaaaaaggggagggaagaaatgcgcagtgcgatgcaacaatactgctg
gaggagagagtcttgacgctccttccctctctcacgctcctcctccttcc
ctccatccctccctccctccctccctccctctcgagCGCAACAAGGTACC
ACACCCCGAGCCATTGGATCCGTTTGAGCAAGCCTCCCTGGAGGTGGATA
TACCTGGGGTGATGCTCATTGAGgtagggagggagggagggagggaggga
gggagggagggagggagggagggagggagggagggagggagggagggagg
gagggagggagggagggagggagggagggagggagggagagagggaggga
gggagggagggagggagggagggagggaggtttcataggatgggggtacg
catgcttcttcgaccttaactccttcctccctcctttcaatccctctccc
tattgtccttattttcttttttgatgtcttagAATTTTCTAACCGAAGAG
GAGGAAGCGTCGTTGTTGGCCTTTGCTGATGAGGAGGTGGAAGGAGGGGG
AGGGGGACCAAAGACCACCACCACCACTAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGTACGACAAACATCTCTCTCAGCAGCAGCAATAGCAGCAGC
AGCAGCAATAGCAGCAGCAAGTGGATCGAGGGGAAGGAAGGAATGACACG
GCGGGTGCAGCATTATGGgtagggagggagggagggagggaaggagggag
ggaagatgaaagggcccacatcaaccaatgcctgcccttccatttctcaa
aaccttccctccctccctccctcccttcctcctcccagCTACGGTTTCGA
CTACACCACCCGCGACGTCGTCTTCCACCCCCGCCCTGCCCCCCTGCCCT
TCCTCCACCCCTCCTTCAAGCCCGTCCTCAAGCGGCTCCTCGACGGAGGC
CTCTTCCGGGTACCTCCCAATCAGATGACGCTTAACGAATACATGCCTGG
ACAAGGCATCAATGGACATGTGGAAGCACACCACGCCTTTAGGGATGGTG
TGGTTTCTCTCTCCTTGGgtagggagggagggagggagggagggaggggt
ggagtgtcttgccacgtgcccaatgttcttgcccttctttctcacctccc
atccactataccctccctccctccctccctccctccctccctccctccct
ccctccctccctccctccctcagGTGCCCCTACCATCCTTGAACTCCGAA
ATGCCCAGACAGgtacctcctccctccctccctccctccctccgtatctc
cctccgtatctccctcccttgcccttcacgcattccctcacccacccacc
ctccctccctccctccctccatccatccatccatccctcagGTGCTAAAA
AAGCCCTTTTTCTCCCTCCAAGAACCGCCCTTGCCTTGTGGGGGGAAGCG
CGTTACGTGTGGACCCACGGCATCCCTGACAGGCGGTGGGACAAGgtagg
gagggagggagggagggaaggagggaaggagggaagggggggggttaaaa
aatattctgtaaacgtcctcatcccgccgtccctccctccctccctccct
tcctgccttccttcctccctccttcctccctccctcccccccaccccctc
tccctctctccctccctcgtgcagGTTCGAGGCGTTCGCCTCCCCCGGGA
AAAGCGCCGGGTCTCCTACACCATGCGCCGTATCATCCCCCCCCTCCCCC
TCCCCTCCCTCCCTCCCTCCCTGCCTCCCTGCGGCATGATGGGCCATGAC
GACGAGAAACGACGTCGGCCGTGCCTGTGTCCATACCCGGATGTGTGCTC
CTCGTCAAGGGAGGAACGAAGAGCCTACTTAATCAGGATGAGGGAAGGGG
CGAGGGAGGGAGGGGAGAAAGAGAAGGAGGAAACAGTAGCAGCCACAGCA
AATGGAAAAATGACAACAAAAACAAGAAGAAGAGGAGAAGGAGGGGGAGG
AGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGAAGTAGGGGGAAGAGGAAGAGGAGGAGAGGAG
GTCTCATTGAGGCCCACAGCGATAGAGAAGGAGCACGTGCATTCGGTATA
gtgagtacagatgccttccctcccttcctccctctctccttccttccctc
cctcagtctctttctccttgcttccctccctccctccctccttgcttact
tcctctcctatcgatcaccgaccacccttccctgtccccacattcttctg
ccctccctccctccctccctccctccctccctccatccatcccagCGAGA
CGATCGCCCCTCACTGGAACCACACACGTGCCATCCGCCGAGTCCACTGG
CCGAGGGTCGTACGCTTCCTGCAGTCCCTGCCGCCCTATGCCTTGATAGg
taggtaggtaggtagggaagaagggagggaaggagggagggatggagggt
atgggatgcactgccttgagagttattgtccgccctatgcctcgattgga
acataaccctccctccctccctccctccctcccttcataccctccctccc
cctccctcctccctcctccctccctccctccctccccagCCGACGTCGGA
TGCGGGGACGGGAAGTACATGCAGCTAAAGCGGTTCGACATCCACCCTTC
CGCCTACCCCCTGGGGTGCGACCGCAGCCTGCGTCTCCTCCACTGCACGC
AAGGAGGGGGGGAGGGCGGGAGGGCGGGAGGGGAGGATGCGAAGCCGGTG
GAGGAGAAAGTAGCGGTGGAGGAGAAAGTAGAGGTGTTTGCGTGTGATGT
GCTGAAGgtgagggaaggagcaaggaagagagggaggcaggggggaggga
gggaacgagggaggtggaaggagatttagggttgagagagcgaggaaagg
gaagagaaggaagaggaaggagggagagagaaggagaagagaaggaagag
aaggagagaaggatttcatggagctaccaaatctccccttcatgcttctt
tccatacctacctacctacctatcatgcagGTGCCTTTCCGTGACAACGC
TTTTGACGCTGCTCTTTGCATTGCAGTCTTGCACCATCTGTCCACCGAGG
CCCACCGgtacgtcatgagcgaaggagggaaggaagaagggaaggaagaa
aggagggaagaagggagggaaagaaggaaggagggaagaaaggagggaag
gaaggaaggagggagagaagaaaagaaggaggtaaggatgcggtgtatgc
agaaacggacataattttcccctctgcattgtcatgccatagctgcactt
caatgctttttcctctctcccttcacaccaggatcaataataataataaa
tgcaataaaatgataataatgataataaaatatctcatgtactctccctt
tccaccagCATCCAAGCTTTGCGAGAACTCCTGCGTATCGTCCGCGTGGG
CGGCGTGATCGATGTACACGTATGGGCCATGGAACAAGAGGATGGTTCTC
GTCGCCGgtgagtctgcctccccccttgcccttcctcctctcctctctac
ttttcgccttcccctcttcgaggcttgcctccttcctccttcctcctccc
tcctccctttggaggttttgttccctctttctttcctttcttgttttctt
tgaagtctcaacctctttcttatgtcatgcatagTTTCGAGTCCCAAGAT
ACCCTCGTCCCCTGGAACATGCAAGCTAAATATGCGACTTCTGGTACCGC
CGCCGAGAGCAGCTGTGACAACAACAGCAACAACAACAACAACAACGGCA
GCAACAACAACGGTAGCAACGACGGTAACGATTGGGTTGACGAAGGGAAA
GATGACAAGGATCTCTCTTCCGCTGCCATCACTTCCATATCCTTTACTAC
TCCCTCGTCCTCTGCTTCCACTCCCAATACCTCTACCTCCTCTACCTCCT
CTTCCTCCTACGTCCACGCCTCCCCTCCCCCCCTCCCTCCCTCCGCCATC
CCCTCCAAAGTCAATACCTCCCTAAAACTGCTGACCTATGATCGTTATTG
TCACTTGTACATGGAATGGGAGATTGAGATGTTGCTCAATGAAGTAGGGC
ATGAATTCGAGTGTGAGGTCATCGACAGGGGGTATGACAAAGGGAATTGG
TATGTGACCATTCGAAAGCTGGGTGATGCATACCTGGATTTTTAATAATG
GAGGAGGCGGAAGGTGAGTGAAGACAAGAATCAAAGCAATGGAGTAGAAG
AAAGAACAATTATAAAACAAGGAGAGAAGGCCATAGTTGCTGAGGCA

protein sequence of NO14G00450.1

>NO14G00450.1-protein ID=NO14G00450.1-protein|Name=NO14G00450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=870bp
MPPTSAMPRPLSRTPPPLEPPHDPQPLQPGLHPAPYGQENVPTRFLYLSG
IGDALKTDLQELRALMETYGPLDDSEGLAIEAPAKRGFVLVRYLDKNSAQ
RAKDALAGVGDKEGEREGRGPPLIGGRRVPKVQYSVMVTADEERNKVPHP
EPLDPFEQASLEVDIPGVMLIENFLTEEEEASLLAFADEEVEGGGGGPKT
TTTTSSSSSSSSSSSTTNISLSSSNSSSSSNSSSKWIEGKEGMTRRVQHY
GYGFDYTTRDVVFHPRPAPLPFLHPSFKPVLKRLLDGGLFRVPPNQMTLN
EYMPGQGINGHVEAHHAFRDGVVSLSLGAPTILELRNAQTGAKKALFLPP
RTALALWGEARYVWTHGIPDRRWDKVRGVRLPREKRRVSYTMRRIIPPLP
LPSLPPSLPPCGMMGHDDEKRRRPCLCPYPDVCSSSREERRAYLIRMREG
AREGGEKEKEETVAATANGKMTTKTRRRGEGGGGGGGGGEEEEEEGGGGG
GGGGGGEVGGRGRGGEEVSLRPTAIEKEHVHSVYETIAPHWNHTRAIRRV
HWPRVVRFLQSLPPYALIADVGCGDGKYMQLKRFDIHPSAYPLGCDRSLR
LLHCTQGGGEGGRAGGEDAKPVEEKVAVEEKVEVFACDVLKVPFRDNAFD
AALCIAVLHHLSTEAHRIQALRELLRIVRVGGVIDVHVWAMEQEDGSRRR
FESQDTLVPWNMQAKYATSGTAAESSCDNNSNNNNNNGSNNNGSNDGNDW
VDEGKDDKDLSSAAITSISFTTPSSSASTPNTSTSSTSSSSYVHASPPPL
PPSAIPSKVNTSLKLLTYDRYCHLYMEWEIEMLLNEVGHEFECEVIDRGY
DKGNWYVTIRKLGDAYLDF*

protein sequence of NO14G00450.2

>NO14G00450.2-protein ID=NO14G00450.2-protein|Name=NO14G00450.2|organism=Nannochloropsis oceanica|type=polypeptide|length=701bp
MPPTSAMPRPLSRTPPPLEPPHDPQPLQPGLHPAPYGQENVPTRFLYLSG
IGDALKTDLQELRALMETYGPLDDSEGLAIEAPAKRGFVLVRYLDKNSAQ
RAKDALAGVGDKEGEREGRGPPLIGGRRVPKVQYSVMVTADEERNKVPHP
EPLDPFEQASLEVDIPGVMLIENFLTEEEEASLLAFADEEVEGGGGGPKT
TTTTSSSSSSSSSSSTTNISLSSSNSSSSSNSSSKWIEGKEGMTRRVQHY
GYGFDYTTRDVVFHPRPAPLPFLHPSFKPVLKRLLDGGLFRVPPNQMTLN
EYMPGQGINGHVEAHHAFRDGVVSLSLGAPTILELRNAQTGAKKALFLPP
RTALALWGEARYVWTHGIPDRRWDKVRGVRLPREKRRVSYTMRRIIPPLP
LPSLPPSLPPCGMMGHDDEKRRRPCLCPYPDVCSSSREERRAYLIRMREG
AREGGEKEKEETVAATANGKMTTKTRRRGEGGGGGGGGGEEEEEEGGGGG
GGGGGGEVGGRGRGGEEVSLRPTAIEKEHVHSVYETIAPHWNHTRAIRRV
HWPRVVRFLQSLPPYALIADVGCGDGKYMQLKRFDIHPSAYPLGCDRSLR
LLHCTQGGGEGGRAGGEDAKPVEEKVAVEEKVEVFACDVLKVPFRDNAFD
AALCIAVLHHLSTEAHRIQALRELLRIVRVGGVIDVHVWAMEQEDGSRRR
*

Synonyms

Publications