NO14G00200, NO14G00200 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G00200 vs. NCBI_GenBank
Match: EWM24778.1 (hypothetical protein Naga_100446g4 [Nannochloropsis gaditana]) HSP 1 Score: 233.8 bits (595), Expect = 5.400e-58 Identity = 114/167 (68.26%), Postives = 133/167 (79.64%), Query Frame = 0 Query: 1 MECVDGVCKFVPKSQRGGGHKGVGENDENVAPALPLVAVGDKLPMPLPLEQLEEGGKATTLQSLCSERGDRGRVVVLDLWSNACVRCPEALDKLNALAERMKEDVEKGLVIFASVNIDDKAKARGLIAERKWTSLSHLFVDAATKEMLKARFGLASVPFVMVFDQEG 168 MEC DGVCKFVP+SQRG +G N+ENV PALPLV+VGDK PMPL E LEEGG++ +LQ LC+ D GRVVVLDLWSNACVRCPEALDKLN ++ +EDV+K V FA+VNIDDK KAR L+AER+W L+H ++DA TK+ LKARFGL SVPFVMVFDQ G Sbjct: 1 MECADGVCKFVPRSQRG---VQIGGNEENVEPALPLVSVGDKPPMPLIFETLEEGGRSFSLQRLCAAGEDGGRVVVLDLWSNACVRCPEALDKLNQMSSACQEDVKKHRVTFAAVNIDDKVKARALVAERQWDCLAHFYIDAGTKDTLKARFGLQSVPFVMVFDQVG 164
BLAST of NO14G00200 vs. NCBI_GenBank
Match: OEU22258.1 (hypothetical protein FRACYDRAFT_258990 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 85.9 bits (211), Expect = 1.800e-13 Identity = 41/120 (34.17%), Postives = 72/120 (60.00%), Query Frame = 0 Query: 71 RGRVVVLDLWSNACVRCPEALDKLNALAERMK-EDVEKGLVIFASVNIDDKAKARGLIA---ERKWTSLSHLFVDAATKEMLKARFGLASVPFVMVFDQEGTLSQMGNPKKIDFDALPAM 187 +G+ V+D W+ C +CP+ALDKL+ +A+ K +DV+ F S+ D AR +I + +W +++H F+D KE K G VPF +V D+ G+++Q G+ +++DF+ +P + Sbjct: 28 KGKNTVIDFWTTGCTQCPDALDKLDDMAQDPKYKDVQ-----FISICCDKLDGARDIIERDDDLRWQNVNHYFMDKEDKETAKKLLGFKQVPFYVVMDENGSITQSGSGRQVDFEEVPGV 142
BLAST of NO14G00200 vs. NCBI_GenBank
Match: KOO28056.1 (redoxin domain-containing protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 79.0 bits (193), Expect = 2.200e-11 Identity = 49/172 (28.49%), Postives = 84/172 (48.84%), Query Frame = 0 Query: 54 EGGKATTLQSLCSERGDRGRVVVLDLWSNACVRCPEALDKLNALAERMKEDVEKGLVIFASVNIDDKAKARGL------IAERKWTSLSHLFVDAATKEMLKARFGLASVPFVMVFDQEGTLSQMGNPKKIDFDAL--PAMWKAKRQVGNEAKKEGGIDRQKKEDVAKEEMP 218 + G++TTL + + G+ +VLD W C +CP A+ KL+ +A + + V FA+ + ++ G + E +W +L H+++ A KE K +FG +PF +VF +GT+ G+P+ IDF + P A A+++ D K V +E P Sbjct: 19 KAGESTTLAAFRA-----GKPLVLDFWHTRCTKCPTAISKLDTIAPKHPD------VTFAACALSLGSETEGTQEQVLDLLEGQWENLRHMYMTVAEKEAAKTQFGFTQLPFAVVFGADGTILFSGDPQGIDFATVFAPKPVAAAVAAAPNAEQQLSADLASKASVCAKEAP 179
BLAST of NO14G00200 vs. NCBI_GenBank
Match: GAX27682.1 (hypothetical protein FisN_13Hh223 [Fistulifera solaris]) HSP 1 Score: 75.5 bits (184), Expect = 2.400e-10 Identity = 40/107 (37.38%), Postives = 56/107 (52.34%), Query Frame = 0 Query: 71 RGRVVVLDLWSNACVRCPEALDKLNALAERMKEDVEKGLVIFASVNIDDKAKARGLIA---ERKWTSLSHLFVDAATKEMLKARFGLASVPFVMVFDQEGTLSQMGN 175 RG V+D W+ C CP+ALDKL LA V FAS+ D AR +I + +W+S+ H F++ A KE+ K FG VPF +V + ++Q GN Sbjct: 26 RGHHTVIDFWTTRCTNCPDALDKLQHLAATSSN------VRFASICCDSLDGAREIIGRHDDMRWSSVHHYFMEHADKELCKQIFGFKKVPFYVVLNDRNEITQYGN 126
BLAST of NO14G00200 vs. NCBI_GenBank
Match: GAX27221.1 (hypothetical protein FisN_13Lh223 [Fistulifera solaris]) HSP 1 Score: 75.5 bits (184), Expect = 2.400e-10 Identity = 46/140 (32.86%), Postives = 71/140 (50.71%), Query Frame = 0 Query: 47 LPLEQLEEGGKATTLQSLCSERGDRGRVVVLDLWSNACVRCPEALDKLNALAERMKEDVEKGLVIFASVNIDDKAKARGLIA---ERKWTSLSHLFVDAATKEMLKARFGLASVPFVMVFDQEGTLSQMGNPKKIDFDAL 184 LPL L+ + T + C G+ V+D W+ C CP+AL+KL LA V FAS+ D AR +I + +W+S+ H F++ KE+ K FG VPF +V + + ++Q GN KI++D + Sbjct: 7 LPLICLDTAEETNTHEITC------GQHTVIDFWTTRCTNCPDALNKLQHLAATSSN------VRFASICCDSLDGAREIIGRHDDMRWSSVHHYFMEHVDKELCKHIFGFKQVPFYVVLNAQNEITQYGN--KINWDPI 132
BLAST of NO14G00200 vs. NCBI_GenBank
Match: XP_002179487.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49310.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 71.6 bits (174), Expect = 3.500e-9 Identity = 50/157 (31.85%), Postives = 76/157 (48.41%), Query Frame = 0 Query: 78 DLWSNACVRCPEALDKLNALAERMKEDVEKGLVIFASVNIDDKAKARGLI---AERKWTSLSHLFVDAATKEMLKARFGLASVPFVMVFDQEGTLSQMGNPKKIDFDALPAMWKAKRQVGNEAKKEGGIDRQKKE---DVAKEEMPVKALQAFTLDE 229 D W+ C RCP+ALDKL+ LA + V F S+ D AR +I E +W ++ H F++ KE K G ++VPF ++ +++G QMGN IDF+ L V E +KE + + V K E+ L F++D+ Sbjct: 65 DFWTTRCTRCPDALDKLDDLAAAPR----FANVQFVSICCDKLDGAREIIEKETEPRWQNVDHYFMEHQYKEEAKNVLGFSAVPFYVMLNEKGETIQMGN--AIDFERLAVEEAEPDSVATENEKENMLTIENPVVDLHVGKNELRAIKLDDFSVDD 215
BLAST of NO14G00200 vs. NCBI_GenBank
Match: XP_009033675.1 (hypothetical protein AURANDRAFT_70838 [Aureococcus anophagefferens] >EGB11290.1 hypothetical protein AURANDRAFT_70838 [Aureococcus anophagefferens]) HSP 1 Score: 70.9 bits (172), Expect = 6.000e-9 Identity = 36/101 (35.64%), Postives = 56/101 (55.45%), Query Frame = 0 Query: 83 ACVRCPEALDKLNALAERMKEDVEKGLVIFASVNIDDKAKARGLIAERKWTSLSHLFVDAATKEMLKARFGLASVPFVMVFDQEGTLSQMGNPKKIDFDAL 184 A VRCP L KL+ E D V FASV +DD A+ ++ E +W ++H +DA TKE+ KA +G +VP+++V D G + G+ K+ + + Sbjct: 27 ALVRCPACLTKLDGFVEAFGGD-----VAFASVCLDDPEFAKEIVEEHEWERMAHAGMDAETKELAKAHWGFKAVPYLVVLDATGETAFAGSALKVTAETI 122 The following BLAST results are available for this feature:
BLAST of NO14G00200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G00200 ID=NO14G00200|Name=NO14G00200|organism=Nannochloropsis oceanica|type=gene|length=1833bpback to top protein sequence of NO14G00200.1 >NO14G00200.1-protein ID=NO14G00200.1-protein|Name=NO14G00200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=231bpback to top Synonyms
Publications
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