NO14G00390, NO14G00390 (gene) Nannochloropsis oceanica

Overview
NameNO14G00390
Unique NameNO14G00390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2540
Alignment locationchr14:161614..164153 +

Link to JBrowse

Properties
Property NameValue
DescriptionWee1-like protein kinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:161614..164153 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
Homology
[Close]
BLAST of NO14G00390 vs. NCBI_GenBank
Match: XP_020376590.1 (wee1-like protein kinase 2-A [Rhincodon typus])

HSP 1 Score: 81.6 bits (200), Expect = 1.200e-11
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 0 
Query:  616 LKRVDGCLYAVKRLGQRLRTSLEREQALRVVYAWAALADCPKLVRYYDAWIDDDGHLYLQLEFCPGGSLEE 687
            +KR+DGCLYA+KRL + L  SL+ + ALR VYA A L   P +VRYY AW +DD H+ +Q E+C GGSL +
Sbjct:  243 VKRLDGCLYAIKRLKRPLSGSLDEQTALREVYAHAVLGHHPHVVRYYSAWAEDD-HMLIQNEYCNGGSLAD 312
[Close]
BLAST of NO14G00390 vs. NCBI_GenBank
Match: XP_007896861.1 (PREDICTED: wee1-like protein kinase 2-A [Callorhinchus milii])

HSP 1 Score: 80.1 bits (196), Expect = 3.500e-11
Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 0 
Query:  612 VRGVLKRVDGCLYAVKRLGQRLRTSLEREQALRVVYAWAALADCPKLVRYYDAWIDDDGHLYLQLEFCPGGSLEE 687
            V   +KR+DGCLYA+KRL + L  S + + ALR VYA A L   P +VRYY AW +DD H+ +Q E+C GGSL +
Sbjct:  226 VHKCVKRLDGCLYAIKRLKRPLSGSTDEQTALREVYAHAVLGHHPHVVRYYSAWAEDD-HMLIQNEYCNGGSLAD 299
[Close]
BLAST of NO14G00390 vs. NCBI_GenBank
Match: XP_017562711.1 (PREDICTED: wee1-like protein kinase [Pygocentrus nattereri])

HSP 1 Score: 80.1 bits (196), Expect = 3.500e-11
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 0 
Query:  616 LKRVDGCLYAVKRLGQRLRTSLEREQALRVVYAWAALADCPKLVRYYDAWIDDDGHLYLQLEFCPGGSLEE 687
            +KR+DGC+YA+KR  +RL  S+E + ALR VYA A L   P +VRYY AW +D+ H+ +Q EFC GG+L +
Sbjct:  219 VKRLDGCIYAIKRSKKRLAGSVEEQAALREVYAHAVLGQHPHVVRYYSAWSEDE-HMLIQNEFCNGGTLSD 288
[Close]
BLAST of NO14G00390 vs. NCBI_GenBank
Match: XP_024274922.1 (wee1-like protein kinase 1-B isoform X2 [Oncorhynchus tshawytscha])

HSP 1 Score: 79.3 bits (194), Expect = 6.000e-11
Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 0 
Query:  616 LKRVDGCLYAVKRLGQRLRTSLEREQALRVVYAWAALADCPKLVRYYDAWIDDDGHLYLQLEFCPGGSLEE 687
            +KR+DGC+YA+KR  + L  SL+ + ALR VYA A L   P +VRYY AW +DD H+++Q E+C GG+L +
Sbjct:  276 VKRLDGCIYAIKRSKKPLAGSLDEQNALREVYAHAVLGQHPHVVRYYSAWSEDD-HMFIQNEYCNGGTLAD 345
[Close]
BLAST of NO14G00390 vs. NCBI_GenBank
Match: XP_024274921.1 (wee1-like protein kinase 1-A isoform X1 [Oncorhynchus tshawytscha])

HSP 1 Score: 79.3 bits (194), Expect = 6.000e-11
Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 0 
Query:  616 LKRVDGCLYAVKRLGQRLRTSLEREQALRVVYAWAALADCPKLVRYYDAWIDDDGHLYLQLEFCPGGSLEE 687
            +KR+DGC+YA+KR  + L  SL+ + ALR VYA A L   P +VRYY AW +DD H+++Q E+C GG+L +
Sbjct:  276 VKRLDGCIYAIKRSKKPLAGSLDEQNALREVYAHAVLGQHPHVVRYYSAWSEDD-HMFIQNEYCNGGTLAD 345
[Close]
BLAST of NO14G00390 vs. NCBI_GenBank
Match: KPP59533.1 (wee1-like protein kinase-like [Scleropages formosus])

HSP 1 Score: 79.0 bits (193), Expect = 7.800e-11
Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = 0 
Query:  616 LKRVDGCLYAVKRLGQRLRTSLEREQALRVVYAWAALADCPKLVRYYDAWIDDDGHLYLQLEFCPGGSLEE 687
            +KR+DGC+YA+KR  + L  S++ + ALR VYA A L   P +VRYY AW +DD H+ +Q EFC GG+L +
Sbjct:  273 VKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHPHVVRYYSAWAEDD-HMLIQNEFCSGGTLSD 342
[Close]
BLAST of NO14G00390 vs. NCBI_GenBank
Match: KPP76133.1 (hypothetical protein Z043_104551 [Scleropages formosus])

HSP 1 Score: 79.0 bits (193), Expect = 7.800e-11
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 0 
Query:  616 LKRVDGCLYAVKRLGQRLRTSLEREQALRVVYAWAALADCPKLVRYYDAWIDDDGHLYLQLEFCPGGSLEE 687
            +KR+DGCLYA+KRL + L  S + + AL+ VYA A L   P +VRYY AW +DD H+ +Q E+C GGSL +
Sbjct:  244 VKRLDGCLYAIKRLRRPLAGSADEQLALKEVYAHAVLGHHPHVVRYYSAWAEDD-HMIIQNEYCDGGSLSD 313
[Close]
BLAST of NO14G00390 vs. NCBI_GenBank
Match: XP_018616047.1 (PREDICTED: wee1-like protein kinase 1-A [Scleropages formosus])

HSP 1 Score: 79.0 bits (193), Expect = 7.800e-11
Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = 0 
Query:  616 LKRVDGCLYAVKRLGQRLRTSLEREQALRVVYAWAALADCPKLVRYYDAWIDDDGHLYLQLEFCPGGSLEE 687
            +KR+DGC+YA+KR  + L  S++ + ALR VYA A L   P +VRYY AW +DD H+ +Q EFC GG+L +
Sbjct:  275 VKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHPHVVRYYSAWAEDD-HMLIQNEFCSGGTLSD 344
[Close]
BLAST of NO14G00390 vs. NCBI_GenBank
Match: XP_018602982.1 (PREDICTED: wee1-like protein kinase 2 [Scleropages formosus])

HSP 1 Score: 79.0 bits (193), Expect = 7.800e-11
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 0 
Query:  616 LKRVDGCLYAVKRLGQRLRTSLEREQALRVVYAWAALADCPKLVRYYDAWIDDDGHLYLQLEFCPGGSLEE 687
            +KR+DGCLYA+KRL + L  S + + AL+ VYA A L   P +VRYY AW +DD H+ +Q E+C GGSL +
Sbjct:  210 VKRLDGCLYAIKRLRRPLAGSADEQLALKEVYAHAVLGHHPHVVRYYSAWAEDD-HMIIQNEYCDGGSLSD 279
[Close]
BLAST of NO14G00390 vs. NCBI_GenBank
Match: AAH82404.1 (Wee1B protein [Xenopus laevis])

HSP 1 Score: 78.6 bits (192), Expect = 1.000e-10
Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = 0 
Query:  616 LKRVDGCLYAVKRLGQRLRTSLEREQALRVVYAWAALADCPKLVRYYDAWIDDDGHLYLQLEFCPGGSLEE 687
            +KR+DGC+YA+KR  + L  S++ + ALR VYA A L   P +VRYY AW +DD H+ +Q E+C GGSL +
Sbjct:  259 VKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHPHVVRYYSAWAEDD-HMLIQNEYCNGGSLSD 328
The following BLAST results are available for this feature:
BLAST of NO14G00390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_020376590.11.200e-1154.93wee1-like protein kinase 2-A [Rhincodon typus][more]
XP_007896861.13.500e-1152.00PREDICTED: wee1-like protein kinase 2-A [Callorhin... [more]
XP_017562711.13.500e-1152.11PREDICTED: wee1-like protein kinase [Pygocentrus n... [more]
XP_024274922.16.000e-1150.70wee1-like protein kinase 1-B isoform X2 [Oncorhync... [more]
XP_024274921.16.000e-1150.70wee1-like protein kinase 1-A isoform X1 [Oncorhync... [more]
KPP59533.17.800e-1150.70wee1-like protein kinase-like [Scleropages formosu... [more]
KPP76133.17.800e-1152.11hypothetical protein Z043_104551 [Scleropages form... [more]
XP_018616047.17.800e-1150.70PREDICTED: wee1-like protein kinase 1-A [Scleropag... [more]
XP_018602982.17.800e-1152.11PREDICTED: wee1-like protein kinase 2 [Scleropages... [more]
AAH82404.11.000e-1050.70Wee1B protein [Xenopus laevis][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002231NSK002231Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00390.1NO14G00390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|32077gene_5604Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00390.1NO14G00390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00390 ID=NO14G00390|Name=NO14G00390|organism=Nannochloropsis oceanica|type=gene|length=2540bp
ATGTCTCACCCTCCTGCCGGGGCCATGCCAGCAGCAGCCAGCGCGGGCGT
TGCCGTTAATTATGACCATTACCACCATCATCACTCTGACCACGAGGAGG
AGGAGGAGGAGGAAGACGACGAGTCCTTTTTCACACCGCAAAAGGTGCGT
GGCTATCACAACATGGCTTACCTTGGGGCAAGCTCCCTGTCACCATGTAA
GAAAAGAAGTCGGCCGGGAAGCAGTGGGAGAAGTAGCATCCTCGGCATGG
GGTTAAGTGGTCTCGCTGAAAGTGCTGGTGGTGGAGGAGGAGGTGGGGGA
GGAGGAGGAGGCGTCCCTCCTCCCTGGAACGTTGTGCCGCCCGCTGGTTT
CTTCAAACGTGCAGCGCCTGCCGCTGCTGTTGTCGCTGCTACGGCGGCTG
CGGCTGCTGTTGCTGCTGTCCCTTCCTCTGCTTCCTCCCGTACGCCCTCC
TCTTTGTCTACTTCCTCGGGTTTGTCCTCCGCTTGTCGTGCCCCGCGGCA
AAGTGATGGGCACGAATACCGTCCTTTAATGCGCGACTCTCTCTGCATGA
AAAGCGGACGAGGAGGAGAGAGAGGAGGAGGAAGGAGACGGAGGAGCTCG
GCTTCCTCCTACACGACTGCGGTCTCCTCATTGTCAACGCCGGGTGAGAT
GGATGAAGGAGGAGGGGAATGGGATGGGGGAAGGAGGATGTCATTTGTAA
GTACCAATACGAAGGCGAAGAGGACTGAGCATTCAACCACTTCTGAAGAG
GAGATGGCGGAGGAGGGAGGGGAGGAGGAAGAGGGGGAGGAGCAGGAGCA
GGAGCAGGAGCAGGAGGAGGCGGAATGGCCGGACCTCCACCCTGACGGTC
GGAGTAGGCCTCAAATCATCCTTCAAGCCCGCCCTCCCTCCCACCTTCTC
CCCGGTCGGGCCCTGCGTGCCCCAACCGCTTCTTCCTCCTCCTCCTCCTC
CCTCTGCTCCTCCTCCTCCTTCTTATCCTTGCCTTCATGTGGAGCCAAGG
CGGCGACGGCAGCAGCAGCAGCAGCAGCAGTAGCACCGGCGGTGACTGGG
GCATCGAACTCCCAGCGGTGGCAGCAGCAGCATGAGCAATTTTCGCAGGC
AGAGGCGGGGATGGAAGGCCTTGGGTGGGCGGGAAGCCAAGGGTCAGAGG
AGCGAGGGATGGAGGAAGGGGAGCAGGAAGTTATGGAGGAGGAGGAAGAG
GAGGAGGAAGGGGAATGGGCGCCATCTCGACCTTCGTTGGGGATAGGATC
ACTGAGGCTGTACGAGGACGAGGACGAGGACGAGGAGGGGATGATGTACC
CTCGCCAGACCCCTCCCTTGCCCTTGACGCTGCTCCCTGTGGCCGGTATG
CCTCCAGCTGCTGCAGCAGCAGCAGCAGCAGCAACAGCAGCGCCGGGAGT
ACCCCTATCTGCAGGAAGAGCAGTGACAGGAGGAGGAGCAGCAGCATCAG
CTCCCTTTCTATTCTGCAATCGCAACCCTTTTCTGCCCTCCCCCCCTTCC
TCTTCCTCCTCTTCCTCCTCCTCCGCCATCCCCTCTTTTTCCTCCTCCAG
AAGAACATTCCCTCTCTACGGTGGATGTGGCAGCATTTGTGCTGCCCCTC
CTTCTCGTTCTCCCCGTGCGCCCTCCCTCCCTCCCTCCCTTCCTTCCACC
CTCTCCCGCTACACCTCGGAGTTTGAAGACCTCGGGCCTCTCGACCCTCC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCCCCTCCT
CGTTGCTCCATCCACCCACCCGTAGCAGCAGCCACAGCAGCAACAGCAAC
AACAACAGCAACAAGAGGCATAAGCACAGATTGGTCCGTGGTGTCCTCAA
GCGCGTCGACGGCTGCCTCTACGCGGTTAAACGCCTCGGGCAGCGTCTTC
GGACAAGCCTTGAAAGAGAGCAGGCCCTCCGAGTGGTGTATGCATGGGCC
GCCCTGGCCGATTGCCCTAAGCTTGTGCGgtacgtcttcctttcctccct
ccatccatccctccctgccgaagttgtcactcacccttctttcttccttc
ccttcctccccccctccctcctagGTACTATGACGCATGGATCGATGACG
ATGGCCACCTCTACCTCCAACTGGAATTCTGCCCAGGCGGGTCCCTCGAG
GAGAGAGCCTTGGGTGGGAGGGAGGGAGGGAAGGAGGTCAAAGCTGTTGT
AGCGGCAGCGGCGGCGAGAGGCGTGGCTGCTTTCGCCCCTCCACCTGCCC
TTTGCTCGTCCTTGTGCTCCCCCGTCCTGTGGCGGAGCAGTGGCAGCAGC
TGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAG
TAGTAGTAGTAGTAGTAGTAGCAGCAGCAGCAGTAACAGCCCCATTTCCT
CCTCCTCCTCCTCCTCCTCTTCCTCCTTCCCGTCCTCCTCCCCTTCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCTCCTTGGACC
GGCACCCCCTCCGAGATCCTCGTCGTCCTCAGGGACATAG
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protein sequence of NO14G00390.1

>NO14G00390.1-protein ID=NO14G00390.1-protein|Name=NO14G00390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=815bp
MSHPPAGAMPAAASAGVAVNYDHYHHHHSDHEEEEEEEDDESFFTPQKVR
GYHNMAYLGASSLSPCKKRSRPGSSGRSSILGMGLSGLAESAGGGGGGGG
GGGGVPPPWNVVPPAGFFKRAAPAAAVVAATAAAAAVAAVPSSASSRTPS
SLSTSSGLSSACRAPRQSDGHEYRPLMRDSLCMKSGRGGERGGGRRRRSS
ASSYTTAVSSLSTPGEMDEGGGEWDGGRRMSFVSTNTKAKRTEHSTTSEE
EMAEEGGEEEEGEEQEQEQEQEEAEWPDLHPDGRSRPQIILQARPPSHLL
PGRALRAPTASSSSSSSLCSSSSFLSLPSCGAKAATAAAAAAAVAPAVTG
ASNSQRWQQQHEQFSQAEAGMEGLGWAGSQGSEERGMEEGEQEVMEEEEE
EEEGEWAPSRPSLGIGSLRLYEDEDEDEEGMMYPRQTPPLPLTLLPVAGM
PPAAAAAAAAATAAPGVPLSAGRAVTGGGAAASAPFLFCNRNPFLPSPPS
SSSSSSSSAIPSFSSSRRTFPLYGGCGSICAAPPSRSPRAPSLPPSLPST
LSRYTSEFEDLGPLDPPSSSSSSSSSSSSSSPSSLLHPPTRSSSHSSNSN
NNSNKRHKHRLVRGVLKRVDGCLYAVKRLGQRLRTSLEREQALRVVYAWA
ALADCPKLVRYYDAWIDDDGHLYLQLEFCPGGSLEERALGGREGGKEVKA
VVAAAAARGVAAFAPPPALCSSLCSPVLWRSSGSSCSSSSSSSSSSSSSS
SSSSSSSSSSSSSNSPISSSSSSSSSSFPSSSPSSLPPSLPPSLPPSPLL
GPAPPPRSSSSSGT*
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Synonyms
Publications