NO13G03320, NO13G03320 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G03320 vs. NCBI_GenBank
Match: XP_024580746.1 (ctl-like protein ddb_g0274487-like [Plasmopara halstedii] >CEG44377.1 ctl-like protein ddb_g0274487-like [Plasmopara halstedii]) HSP 1 Score: 94.0 bits (232), Expect = 2.100e-15 Identity = 77/252 (30.56%), Postives = 114/252 (45.24%), Query Frame = 0 Query: 482 SSSNLSGEVLLHHLACALSVSLGSLCQAAFCCPLAHALWAWQGYTVSHQDSDMHTMPTAV--SHRPTSHSFVPSASLASTLPSHAASRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIRTHHPLALVHVAAYKKSFSTAARDVWTLLVAAGLDSILRTDALSHTLHALGT-TAGCLTALMSLLLFGASAGVGVAVVLPGALAYILVMTALEPLLATVNAAYVSFAETPALVSQTFPLIFHRLDRIAEVRNF 731 S+ NL +V+LH++ CA+S S GS+C + CP+AH LW TA+ + R S SL S H FIRT+H + VH+AAY K + AA D W L+ G+++I+ D S L G AG ++AL++ L GAS+ + L Y + A + + A + +V FAE P +SQ PLI+HR R+AE+++F Sbjct: 329 STKNLDRKVVLHYVRCAISSSFGSICIGSLLCPIAHLLW------------------TALRWARRDESALLRRFISLRSERVEH---------------------------------FIRTYHKFSFVHIAAYNKPYYVAAHDAWELIEQHGVEAIVDDDLTSRILLLGGNGWAGIMSALVASALAGASSHAIFFTLAAFTLCYTTMSLATQAIAAVIKTLFVCFAENPGRLSQLQPLIYHRFVRLAELKSF 529
BLAST of NO13G03320 vs. NCBI_GenBank
Match: XP_008903071.1 (hypothetical protein PPTG_10193 [Phytophthora parasitica INRA-310] >ETI50949.1 hypothetical protein F443_05579 [Phytophthora parasitica P1569] >ETK90845.1 hypothetical protein L915_05444 [Phytophthora parasitica] >ETL44256.1 hypothetical protein L916_05390 [Phytophthora parasitica] >ETL97423.1 hypothetical protein L917_05279 [Phytophthora parasitica] >ETM50580.1 hypothetical protein L914_05396 [Phytophthora parasitica] >ETN11254.1 hypothetical protein PPTG_10193 [Phytophthora parasitica INRA-310] >ETO79703.1 hypothetical protein F444_05630 [Phytophthora parasitica P1976] >ETP20716.1 hypothetical protein F441_05593 [Phytophthora parasitica CJ01A1] >ETP48659.1 hypothetical protein F442_05625 [Phytophthora parasitica P10297] >KUF64361.1 PNS1 protein [Phytophthora nicotianae] >KUF91149.1 IQ domain-containing protein G [Phytophthora nicotianae]) HSP 1 Score: 91.7 bits (226), Expect = 1.000e-14 Identity = 75/250 (30.00%), Postives = 112/250 (44.80%), Query Frame = 0 Query: 482 SSSNLSGEVLLHHLACALSVSLGSLCQAAFCCPLAHALWAWQGYTVSHQDSDMHTMPTAVSHRPTSHSFVPSASLASTLPSHAASRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIRTHHPLALVHVAAYKKSFSTAARDVWTLLVAAGLDSILRTDALSHTLHALGT-TAGCLTALMSLLLFGASAGVGVAVVLPGALAYILVMTALEPLLATVNAAYVSFAETPALVSQTFPLIFHRLDRIAEVRNF 731 S+ L +V+LH+ CA+S S GS+C + CPLAH + W + +D + S F+ SL S H FIRT+H A VH+A Y K + AA D W L+ G+++I+ D S L G AG ++AL + L GAS+ ++ L Y + A + + A + +V FAE P +SQ PLI+HR R+AE+++F Sbjct: 342 STDYLDRKVVLHYARCAMSSSFGSICIGSLLCPLAHLV--WNALRWARRDESI-----------LSRRFM---SLRSERVEH---------------------------------FIRTYHKYAFVHIAGYNKPYYVAAHDAWKLIEHHGVEAIVDDDLTSRILLFGGNGWAGVMSALTASALAGASSHATFFTLVAFTLCYTTISLATQVIAAVIKTLFVCFAENPGRLSQLHPLIYHRFVRLAELKSF 542
BLAST of NO13G03320 vs. NCBI_GenBank
Match: XP_009514545.1 (hypothetical protein PHYSODRAFT_343563 [Phytophthora sojae] >EGZ27270.1 hypothetical protein PHYSODRAFT_343563 [Phytophthora sojae]) HSP 1 Score: 89.4 bits (220), Expect = 5.200e-14 Identity = 72/246 (29.27%), Postives = 110/246 (44.72%), Query Frame = 0 Query: 486 LSGEVLLHHLACALSVSLGSLCQAAFCCPLAHALWAWQGYTVSHQDSDMHTMPTAVSHRPTSHSFVPSASLASTLPSHAASRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIRTHHPLALVHVAAYKKSFSTAARDVWTLLVAAGLDSILRTDALSHTLHALGT-TAGCLTALMSLLLFGASAGVGVAVVLPGALAYILVMTALEPLLATVNAAYVSFAETPALVSQTFPLIFHRLDRIAEVRNF 731 L +V+LH+ CA++ S GS+C + CPLAH + W + +D + S F+ SL S H FIRT+H + VH+A Y K++ AA+D W L+ G+++I+ D S L G AG ++AL + L GAS + L Y + A + + A + +V FAE P +SQ PLI+HR R+AE+++F Sbjct: 346 LDRKVVLHYARCAMTSSFGSICIGSLLCPLAHLV--WNALRWARRDESV-----------LSRRFI---SLRSERVEH---------------------------------FIRTYHKYSFVHIAGYNKTYYVAAQDAWRLIEHHGVEAIVDDDLTSRILLLGGNGWAGVMSALTASALAGASTHATFFTLTAFTLCYTTISLATQVIAAVIKTLFVCFAENPGRLSQLHPLIYHRFVRLAELKSF 542
BLAST of NO13G03320 vs. NCBI_GenBank
Match: XP_002895956.1 (transmembrane protein, putative [Phytophthora infestans T30-4] >EEY54087.1 transmembrane protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 87.0 bits (214), Expect = 2.600e-13 Identity = 73/250 (29.20%), Postives = 110/250 (44.00%), Query Frame = 0 Query: 482 SSSNLSGEVLLHHLACALSVSLGSLCQAAFCCPLAHALWAWQGYTVSHQDSDMHTMPTAVSHRPTSHSFVPSASLASTLPSHAASRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIRTHHPLALVHVAAYKKSFSTAARDVWTLLVAAGLDSILRTDALSHTLHALGT-TAGCLTALMSLLLFGASAGVGVAVVLPGALAYILVMTALEPLLATVNAAYVSFAETPALVSQTFPLIFHRLDRIAEVRNF 731 S+ L V+LH+ CA+S S GS+C + CPLAH + W + +D + S F+ +L S H FIRT+H + VH+A Y K + AA D W L+ G+++I+ D S L G AG ++AL + L GAS+ + L Y + A + + A + +V FAE P +SQ PLI+HR R+AE+++F Sbjct: 344 STDYLDRTVVLHYARCAMSSSFGSVCIGSLLCPLAHLV--WNALRWARRDESV-----------LSRRFM---ALRSERVEH---------------------------------FIRTYHKYSFVHIAGYNKPYYVAAHDAWKLIEHHGVEAIVDDDLTSRILLLGGNGWAGVMSALTASALAGASSHAIFFTLASFTLCYTTISLATQVIAAVIKTLFVCFAENPGRLSQLHPLIYHRFVRLAELKSF 544
BLAST of NO13G03320 vs. NCBI_GenBank
Match: OWZ01472.1 (Transmembrane protein [Phytophthora megakarya]) HSP 1 Score: 85.5 bits (210), Expect = 7.500e-13 Identity = 72/243 (29.63%), Postives = 108/243 (44.44%), Query Frame = 0 Query: 489 EVLLHHLACALSVSLGSLCQAAFCCPLAHALWAWQGYTVSHQDSDMHTMPTAVSHRPTSHSFVPSASLASTLPSHAASRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIRTHHPLALVHVAAYKKSFSTAARDVWTLLVAAGLDSILRTDALSHTLHALGT-TAGCLTALMSLLLFGASAGVGVAVVLPGALAYILVMTALEPLLATVNAAYVSFAETPALVSQTFPLIFHRLDRIAEVRNF 731 +V++H+ CA+S S GS+C + CPLAH + W + +D + +S R SL S H FIRT+H +LVH+A Y K + AA D W L+ G+++I+ D S L G AG ++AL L GAS+ + L Y + A + + A + +V FAE P +SQ PLI+HR R+AE+++F Sbjct: 340 KVVMHYARCAMSSSFGSICIGSLLCPLAHLV--WNALRWARRDE------SVLSRR--------FKSLRSERVEH---------------------------------FIRTYHKYSLVHIAGYNKPYYVAAHDAWKLIKHHGVEAIVDDDLTSRILLLGGNGWAGVMSALTVSALGGASSYTIFFTLTAFTLCYTTISLATQVIAAVIKTLFVCFAENPGRLSQLHPLIYHRFVRLAELKSF 533
BLAST of NO13G03320 vs. NCBI_GenBank
Match: POM77782.1 (Transmembrane protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 78.6 bits (192), Expect = 9.100e-11 Identity = 48/135 (35.56%), Postives = 74/135 (54.81%), Query Frame = 0 Query: 597 FIRTHHPLALVHVAAYKKSFSTAARDVWTLLVAAGLDSILRTDALSHTLHALGT-TAGCLTALMSLLLFGASAGVGVAVVLPGALAYILVMTALEPLLATVNAAYVSFAETPALVSQTFPLIFHRLDRIAEVRNF 731 FIRT+H + VH+A Y K + AA D W L+ G+++I+ D S L G AG ++AL + L G+S+ + L Y + A + + A + +V FAE P +SQ PLI+HR R+AE+++F Sbjct: 11 FIRTYHKYSFVHIAGYNKPYYVAAHDAWKLIEHHGVEAIVDDDLTSRILLLGGNGWAGVMSALTASALAGSSSHATFFTLAAFTLCYTTISLATQVIAAVIKTLFVCFAENPGRLSQLHPLIYHRFVRLAELKSF 145
BLAST of NO13G03320 vs. NCBI_GenBank
Match: GAX22975.1 (hypothetical protein FisN_15Hh130 [Fistulifera solaris]) HSP 1 Score: 73.9 bits (180), Expect = 2.200e-9 Identity = 48/139 (34.53%), Postives = 77/139 (55.40%), Query Frame = 0 Query: 597 FIRTHHPLALVHVAAYKKSFSTAARDVWTLLVAAGLDSILRTDALSHTLHAL-GTTAGCLTALMSLLLFG---------ASAGVGVAVVLPGALAYILVMTALEPLLATVNAAYVSFAETPALVSQTFPLIFHRLDRIA 726 F+R LA+ HVA + KS+ AA DV TL+ +G++ IL D +H + G +G + + LLL + A V ++ +Y ++ T +EPL A++ A YVSFA+ P +S+ FP+I+HRL R++ Sbjct: 525 FVRRFSDLAMCHVALFYKSYQRAALDVATLVEESGVEPILHDDISTHMCACVGGAISGIIVIISGLLLLHQRKNFDPPISDAQVVTNMIAAFVFSYTMIFTVMEPLRASIKAVYVSFAQHPESLSRAFPIIYHRLHRLS 663
BLAST of NO13G03320 vs. NCBI_GenBank
Match: GAX23409.1 (hypothetical protein FisN_15Lh130 [Fistulifera solaris]) HSP 1 Score: 72.8 bits (177), Expect = 5.000e-9 Identity = 47/139 (33.81%), Postives = 77/139 (55.40%), Query Frame = 0 Query: 597 FIRTHHPLALVHVAAYKKSFSTAARDVWTLLVAAGLDSILRTDALSHTLHAL-GTTAGCLTALMSLLLFG---------ASAGVGVAVVLPGALAYILVMTALEPLLATVNAAYVSFAETPALVSQTFPLIFHRLDRIA 726 F+R LA+ HVA + KS+ AA DV TL+ +G++ IL D +H + G +G + + +LL + A V ++ +Y ++ T +EPL A++ A YVSFA+ P +S+ FP+I+HRL R++ Sbjct: 525 FVRRFSDLAMCHVALFYKSYQRAALDVATLVEESGVEPILHDDISTHMCACVGGAISGIIVIISGILLLHQRKDFNPPISDAQVVTNMIAAFIFSYTMIFTVMEPLRASIKAVYVSFAQHPESLSRAFPIIYHRLHRLS 663
BLAST of NO13G03320 vs. NCBI_GenBank
Match: XP_008608181.1 (hypothetical protein SDRG_04292 [Saprolegnia diclina VS20] >EQC38589.1 hypothetical protein SDRG_04292 [Saprolegnia diclina VS20]) HSP 1 Score: 72.4 bits (176), Expect = 6.500e-9 Identity = 66/242 (27.27%), Postives = 104/242 (42.98%), Query Frame = 0 Query: 490 VLLHHLACALSVSLGSLCQAAFCCPLAHALWAWQGYTVSHQDSDMHTMPTAVSHRPTSHSFVPSASLASTLPSHAASRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIRTHHPLALVHVAAYKKSFSTAARDVWTLLVAAGLDSILRTDALSH-TLHALGTTAGCLTALMSLLLFGASAGVGVAVVLPGALAYILVMTALEPLLATVNAAYVSFAETPALVSQTFPLIFHRLDRIAEVRNF 731 ++LH+ A++ GS+C A C P+AH W ++ R S+ ++ L A F + +H L +VAAY +SF AA +VW+L G+++++ D S L A + AGC+ L SL+LFG+ V VL + Y + TA L V +V FA+ P +SQ P+I+HR R++E++NF Sbjct: 299 IVLHYTRVAMTSVFGSVCLGALCSPIAHFFWT----------------VLRMAKRDGSYRWLRGVVLPLAPRIDA--------------------------------FTQLYHKYTLSYVAAYSQSFYVAAAEVWSLFEECGIEAMVDDDLTSRLLLFAANSGAGCMGTLASLVLFGSHLQV-YGTVLSFVVGYSVSSTATAMLNTAVKTLFVCFAQNPDRLSQLNPIIYHRYVRLSELKNF 491
BLAST of NO13G03320 vs. NCBI_GenBank
Match: XP_012201507.1 (hypothetical protein SPRG_07327 [Saprolegnia parasitica CBS 223.65] >KDO27698.1 hypothetical protein SPRG_07327 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 72.4 bits (176), Expect = 6.500e-9 Identity = 66/242 (27.27%), Postives = 104/242 (42.98%), Query Frame = 0 Query: 490 VLLHHLACALSVSLGSLCQAAFCCPLAHALWAWQGYTVSHQDSDMHTMPTAVSHRPTSHSFVPSASLASTLPSHAASRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIRTHHPLALVHVAAYKKSFSTAARDVWTLLVAAGLDSILRTDALSH-TLHALGTTAGCLTALMSLLLFGASAGVGVAVVLPGALAYILVMTALEPLLATVNAAYVSFAETPALVSQTFPLIFHRLDRIAEVRNF 731 ++LH+ A++ GS+C A C P+AH W ++ R S+ ++ L A F + +H L +VAAY +SF AA +VW+L G+++++ D S L A + AGC+ L SL+LFG+ V VL + Y + TA L V +V FA+ P +SQ P+I+HR R++E++NF Sbjct: 260 IVLHYTRVAMTSVFGSVCLGALCSPIAHFFWT----------------VLRMAKRDGSYRWLRGVVLPLAPRIDA--------------------------------FTQLYHKYTLSYVAAYSQSFYVAAAEVWSLFEECGIEAMVDDDLTSRLLLFAANSGAGCMGTLASLVLFGSHLQV-YGTVLSFVVGYSVSSTATAMLNTAVKTLFVCFAQNPDRLSQLNPIIYHRYVRLSELKNF 452 The following BLAST results are available for this feature:
BLAST of NO13G03320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 14
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G03320 ID=NO13G03320|Name=NO13G03320|organism=Nannochloropsis oceanica|type=gene|length=2193bpback to top protein sequence of NO13G03320.1 >NO13G03320.1-protein ID=NO13G03320.1-protein|Name=NO13G03320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=731bpback to top Synonyms
Publications
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