NO13G03380, NO13G03380 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G03380 vs. NCBI_GenBank
Match: WP_013969410.1 (TIGR00266 family protein [Treponema caldarium] >AEJ20120.1 protein of unknown function DUF124 [Treponema caldarium DSM 7334]) HSP 1 Score: 71.6 bits (174), Expect = 6.900e-9 Identity = 58/234 (24.79%), Postives = 109/234 (46.58%), Query Frame = 0
Query: 52 AALEVIFDRRKNESIIADFALIVSRSGNLSLVQEGKQSWLDNGIAVVAALGKKKEGEEVRERIYAQAEQGGSVILAPEYPGNVVIFSMREAIPVIRPSISATAYLPTALLSASTGYMVMAGTHI-LAREGSITSHAIRDCHLTKMLGLAGVRHYQGTGKLALASYGNILRRDLRHGEECIVKKGHLLAWSADIKISRRAGRKVMTANSNEAKGFV--LQGPGTFYVKSHTVSNL 283
+ L +IF+ E + A+ ++S SG + L + +G V LG GE + Y G +ILAP YPG+++ +R+ + A +G + TH+ L+ +GS+ + L GL ++ G+G L LASYG I+ + L G+E +V G+++A+ A + + + + + ++ +G V +GPG ++++ ++S L
Sbjct: 12 SVLRLIFE--AGEQVRAEAGAMISMSGTMELKAK------TSGKGVFGTLGAMMGGESLFASEYTAGTSGDELILAPSYPGDILHLPLRD-----------------ETIFAQSGAYLAGSTHLQLSSQGSLKA-------LVSGEGLF-LQKISGSGDLWLASYGAIIEKQLNAGDEYVVDTGNMVAFDASLSYTIQTASRGLFSSMASGEGLVCRFRGPGRLWLQTRSISAL 212
BLAST of NO13G03380 vs. NCBI_GenBank
Match: PKN95530.1 (TIGR00266 family protein [Chloroflexi bacterium HGW-Chloroflexi-6]) HSP 1 Score: 68.6 bits (166), Expect = 5.800e-8 Identity = 57/226 (25.22%), Postives = 103/226 (45.58%), Query Frame = 0
Query: 63 NESIIADFALIVSRSGNLSLVQEGKQSWLDNGIAVVAALGKK-KEGEEVRERIYAQAEQGGSVILAPEYPGNVVIFSMREAIPVIRPSISATAYLPTALLSASTGYMVMAGTHILAREGSITSHAIRDCHLTKMLGLAGVRHYQGTGKLALASYGNILRRDLRHGEECIVKKGHLLAWSADIKI-SRRAGRKVMTANSNEAKGFVLQGPGTFYVKSHTVSNLHAWL 287
NE I A+ +VS S ++++ + + + +LG+ GE + + +GG + LAPE PG++ + +++ +I+ + L++ TG + A I+ A ML G GK+ ++SYG I R+L+ GE+ +V HL+A+ A+I + +R AG T S E + GPG Y+++ + L W+
Sbjct: 21 NERIRAEAGAMVSMSASVNIETKAEG-------GLFKSLGRALLGGESFFQNFFQAGPEGGEITLAPELPGDIAVIELKDKPLMIQSG---------SYLASETGVDLNA---------KISMKAFMSAEGISML------ESSGQGKVLVSSYGAIFDRELKDGEKYVVDTTHLVAFDANINVTTRTAGGLKSTLLSGEGLVVEMTGPGKIYIQTRSPKALINWI 215
BLAST of NO13G03380 vs. NCBI_GenBank
Match: PKO14348.1 (TIGR00266 family protein [Chloroflexi bacterium HGW-Chloroflexi-10]) HSP 1 Score: 67.8 bits (164), Expect = 9.900e-8 Identity = 58/226 (25.66%), Postives = 95/226 (42.04%), Query Frame = 0
Query: 63 NESIIADFALIVSRSGNLSLVQEGKQSWLDN-GIAVVAALGKKKEGEEVRERIYAQAEQGGSVILAPEYPGNVVIFSMREAIPVIRPSISATAYLPTALLSASTGYMVMAGTHILAREGSITSHAIRDCHLTKMLGLAGVRHYQGTGKLALASYGNILRRDLRHGEECIVKKGHLLAWSADIKI-SRRAGRKVMTANSNEAKGFVLQGPGTFYVKSHTVSNLHAWL 287
NE I D +VS S ++ + + + +L + G AV+ GE + + QGG V LAP+ PG++ + M +I+ + L + +G AG + E S G+GKL ++SYG I +DL GE+ IV HL+A+ + + + G T S E L GPG Y+++ + L +W+
Sbjct: 21 NERIRTDSGSMVSHSADVEIETKAEGGFLKSLGRAVLG-------GESFFQNFWKAGAQGGEVTLAPDLPGDMAMIQMTGQTLMIQSGSYLASEAGIELSTKLSGKAFKAGEGVSMLEAS------------------------GSGKLLVSSYGAIFEKDLASGEKYIVDSSHLVAFDGSMNVEALSVGGLKSTLLSGEGLVVQLTGPGHIYIQTRSPQALISWI 215
BLAST of NO13G03380 vs. NCBI_GenBank
Match: PKN98779.1 (TIGR00266 family protein [Chloroflexi bacterium HGW-Chloroflexi-4]) HSP 1 Score: 67.4 bits (163), Expect = 1.300e-7 Identity = 62/227 (27.31%), Postives = 101/227 (44.49%), Query Frame = 0
Query: 63 NESIIADFALIVSRSGNLSLVQEGKQSWLDN-GIAVVAALGKKKEGEEVRERIYAQAEQGGSVILAPEYPGNVVIFSMREAIPVIRPSISATAYLPTALLSASTGYMVMAGTHILAREGSITSHAIRDCHLTKMLGLAGVRHYQGTGKLALASYGNILRRDLRHGEECIVKKGHLLAWSA--DIKISRRAGRKVMTANSNEAKGFVLQGPGTFYVKSHTVSNLHAWL 287
NE I AD +VS S ++ + + + + G AV+ GE + + QGG V LAP+ PG++V + IP+ MV +G++ LA E I ++ K + G+GKL ++SYG I ++L GE+ IV HL+A+ A D+++ G K T S E + GPG Y+++ + L +W+
Sbjct: 21 NERIRADSGAMVSHSASVEVETKAEGGLFKSLGRAVLG-------GESFFQNFWLAGPQGGEVTLAPDLPGDIVQIDL-TGIPL----------------------MVQSGSY-LASENGIDLNSKFSMKAFKAGEGVSMLEATGSGKLLVSSYGAIFEKELAPGEKYIVDSSHLVAFYATMDVQVKSVGGLK-STLLSGEGLVVEITGPGKIYIQTRSPQALISWI 215
BLAST of NO13G03380 vs. NCBI_GenBank
Match: CCA75046.1 (hypothetical protein PIIN_09031 [Serendipita indica DSM 11827]) HSP 1 Score: 67.0 bits (162), Expect = 1.700e-7 Identity = 62/195 (31.79%), Postives = 91/195 (46.67%), Query Frame = 0
Query: 100 ALGKKKEGEEVRERIYAQAEQGGSVILAPEYPGNVVIFSMREAIPVIRPSISATAYLP-TALLSAST---GYMVMAGTHILAREGSITSHAIRDCHLTKMLGLAGVRHYQGTGKLALASYGNILRRDLRHGEECIVKKGHLLAWSADI---KISRRAGRKVMTANSNEAKGFVLQGPGTFYVKSHTVSNLHAWLS 288
+L K G E+ E Y G VILAPE G++V ++ P S+ AYL TA ++ ST G+M +++ EG V +G G L + S G I+RRDLR GEE IV GHL+AWSA +I G + +++ E +GPGT Y+++ +L W++
Sbjct: 119 SLSKMITGGEMSESKYTGP---GEVILAPEVWGDIVPIQIQ---PNTSWSVGKDAYLACTANVTRSTKSQGFM----KGLMSGEGFF------------------VARVEGQGVLFVQSLGAIVRRDLRPGEEWIVDNGHLVAWSASYTMERIQTTGGGFLSGSHTGEGAVCRFRGPGTVYLQTRNPQSLGQWIA 285
BLAST of NO13G03380 vs. NCBI_GenBank
Match: KIO20278.1 (hypothetical protein M407DRAFT_138331 [Tulasnella calospora MUT 4182]) HSP 1 Score: 67.0 bits (162), Expect = 1.700e-7 Identity = 37/98 (37.76%), Postives = 54/98 (55.10%), Query Frame = 0
Query: 201 VRHYQGTGKLALASYGNILRRDLRHGEECIVKKGHLLAWSADIKISR-RAGRKVMTANSNEAKGFVLQGPGTFYVKSHTVSNLHAWLSYPARQRQIPS 298
V G G L + S G I++R+LR GEE +V GHL+AW+A KI R + G + A ++E GPGT Y+++ NL W+ Q Q+P+
Sbjct: 94 VTEVTGQGILFVQSLGAIIKRELRQGEEWVVDNGHLVAWTATYKIERIKGGGFISRAATDEGLVCRFTGPGTIYIQTRNPENLIGWI-----QAQMPA 186
BLAST of NO13G03380 vs. NCBI_GenBank
Match: PKO03218.1 (TIGR00266 family protein [Chloroflexi bacterium HGW-Chloroflexi-5]) HSP 1 Score: 66.6 bits (161), Expect = 2.200e-7 Identity = 60/226 (26.55%), Postives = 97/226 (42.92%), Query Frame = 0
Query: 63 NESIIADFALIVSRSGNLSLVQEGKQSWLDN-GIAVVAALGKKKEGEEVRERIYAQAEQGGSVILAPEYPGNVVIFSMREAIPVIRPSISATAYLPTALLSASTGYMVMAGTHILAREGSITSHAIRDCHLTKMLGLAGVRHYQGTGKLALASYGNILRRDLRHGEECIVKKGHLLAWSADIKI-SRRAGRKVMTANSNEAKGFVLQGPGTFYVKSHTVSNLHAWL 287
NE I AD +VS S ++++ + + + G AV+ GE + + QGG V LA PG++ M T MV +G++ LA E I ++ K + G+GKL ++SYG I ++L GE+ IV HL+A+SA + + ++ G T S E L GPG Y+++ + L +W+
Sbjct: 21 NERIRADSGAMVSHSASVAVETKAEGGLFKSLGRAVLG-------GESFFQNFWVAGPQGGEVTLAANLPGDIAQIDM-----------------------TGTPLMVQSGSY-LASENGIDLNSKFSMKAFKAGEGVSMLEATGSGKLLVSSYGAIFEKELVPGEKYIVDTSHLVAFSATMDVQTKSVGGLKSTILSGEGLVVELTGPGNLYIQTRSPQALISWI 215
BLAST of NO13G03380 vs. NCBI_GenBank
Match: WP_062421689.1 (TIGR00266 family protein [Leptolinea tardivitalis] >GAP21406.1 TIGR00266 family protein [Leptolinea tardivitalis] >KPL73283.1 hypothetical protein ADM99_03415 [Leptolinea tardivitalis]) HSP 1 Score: 66.2 bits (160), Expect = 2.900e-7 Identity = 54/226 (23.89%), Postives = 100/226 (44.25%), Query Frame = 0
Query: 63 NESIIADFALIVSRSGNLSLVQEGKQSWLDN-GIAVVAALGKKKEGEEVRERIYAQAEQGGSVILAPEYPGNVVIFSMREAIPVIRPSISATAYLPTALLSASTGYMVMAGTHILAREGSITSHAIRDCHLTKMLGLAGVRHYQGTGKLALASYGNILRRDLRHGEECIVKKGHLLAWSADIKISRRA-GRKVMTANSNEAKGFVLQGPGTFYVKSHTVSNLHAWL 287
+E + AD +VS S + + + + L + G AV+ GE + + QGG V LAP+ PG++ T + + T ++ +G+++ + +G S + G + + G+GK+ ++SYG I ++L GE IV HL+A+ +I ++ ++ G T S E L GPG Y+++ + L +W+
Sbjct: 21 SERVRADSGAMVSHSAGVEVETKAEGGLLKSLGRAVLG-------GESFFQNFWKAGPQGGEVTLAPDLPGDI-----------------------TCITMSGTSLLIQSGSYLASEDGIDISGKLSGKAFLSGEGFS-MLEATGSGKILVSSYGAIYEKELSSGERYIVDTTHLVAFDGNIGVTTKSVGGLKSTFLSGEGLVVELTGPGRIYMQTRSPQALISWI 215
BLAST of NO13G03380 vs. NCBI_GenBank
Match: PNS19136.1 (ERAD-associated E3 ubiquitin-protein ligase doa10 [Elsinoe sp. CQ-2017a]) HSP 1 Score: 64.7 bits (156), Expect = 8.400e-7 Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 0
Query: 206 GTGKLALASYGNILRRDLRHGEECIVKKGHLLAWSADIKISRRAGRKVMTANSNEAKGFVLQ--GPGTFYVKSHTVSNLHAWLS 288
GTG + +AS+G ILRRDLR GE+ I+ GHL+AW+ + R A ++ ++ + +G V + GPGT Y+++ AW+S
Sbjct: 343 GTGVVWVASFGAILRRDLRDGEKYIIDNGHLVAWNCKYNLERVASGGII-SDMSAGEGLVCKFTGPGTVYMQTRNPQAFTAWMS 425 The following BLAST results are available for this feature:
BLAST of NO13G03380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G03380 ID=NO13G03380|Name=NO13G03380|organism=Nannochloropsis oceanica|type=gene|length=3411bpback to top protein sequence of NO13G03380.1 >NO13G03380.1-protein ID=NO13G03380.1-protein|Name=NO13G03380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=449bpback to top Synonyms
Publications
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