NO13G03360, NO13G03360 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO13G03360 vs. NCBI_GenBank
Match: XP_005855524.1 (hypothetical protein NGA_0609100 [Nannochloropsis gaditana CCMP526] >EKU20836.1 hypothetical protein NGA_0609100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 219.2 bits (557), Expect = 2.700e-53 Identity = 104/183 (56.83%), Postives = 136/183 (74.32%), Query Frame = 0 Query: 207 YLSLVSFLETGTWEEEEEEKSITFKGE---WGSWNEYYNLSTSSLNGNEVCDCYREGSRPPYVENRYYTNEEKDLRVTFIGWFGDLAPRGHALPSSSPPTRESLGCSPGGCRGPFNWKVPSIASFLQGSFLRDTLRPTTLLLNTGLWKELDESELKAITAAAKNLTVSKPVEVFWKTTTSSSL 387 YLSL+ +LE G W E +EK++TFKG +WN++Y S++ EVCDCYRE + P+VENRYY NEEKDLRV+FIGWFG+ PRGHA+P+S+P T+++LGC+PG C+GP NW+ P ++S LQGSFLR T+RPT L LN GLW + + L + AAKNL+ S+ V+VFWKTTTS SL Sbjct: 8 YLSLIRYLEEGAW-EATQEKTLTFKGASRLKETWNDFYRRSSAFFGVREVCDCYREEGKAPHVENRYYVNEEKDLRVSFIGWFGNHPPRGHAIPASAPLTQDALGCAPGACQGPVNWEAP-VSSLLQGSFLRATVRPTHLFLNAGLWGPISGAVLSDVVEAAKNLSTSEHVDVFWKTTTSRSL 188
BLAST of NO13G03360 vs. NCBI_GenBank
Match: EWM20761.1 (hypothetical protein Naga_100405g3 [Nannochloropsis gaditana]) HSP 1 Score: 202.2 bits (513), Expect = 3.400e-48 Identity = 96/182 (52.75%), Postives = 129/182 (70.88%), Query Frame = 0 Query: 226 KSITFKGE---WGSWNEYYNLSTSSLNGNEVCDCYREGSRPPYVENRYYTNEEKDLRVTFIGWFGDLAPRGHALPSSSPPTRESLGCSPGGCRGPFNWKVPSIASFLQGSFLRDTLRPTTLLLNTGLWKELDESELKAITAAAKNLTVSKPVEVFWKTTTSSSLKATWVNDSSPRSAFIANG 405 +++TFKG +WN++Y S++ EVCDCYRE + P+VENRYY NEEKDLRV+FIGWFG+ PRGHA+P+S+P T+++LGC+PG C+GP NW+ P ++S LQGSFLR T+RPT L LN GLW + + L + AAKNL+ S+ V+VFWKTTTS S KA+ V ++ G Sbjct: 20 QTLTFKGASRLKETWNDFYRRSSAFFGVREVCDCYREEGKAPHVENRYYVNEEKDLRVSFIGWFGNHPPRGHAIPASAPLTQDALGCAPGACQGPVNWEAP-VSSLLQGSFLRATVRPTHLFLNAGLWGPISGAVLSDVVEAAKNLSTSEHVDVFWKTTTSRSEKASTVRKEGGKTLLTRGG 200
BLAST of NO13G03360 vs. NCBI_GenBank
Match: EWM20765.1 (hypothetical protein Naga_100907g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 139.0 bits (349), Expect = 3.500e-29 Identity = 87/202 (43.07%), Postives = 112/202 (55.45%), Query Frame = 0 Query: 4 PPAPHREAASWSVWSLAAGLLIVALASSLLAVMDPSALVLSHHPRDRSGGPGDTSPFLVLHQQPRYSPLSVTMEH-PHSDEQRKKK---GXXXXXXXXXEDTVPAF--KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFLPQCSYSILQAAPEAVSWSTKEGEG--EGGKEGKA---VYSPEHKLCILRTFE 195 P P++E +WSVWSLAAGLLIVALASSLLAVMDPSAL+L+ H +D G G ++PFL+ HQ+PRY+PL V H P +D +R+KK G E + A+ + SFLP CSYSILQAAP++V W+ +G GGKEG+A Y+P H LC+LR F+ Sbjct: 23 PAWPNQETRTWSVWSLAAGLLIVALASSLLAVMDPSALILTRHMKDGGSGSGTSTPFLLRHQEPRYAPLRVPDAHLPETDPRRRKKSEGGKKGGQSHEKEVSNNAWGPEAAGALNGTVDGSRGSDASSLEDSAELPPLPSLGPPAPSSFLPPCSYSILQAAPDSVKWTVAATKGGRAGGKEGEADGMTYTPRHALCVLRGFD 224
BLAST of NO13G03360 vs. NCBI_GenBank
Match: EWM25925.1 (hypothetical protein Naga_100134g12 [Nannochloropsis gaditana]) HSP 1 Score: 94.7 bits (234), Expect = 7.600e-16 Identity = 83/318 (26.10%), Postives = 121/318 (38.05%), Query Frame = 0 Query: 207 YLSLVSFLETGTWEEEEEEKSITFKGEWGSWNEYYNLSTSSLNGNEVCDCYRE--GSRPPYVENRYYTNEEKDLRVTFIGWFG----------------------DLAPRGH------------------------------ALP------------SSSPPTRESLGCSPGGCRGPFNWKVPSIASFLQGSFLRDTLRPTTLLLNTGLWKELDES-ELKAITAAAKNLTVSKPVEVFWKTTTSSSLKATWVNDSSPRSAFIANGMKVFDSSLFTQAL---------RPSLPAYRDGTTHFVPSVYRGLNLLLFNEIC 449 YL+LV+FLE G W + + F +W W +Y + + NG E+CDCYRE R +ENRYY NE D+ VTF WF D AP+ + A+P +SS P+R+ GC PG C +W F + L P L+ N+G W L + +L+ + +A V +KTTT + + + + F G+ + D+ T + S + DG HF VY GLN +L N +C Sbjct: 161 YLNLVNFLENGVWGGPDPQLENEF--QWKGWLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSMRSDASAMPLTSTLHLLEEKEASSIPSRQR-GCEPGACDQEPHWVYDVYGLFTN---VVPLLNPDVLVFNSGHWGRLPGAYDLEQLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDG-LHFYAPVYEGLNKVLLNYLC 471
BLAST of NO13G03360 vs. NCBI_GenBank
Match: XP_005839899.1 (hypothetical protein GUITHDRAFT_133326 [Guillardia theta CCMP2712] >EKX52919.1 hypothetical protein GUITHDRAFT_133326 [Guillardia theta CCMP2712]) HSP 1 Score: 87.4 bits (215), Expect = 1.200e-13 Identity = 84/294 (28.57%), Postives = 118/294 (40.14%), Query Frame = 0 Query: 207 YLSLVSFLET----GTWEEEEEEKSITFKG-EWGSWNEYYNLSTSSLNGNEVCDCYR-EGSRPPYVENRYYTNE------EKDLRVTFIGWFGDLAPRGHALPSSSPPTRESLGCS------------------------PGGCRGP-FNWK--VPSIASFLQGSFLRDTLRPTTLLLNTGLWKELDESELKAITAAAKNLTVSKPVEVFWKTTTS---------SSLKATW----VNDSSPRSAFIANGMKVFDSSLFTQALRPSLPAYRDGTTHFVPSVYRGLNLLLFNEIC 449 Y+SL S L T EEE ++ G WG+W +Y S+ S G E+CDCYR EG P E R N +L ++++ FG GH + S CS P G F+W+ VP++ + ++P L+ NTGLW EL E + AA + V K +WK TT + TW V D+ P+ G +V+D++ T+ L A+ DG H P VY LN LL N +C Sbjct: 733 YMSLASLLHARYPERTGNEEEGRNNVCMPGLVWGTWRRFYLDSSRSFQGRELCDCYRPEGPWSPEFEMRVEENRFFSLLPPSNLSLSYLQVFGGFPMHGHFPGECRQRSSSSSSCSFHNLSRAALTAAAKVLTEEEYDHNPQLDTGSFFDWQGDVPTVLEHVASE-----MQPDMLVFNTGLWGELKEEDYVEDVFAAGSRAVGKGGSCYWKRTTKRFKCSGGSRRCERRTWVAEEVEDTVPQQKARKLGWEVYDTAAPTRLLEQD--AFADG-IHPRPYVYEELNNLLLNALC 1018
BLAST of NO13G03360 vs. NCBI_GenBank
Match: EWM25922.1 (hypothetical protein Naga_100134g10 [Nannochloropsis gaditana]) HSP 1 Score: 85.5 bits (210), Expect = 4.600e-13 Identity = 80/317 (25.24%), Postives = 121/317 (38.17%), Query Frame = 0 Query: 207 YLSLVSFLETGTWEEEEEEKSITFKGEWGSWNEYYNLSTSSLNGNEVCDCYRE--GSRPPYVENRYYTNEEKDLRVTFIGWFG----------------------DLAPRGH------------------------------ALP------------SSSPPTRESLGCSPGGCRGPFNWKVPSIASFLQGSFLRDTLRPTTLLLNTGLWKELDES-ELKAITAAAKNLTVSKPVEVFWKTTTSSSLKATWVNDSSPRSAFIANGMKVFDSSLFT---QALRPSLPAYRD-----GTTHFVPSVYRGLNLLLFNEIC 449 Y++LV+FLE G W + + + + +W + +Y + + NG E CDCYRE R +ENRYY NE D+ VTF WF D AP+ + A+P +SS P+R+ GC PG C +W F + L P L+ N+G W L + +L+ + +A V +KTTT + + + + F G+ + D+ T AL L + + HF VY GLN +L N +C Sbjct: 188 YVNLVNFLENGVWGGPDPQ--LENECQWKGYQRFYQGTNARFNGRETCDCYREEPADRRGNIENRYYHNEVLDVWVTFFLWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSVRSDASAMPLTSTLHLLEEKEASSIPSRQR-GCEPGACDQEPHWVHDVYGLFTN---VVPLLNPDVLVFNSGHWGRLPGAYDLERLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDRLHFYAPVYAGLNKVLLNYLC 498
BLAST of NO13G03360 vs. NCBI_GenBank
Match: PRW39195.1 (hypothetical protein C2E21_6907 [Chlorella sorokiniana]) HSP 1 Score: 83.6 bits (205), Expect = 1.700e-12 Identity = 76/270 (28.15%), Postives = 108/270 (40.00%), Query Frame = 0 Query: 207 YLSLVSFLETGTWE----EEEEEKSITFKGEWGSWNEYYNLSTSSLNGNEVCDCYREGS--------------RPP---YVENRYYTNEEKDLRVTFIGWFGDLAPRGHALPSSSPPTRESLGCSPGGCRGPFNWKVPSIASFLQGSFLRDTLRPTTLLLNTGLW---KELDESELKAITAAAKNLTVSKPVEVFWKTTTSSSLKATWVNDSSPRSA--FIANGMKVFDSSLFTQALRPSLPAYRD--GTTHFVPSVYRGLNLLLFNEIC 449 YL+L+ FL+ W + + S+ + EW SWN + ++ G E+CDCYRE +PP ENR+Y +L V+ F H P C P C+ +W +A L+ ++PT L+LN+GLW + + I A + ++ V W+TTT+S KA D + A G V D+ T L LP R HF VYR LN L N IC Sbjct: 120 YLTLLHFLDRRQWPHPSGNQPGQPSVANEHEWPSWNAFLRGTSRLFGGRELCDCYREDLFQYFDPRFRRFVTWKPPEEEKFENRHY--RSGNLSVSHF-TFTTEPNTVHGHFGFPPYENGRKACKPAACKAAADWSY-HLADALRKPVA--AMQPTYLVLNSGLWGSSSAFGDKAWREIARAGRAAVAAQQGRVIWRTTTASLGKAAVGRDHDTLALQHTTAAGWGVLDAWAITNPLLQLLPGARPMWDPRHFTAVVYRELNQYLLNMIC 383
BLAST of NO13G03360 vs. NCBI_GenBank
Match: XP_005852543.1 (hypothetical protein NGA_0704500, partial [Nannochloropsis gaditana CCMP526] >EKU23288.1 hypothetical protein NGA_0704500, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 76.3 bits (186), Expect = 2.800e-10 Identity = 43/104 (41.35%), Postives = 55/104 (52.88%), Query Frame = 0 Query: 207 YLSLVSFLETGTWEEEEEEKSITFKGEWGSWNEYYNLSTSSLNGNEVCDCYRE--GSRPPYVENRYYTNEEKDLRVTFIGWFGD-LAPRGHALP---SSSPPTR 305 YL+LV+FLE G W + + F +W W +Y + + NG E+CDCYRE R +ENRYY NE D+ VTF WF +GH L S PP R Sbjct: 15 YLNLVNFLENGVWGGPDPQLENEF--QWKGWLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWFNPACGHQGHNLTWLNVSVPPPR 116
BLAST of NO13G03360 vs. NCBI_GenBank
Match: XP_005849620.1 (hypothetical protein CHLNCDRAFT_143111 [Chlorella variabilis] >EFN57518.1 hypothetical protein CHLNCDRAFT_143111 [Chlorella variabilis]) HSP 1 Score: 73.6 bits (179), Expect = 1.800e-9 Identity = 71/275 (25.82%), Postives = 109/275 (39.64%), Query Frame = 0 Query: 207 YLSLVSFLETGTWEEEEEEKSITFKGEWGSWN--------------EYYNLSTSSLNGNEVCDCYREGSRPPYVENRYYTNEEKDLRVTFIGWFG---DLAPR-GHALPSSSPPTRESL------GCSPGGCRGPFNWKVPSIASFLQGSFLRDTLRPTTLLLNTGLWKE------LDESELKAITAAAKNLTVSKPVEVFWKTTTSS---SLKATWVNDSSPRSAFIANGMKVFDSSLFTQALRPSLPAYRDGTTHFVPSVYRGLNLLLFNEIC 449 YLSLVSFL+ G+W + S+ +WG+ EY ST + CDC + E+R Y +++ ++ F+ W G L GH ++ P S+ C PG C +W +P + Q + LRP +LLN GLW+ + +A+ AA + W+TTT S S+ +W D +A + V D+ + L P +H P Y LN +L N +C Sbjct: 71 YLSLVSFLDRGSWPRVSQHPSLVHLHQWGADKMLSGKKSAHKDKKLEYLRGSTDAFGSRMRCDC---SIAKDWFESRTYEHQKHNITAHFMWWRGWPEGLEGHWGHPPFLNATPCHPSICGMHGEECPPGQCSPVPDWSMPLPEALRQ---VVAQLRPAAILLNAGLWRNHFHFQPWPPAFSRAVARAAVEAVAPQRGMALWRTTTPSTRFSISRSWDGDFLGAAA-SERRLMVLDAWELGRPLLAFDPLPFFDRSHPWPEFYTELNTVLLNMLC 338
BLAST of NO13G03360 vs. NCBI_GenBank
Match: XP_005855523.1 (hypothetical protein NGA_0609000, partial [Nannochloropsis gaditana CCMP526] >EKU20835.1 hypothetical protein NGA_0609000, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 73.2 bits (178), Expect = 2.400e-9 Identity = 37/65 (56.92%), Postives = 49/65 (75.38%), Query Frame = 0 Query: 25 IVALASSLLAVMDPSALVLSHHPRDRSGGPGDTSPFLVLHQQPRYSPLSVTMEH-PHSDEQRKKK 89 +V LASSLLAVMDPSAL+L+ H +D G G ++PFL+ HQ+PRY+PL V H P +D +R+KK Sbjct: 1 MVTLASSLLAVMDPSALILTRHMKDGGSGSGTSTPFLLRHQEPRYAPLRVPDAHLPETDPRRRKK 65 The following BLAST results are available for this feature:
BLAST of NO13G03360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G03360 ID=NO13G03360|Name=NO13G03360|organism=Nannochloropsis oceanica|type=gene|length=2903bpback to top protein sequence of NO13G03360.1 >NO13G03360.1-protein ID=NO13G03360.1-protein|Name=NO13G03360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=449bpback to top Synonyms
Publications
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