NO13G03330, NO13G03330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G03330 vs. NCBI_GenBank
Match: XP_005854006.1 (hypothetical protein NGA_0496200 [Nannochloropsis gaditana CCMP526] >EKU22355.1 hypothetical protein NGA_0496200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 284.6 bits (727), Expect = 4.600e-73 Identity = 171/366 (46.72%), Postives = 197/366 (53.83%), Query Frame = 0 Query: 79 EEKTVSFMTQEK----------------ETNAFDEEIRATGTPAYMLTLFPYVDTINWAINFPMYLLFVACVCYTVTLAVQGHPFTWQEVTFAFCHAYWRAIMSWGLLHRLFSHQAWAC--------------SRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHPFEKRVDWAFVHPHYKTWEMALVESCTWLVPALEILIRYYIWDLNNVLLHINFTGMWVLITLMLNFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTIDLLAELDHVDHHLYPRKAKRDSYMGIDVFYWTFLWPG-------------EKLGIFWDVRSDAKGRVVK 402 EEK+ SFM Q K ET+AFDE+IR+TGTP+Y+L LFPYVDT NW +NFPM+LL A + L GH TW+ V FAFCHAYWRAIM WGLLHR FSHQ + R +T L + S GP + + E EG P H+ R +T + S + L R + G+W+ ITL LNFKGHDDGKPSEPPA +GRYKCNAVPI+ WYLA TIDLLAELDHVDHHLYPRKAKR SYMG+DVFYWTFLWPG EKLGIFWDVRSDAKGR+ K Sbjct: 91 EEKSTSFMVQGKFYFPATRPFLLSSSSQETDAFDEDIRSTGTPSYLLCLFPYVDTFNWLLNFPMFLLLAASLSAQFLLTWYGHGPTWKGVLFAFCHAYWRAIMGWGLLHRFFSHQVPSLXXXXXXXXXXXLHPRRLSTLLRPVVS------GP--HTIIESSSAQDAEAEGLVPMNPSHTGRR-----------------------------RTRARGGLTSFS--------LARLF-----------GPQGLWLFITLTLNFKGHDDGKPSEPPAPDGRYKCNAVPINQWYLAYTIDLLAELDHVDHHLYPRKAKRSSYMGMDVFYWTFLWPGGNKRREGGGQGGREKLGIFWDVRSDAKGRMAK 400
BLAST of NO13G03330 vs. NCBI_GenBank
Match: XP_002286531.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96172.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 119.8 bits (299), Expect = 2.000e-23 Identity = 75/234 (32.05%), Postives = 116/234 (49.57%), Query Frame = 0 Query: 170 LHRLFSHQAWACSRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHPFEKRVDWAFVHPHYKTWEMALVESCTWLVPALEILIRYYIWDLNNVLLHINFTGMWV--LITLMLNFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTIDLL--------AELDHVDHHLYPRKAKRDSYMGIDVFYWTFLWPGEKLGIFWDVRS 394 LHR +H A+ C LL L C A Q GP+WW+S+H HHKYCE E DPHS ++ ++ F V+ F H W + +V++ +++VP E++ Y+ + L I++T +W+ ITL N H P + Y + P +++ + + LL E+ H DHH +P AKRDS D+ Y+ F++P EKLG+ WDV++ Sbjct: 169 LHRYAAHAAFKCGPAVQLLLNLLGCAANQGGPIWWASQHRCHHKYCELER-----DPHSALQVG----TEKAFSFFVFNPEVEEEFAPRHNDCWYLRIVDTWSFVVPIGEMMAAYHFFGREG--LFISYTSLWLCECITLWFNIANHPANAPVK--GVCKAYCERSRPEEMYPAFQLLHLLHPFLGYFAGEIGHDDHHDHPMLAKRDS---TDLGYYLFIFPLEKLGLVWDVKT 386
BLAST of NO13G03330 vs. NCBI_GenBank
Match: YP_002296260.1 (putative membrane protein [Emiliania huxleyi virus 86]) HSP 1 Score: 117.1 bits (292), Expect = 1.300e-22 Identity = 82/225 (36.44%), Postives = 117/225 (52.00%), Query Frame = 0 Query: 170 LHRLFSHQAWACSRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHPFEKRVDWAFVHPHYKTWEMALVESCTWLVPALEILIRY-YIWDLNNVLLHINFTGMWVLITLMLNFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTI-DLLAELDHVDHHLYPRKAKRDSYMGI---DVFYWTFLWPGEKLGIFW 390 LHR FSH A+ SR +LGLFS A Q GP+WW+SKH RHHK+C+N P+ DPHS + NFFY+++GWTI E+ +D FV E+ L++ +++P I Y YI +L + ITL+ N + H + S P KC A+ AR + D + E H HH++P + R S +GI D+ Y+ +L P G+ W Sbjct: 26 LHRYFSHSAYKTSRLFQCVLGLFSTLAYQGGPIWWASKHRRHHKHCDN--PH---DPHSVVQ-TNFFYSFVGWTIMKKEQSIDTEFVQKFMTFPELVLIDRFWYMIPWTIWTISYMYIGSYATCVLFVAPMLGCRFITLLFNVEYHTPNRHSIPG------KCLALD-----TARFLGDCVGESGHARHHIHPSELVRPS-LGIPYFDIPYYIYLKPLMYTGLIW 232
BLAST of NO13G03330 vs. NCBI_GenBank
Match: YP_294173.1 (putative fatty acid desaturase [Emiliania huxleyi virus 86] >CAI65842.1 putative fatty acid desaturase [Emiliania huxleyi virus 86] >AEO97952.1 delta 9 acyl-lipid fatty acid desaturase [Emiliania huxleyi virus 84] >AEP15130.1 fatty acid desaturase [Emiliania huxleyi virus 88] >AHA55032.1 putative fatty acid desaturase [Emiliania huxleyi virus 145] >AHA56041.1 putative fatty acid desaturase [Emiliania huxleyi virus 164]) HSP 1 Score: 117.1 bits (292), Expect = 1.300e-22 Identity = 82/225 (36.44%), Postives = 117/225 (52.00%), Query Frame = 0 Query: 170 LHRLFSHQAWACSRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHPFEKRVDWAFVHPHYKTWEMALVESCTWLVPALEILIRY-YIWDLNNVLLHINFTGMWVLITLMLNFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTI-DLLAELDHVDHHLYPRKAKRDSYMGI---DVFYWTFLWPGEKLGIFW 390 LHR FSH A+ SR +LGLFS A Q GP+WW+SKH RHHK+C+N P+ DPHS + NFFY+++GWTI E+ +D FV E+ L++ +++P I Y YI +L + ITL+ N + H + S P KC A+ AR + D + E H HH++P + R S +GI D+ Y+ +L P G+ W Sbjct: 52 LHRYFSHSAYKTSRLFQCVLGLFSTLAYQGGPIWWASKHRRHHKHCDN--PH---DPHSVVQ-TNFFYSFVGWTIMKKEQSIDTEFVQKFMTFPELVLIDRFWYMIPWTIWTISYMYIGSYATCVLFVAPMLGCRFITLLFNVEYHTPNRHSIPG------KCLALD-----TARFLGDCVGESGHARHHIHPSELVRPS-LGIPYFDIPYYIYLKPLMYTGLIW 258
BLAST of NO13G03330 vs. NCBI_GenBank
Match: AEO98365.1 (fatty acid desaturase [Emiliania huxleyi virus 203] >AEP15471.1 fatty acid desaturase [Emiliania huxleyi virus 207] >AEP15895.1 fatty acid desaturase [Emiliania huxleyi virus 208] >AET98124.1 fatty-acid desaturase [Emiliania huxleyi virus 201]) HSP 1 Score: 115.9 bits (289), Expect = 2.900e-22 Identity = 95/271 (35.06%), Postives = 133/271 (49.08%), Query Frame = 0 Query: 124 FPMYLLFVACVCYTVTLAVQGHPFTWQEVTFAFCHAYWRAIMSWGLLHRLFSHQAWACSRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHPFEKRVDWAFVHPHYKTWEMALVESCTWLVPALEILIRY-YIWDLNNVLLHINFTGMWVLITLMLNFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTI-DLLAELDHVDHHLYPRKAKRDSYMGIDVF---YWTFLWPGEKLGIFW 390 FP+ LLF Y + +Q FT +FA MS LHR FSH A+ SR +LGLFS A Q GP+WW+SKH RHHK+C+N P+ DPHS + NFFY+++GWTI E+ +D FV E+ L++ +++P I Y YI +L + ITL+ N + H + S P KC A+ AR + D + E H HH++P + R S +GI F Y+ +L P G+ W Sbjct: 13 FPITLLFNLFCVYGLPSILQF--FT----SFALIMVLTGTAMS-ATLHRYFSHSAYKTSRLFQCVLGLFSTLAYQGGPIWWASKHRRHHKHCDN--PH---DPHSVVQ-TNFFYSFVGWTIMKKEQSIDTEFVQKFMTFPELVLIDRFWYMIPWTIWTISYMYIGSYTTCVLFVAPMLGCRFITLLFNVEYHTPNRHSIPG------KCLALD-----TARFLGDCVGESGHARHHIHPSELARPS-LGIPYFDLPYYIYLKPLIYTGLIW 258
BLAST of NO13G03330 vs. NCBI_GenBank
Match: CAZ69746.1 (putative fatty acid desaturase [Emiliania huxleyi virus 99B1]) HSP 1 Score: 115.2 bits (287), Expect = 4.900e-22 Identity = 95/271 (35.06%), Postives = 133/271 (49.08%), Query Frame = 0 Query: 124 FPMYLLFVACVCYTVTLAVQGHPFTWQEVTFAFCHAYWRAIMSWGLLHRLFSHQAWACSRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHPFEKRVDWAFVHPHYKTWEMALVESCTWLVPALEILIRY-YIWDLNNVLLHINFTGMWVLITLMLNFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTI-DLLAELDHVDHHLYPRKAKRDSYMGIDVF---YWTFLWPGEKLGIFW 390 FP+ LLF Y + +Q FT +FA MS LHR FSH A+ SR +LGLFS A Q GP+WW+SKH RHHK+C++ PY DPHS + NFFY+++GWTI E+ +D FV E+ L++ +++P I Y YI +L + ITL+ N + H + S P KC A+ AR + D + E H HH++P + R S +GI F Y+ +L P G+ W Sbjct: 13 FPITLLFSLFCVYGLPSILQ--VFT----SFALIMVLTGTAMS-ATLHRYFSHSAYKTSRLFQCVLGLFSTLAYQGGPIWWASKHRRHHKHCDD--PY---DPHSVVQ-TNFFYSFVGWTIMKKEQPIDTEFVQKFMTFPELVLIDRFWYMIPWTIWTISYMYIGSYVTCVLFVAPMLGCRFITLLFNVEYHTPNRHSIPG------KCLALD-----TARFLGDCVGESGHARHHIHPSELARPS-LGIPYFDLPYYIYLKPLIYTGLIW 258
BLAST of NO13G03330 vs. NCBI_GenBank
Match: AET42565.1 (fatty acid desaturase [Emiliania huxleyi virus 202]) HSP 1 Score: 113.6 bits (283), Expect = 1.400e-21 Identity = 77/225 (34.22%), Postives = 118/225 (52.44%), Query Frame = 0 Query: 170 LHRLFSHQAWACSRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHPFEKRVDWAFVHPHYKTWEMALVESCTWLVP-ALEILIRYYIWDLNNVLLHINFTGMWVLITLMLNFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTI-DLLAELDHVDHHLYPRKAKRDSYMG---IDVFYWTFLWPGEKLGIFW 390 LHR FSH A+ +R F+L +FS A Q GP+WW+SKH RHHK+C++ DPHS + NFFYA++GWT+ E++++ FV E+ L++ ++ P + + +Y+ N +L I LITL+ N + H + S P KC A+ AR + D + E H HH++P + R S +G D+ Y+ +L P LG+ W Sbjct: 89 LHRYFSHSAYKTNRAFQFVLAIFSTLAYQGGPIWWASKHRRHHKHCDDPN-----DPHSVVQ-SNFFYAFVGWTMMKSEQQINTEFVGKFMTYPELVLIDKFWYVFPWSCWAISLFYLGYYNTCVLFIAPMLGCRLITLLFNVEYHTPNRNSIPG------KCLALD-----TARFLGDCVGESGHARHHIHPSEIVRQS-LGPPYFDLPYYLYLKPLLLLGLIW 295
BLAST of NO13G03330 vs. NCBI_GenBank
Match: AHA54166.1 (putative fatty acid desaturase [Emiliania huxleyi virus 18] >AHA55212.1 putative fatty acid desaturase [Emiliania huxleyi virus 156]) HSP 1 Score: 113.6 bits (283), Expect = 1.400e-21 Identity = 77/225 (34.22%), Postives = 118/225 (52.44%), Query Frame = 0 Query: 170 LHRLFSHQAWACSRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHPFEKRVDWAFVHPHYKTWEMALVESCTWLVP-ALEILIRYYIWDLNNVLLHINFTGMWVLITLMLNFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTI-DLLAELDHVDHHLYPRKAKRDSYMG---IDVFYWTFLWPGEKLGIFW 390 LHR FSH A+ +R F+L +FS A Q GP+WW+SKH RHHK+C++ DPHS + NFFYA++GWT+ E++++ FV E+ L++ ++ P + + +Y+ N +L I LITL+ N + H + S P KC A+ AR + D + E H HH++P + R S +G D+ Y+ +L P LG+ W Sbjct: 52 LHRYFSHSAYKTNRAFQFVLAIFSTLAYQGGPIWWASKHRRHHKHCDDPN-----DPHSVVQ-SNFFYAFVGWTMMKSEQQINTEFVGKFMTYPELVLIDKFWYVFPWSCWAISLFYLGYYNTCVLFIAPMLGCRLITLLFNVEYHTPNRNSIPG------KCLALD-----TARFLGDCVGESGHARHHIHPSEIVRQS-LGPPYFDLPYYLYLKPLLLLGLIW 258
BLAST of NO13G03330 vs. NCBI_GenBank
Match: OEU11003.1 (hypothetical protein FRACYDRAFT_270903 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 105.5 bits (262), Expect = 3.900e-19 Identity = 81/296 (27.36%), Postives = 126/296 (42.57%), Query Frame = 0 Query: 171 HRLFSHQAWACSRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHPFEKRVDWAFVHP-----------------------------HYKTW-----------------------------EMALVESCTWLVPALEI-LIRYYI--WDLNNVLLHINFTGMWVLITLML-NFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTIDLLAELDHVDHHLYPRKAKRDSYMGIDVFYWTFLWPGEKLGIFWDVRSDAKGRVVKKQL 405 HR F+H A+ SR T + + +C Q GP WWSSKH RHHK+C+ + DPHS+ R + +YA+LGW + E+ +D +VHP W EM L++ W VP++ + L YYI + ++ L+ WV I ++L N H P + P + G Y +++ L L+ E H DHH +P +AKR +D+ YW F+ P LG+ WD ++ G + + ++ Sbjct: 27 HRFFAHNAFKVSRVTRVGVAIVACLGLQYGPCWWSSKHRRHHKHCDVDD-----DPHSWMR-TSIWYAWLGWPMAYKEQCIDTEYVHPSMFVDAFTXXXXXXXXXXXXXXXXXXPTFRLPQWLMPPQSIDDTDSDIDIDEKFDGRKKVLAPEMLLMDK-LWWVPSVSLQLGLYYIMGFPARSIFLYYTAPVTWVPIPILLFNVMFH---PPDQTPTSKGCYALDSL------LDPLTFLMGESHHEDHHAFPDRAKRPQL--LDLSYWLFIAPMLALGLAWDPKTYNHGAIKRSKV 304
BLAST of NO13G03330 vs. NCBI_GenBank
Match: WP_021279097.1 (stearoyl-CoA 9-desaturase [Bacteriovorax sp. DB6_IX] >EQC44156.1 stearoyl-CoA 9-desaturase [Bacteriovorax sp. DB6_IX]) HSP 1 Score: 96.3 bits (238), Expect = 2.300e-16 Identity = 72/245 (29.39%), Postives = 116/245 (47.35%), Query Frame = 0 Query: 171 HRLFSHQAWACSRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHPFEKRVDWAFV-----HPHY----KTWEMALVESCTWLVPALEILIRYY-----------IW-DLNNVLLHINFTGMWVLITLMLNFKGHDDG-KPSEPPAANGRYKCNAVPIDVWYLARTIDLLAELDHVDHHLYPRKAKRD-SYMGIDVFYWTFLWPGEKLGIFWDVR 393 HR F+H+A+ +RF F+L L+ AQRGPLWW+SKH +HH++C+ G DPHS H++ + ++GW + + D A V +P K ++ ++ L + E++ YY IW + N L+H++ +T +N GH G +P + K +P W A E H +HH +P A+ + +D+ Y T L EK+G+ WDV+ Sbjct: 48 HRYFAHRAFKTTRFFQFILALWGGLCAQRGPLWWASKHRKHHRHCDLPG-----DPHSPHQL-GLWGGHIGWALKAESMKTDEALVKDFKKYPELMIFNKYHDLFMLSFAALLYLSGELIAHYYPQSGTSGFQILIWVYIINTLVHVH-------LTFCVNSIGHVRGSRPFKDHQCEKGDKSGNIPWLAWLTA------GEGWHHNHHTFPYSARIGIQWFELDLGYLTILLL-EKMGLIWDVK 272 The following BLAST results are available for this feature:
BLAST of NO13G03330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G03330 ID=NO13G03330|Name=NO13G03330|organism=Nannochloropsis oceanica|type=gene|length=3481bpback to top protein sequence of NO13G03330.1 >NO13G03330.1-protein ID=NO13G03330.1-protein|Name=NO13G03330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=405bpback to top Synonyms
Publications
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