NO13G03310, NO13G03310 (gene) Nannochloropsis oceanica

Overview
NameNO13G03310
Unique NameNO13G03310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4032
Alignment locationchr13:976421..980452 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:976421..980452 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO13G03310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL130nonsL130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR048ncniR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR096ngnoR096Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G03310.2NO13G03310.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO13G03310.1NO13G03310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|248132gene_8969Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G03310.2NO13G03310.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO13G03310.1NO13G03310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G03310 ID=NO13G03310|Name=NO13G03310|organism=Nannochloropsis oceanica|type=gene|length=4032bp
ATGGAATATGATGTTTGTCTGGTGATTTTGTCGTTTCCTCACAGGCGGCA
GCGCCATAAGCCGCAAGGGCTGGAGCTACGCCATGCGAAGGACATAGCTA
ATTCCGGCGGTGACAAGGCCGCCTTTTCAAAATCCAAAACCCTTTGGGCT
CATGCATAGCCTCCGTATTCCTCATCGAGATATTTCAAGTGTGGCGATGG
TGCGTTGAAAGCTCTACAAAACATTAAAAACCAAAGACATGAGGGGCACA
AAAGGCCGCTGCTCCAACTGGGCACGCAAACGGCTGGGATGAGAAAGATG
GATACACTTGGGCACACCATCCACACACACTGACCCTGAACGCTCTCCCA
CATATTGACAGCAAGAATAAGAAGTGCAGTTGGATACCCCTGCGATGGTG
GAGTTGGTACGTGGGTGTCCATTTAATGATGGTGGAAATGAACGCCACCA
GGTGTTTCTCTAACCATCATCTTCGAACCAGGCACGGAGCTGAGCAAGGC
ATTCTGTACCTATGTCTTTCCCTACCTACTTGGTGCCCCTCTCTCTCTAT
TCCTTCATATTACCTGTACTTAGGGAGGGCCTGCGCCCTGGAGTGATTGG
AAATGCGACAAGAGAAAAAAGCCGGGCAGCAGCTTACCTCCCCAACCTTC
TTCCTTCCCTCCCTCCCTCCTTCCCTCCCCACCCTGATAACCTCCTCACA
GTCAATCGAAGACTTGGAGCGGATGGAGGAAGAGTATGTACAGCAGCAGC
AGCAAAAGCAGCAACAGCATCAAGAACAGAGTGGAGCCACAGCAGAAAGA
GGAGAAGGGAAAGCGACACAGAGGGGAGGGAACGAAGCGATTGCTGTCGC
TGACGAGGATGAGGACGAGGACGAGGATGAGGACGAGGACGAGGACGAGG
ACGACAGAGCCATTCACTCCACTATTTCCCCCCTAGCAGCTTTGACGGCC
GCCGCAGAGGTTGGAGGACAAAACGGAGGTGAAGAGAAGGAGGAGAGGGG
GGATGAGAGGGAGACGAAGAGACGACAGCATGACCAGCAGGGTGTGGGCG
GGGCAGATATGGAAGATTACGGAAGTAATATTCCCGTTCCTAGGGAGGTT
GAGATTCTCCTTATGAAGAAGAGGCGGGGCCGGCCACCGGGGAGTGGGAA
ATGGCAGAGGCAGCAGCAGAGGCAGCAGCAGAAGCAGCAACAGAAGCAGA
AGCAGCAGCAGGGGGAGGAAGGACGTGAGGGGAGAGGAGAAGGAAGTGGA
CTAGGAGCAGAGGCGATAGCGAAGAAGAACCGGAGGAAAGAGAAGGCGGC
CGCTGTGGAGGTGGTGGAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGC
GGGGGAAGAGAGAGAGGAGAAAAAGAGGGATGACAGAGGGCATGCTGGGG
CCCGAAAGGAGGAAGGAGGGGGAGGAGGAGGCAGAAGGGGAAGCGGAGGA
AAAGAGGAAGAAGCGGAGGAGCATGCTAAAGAGAAGAGGGCAACTAGATG
TGGAGGAGGTGGAGGAGGAGGAAGGGGAGAAAGAGGGAGGGAAGGAAGAG
GGCTCTGCGTTCTTTGCGAGCACCAGCAAGCGAGGGAGGAAGCGGGTCGT
GCCTCCTCCCTCGGTCTTTGCCCCCATCGTGGCCTCGGTCTCTGGCACCC
ACGTCTTTGCCCTGTGTCCGCCCAGCAATTTATTACGGCAGATGgtacgt
ctctccctccctccctccctccctccctccctccctccctccctccttcc
ctcatagcctcgctcccccacactcacccattttcgcctcctcccctccc
tccctccctccctccctccctccctccctccctccctcgctccttccctc
atagcctcgctcccccacactcacccattttcgcctcctcccctccctcc
ctccctccctccctccctccctccctccctccctccctccctccctcctt
ccctcatagcctcgctcccccacactcacccattttcgcctcctcccctc
cctcccctcccttccccccctcctgacagGTCAGGAACAAGGCGGGCCAC
CTCTTCCGCTCCCTTCTGCAACTATTTCCCTTCCACCCCGACTGCAGCGC
CCGTGTCCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCTCGACCCCC
ATCTCCTGACCACTCCCACGGACCTGCATGCCTTCCTTCCTCCCGCCCTC
CCTCGCCTCCTCCCCTTCGCCCTCTCCACCCTCCAAGCCCTCCTTTCGTC
CCTCCCGCGCACCGACACCAAGGGCAGGCAGGGAGGGAGGGAGGGAGGGA
GGCAGGGAAGGAGGGAGGGAGGGAGGGTGCTGGTGATGGAGGGAGCTACA
CAGCAGGAATCGACCATGTCAGTGGATGATTTCTTCTCTTACTGGACGTC
CCCGGTGGATCGATTTCATCGCACTCTGGCCTTGACCCTCAGgtgggtgc
ccttccctccctccctccctccctccctccctccctccttccctccctcc
ctcccttccttccttcctccctcccctgttgcagactcttagattgccgt
ctactctctctttctccccttgacctcttcgccttcacttccctcccacc
agccctggccaaaataaacataagagattgtctttatccacttatatcac
cctccctccctccctccctccctccctccctcccagCATTCCTCCCCCTC
GTCTTCCCTTGCCGAGCTTTCTGCCCCCCCTCAAAAGACGGGCCAAGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGGAAGAGCA
AGAGGGAGGAGAAAAAGACAAGGAGGCTAAGGCCGCAGAAGTAGCAGAAG
GAGGGAAGGAGGGCAGGGGGGAGGATGGAGTGACGAGGAAGAGGGGGAAG
AAGATAAAGGAGGACAAGAGGAAGGAAAATGAAGGAGAGGCTGATGTGCC
ACTCAAGGATCAGgtaggaagagaggaaagggagggagggagggagggag
ggagggagggagggagggagggagaaaaggaaggaaagaaggagatgatg
aggcgcaggatttacgtgcgtcggcttgcatcccaagctcctcccttcct
ccctccctttcccccccctccctccctccctccctcttagCCGTACGTGA
CGTATGCCGTTGACGGCTTCTATCTCGACTTTGCCCTCCTTCCGCCCGAG
CAAGGCCAGTGGCTCCATGTCCTCCAGGGCTCTCTCGCTTGCCTCCTCCT
CCCCCCTCCCCCTCCAACCTCCGGGTATTCAGCGCATGgtccgtgctccc
tcccctcccctccttccctccctccccccagcaccgacatggattccctc
cctccccccccctttttttacccctcccctcccttagGGACGACCATCCC
TCAACCCGACAAGAACACTTTCTCCCCCTCTTCGGCCTCGGCCGCAACGC
CCGTCACGTGGAGGAATATCAAACCACCTGCTGTATCCACAAGgtatact
tccctctctcccttgctctctcccttgctctccctccctccctccctccc
tttcagagacctccctcctcctccctccggcagggatccagctaatcaat
acctcacccccgcccctccctccttccctccctccctcccttcctccttc
atttcctcagGTCTGCGTGGAGGAAGGAGAGACCCTCCTCCTCCCGCCCG
GATGGGGCTTGGCTCTGTTTAATGAAAGGGAGACTGTGTATGTGGGAGGG
AGGTGGGAAGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGGAGCAGACAGT
GAAGGAGGAGGAAGAGGAGGGAGGGGTAGGCGAACCGGTGTGTGGATGGT
GTGAGCGCGTGAAGAAGGAGAAGGAGGGGAAATAAGGGGGGAGAGAGGGA
GGGAGGGAGGAAGGGAGGGGAAAGCAGATGTGTCAAGTAGCGCCAGAACA
AATACACAAGGAATAGTATATCAATTACACCGGTTTTGCTGCCGGAGGGC
GGAGGCCTCGCTCCTCCTCCTCCTCCTCCTCC
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protein sequence of NO13G03310.2

>NO13G03310.2-protein ID=NO13G03310.2-protein|Name=NO13G03310.2|organism=Nannochloropsis oceanica|type=polypeptide|length=726bp
MRQEKKAGQQLTSPTFFLPSLPPSLPTLITSSQSIEDLERMEEEYVQQQQ
QKQQQHQEQSGATAERGEGKATQRGGNEAIAVADEDEDEDEDEDEDEDED
DRAIHSTISPLAALTAAAEVGGQNGGEEKEERGDERETKRRQHDQQGVGG
ADMEDYGSNIPVPREVEILLMKKRRGRPPGSGKWQRQQQRQQQKQQQKQK
QQQGEEGREGRGEGSGLGAEAIAKKNRRKEKAAAVEVVEVEEEEEEEEER
GKRERRKRGMTEGMLGPERRKEGEEEAEGEAEEKRKKRRSMLKRRGQLDV
EEVEEEEGEKEGGKEEGSAFFASTSKRGRKRVVPPPSVFAPIVASVSGTH
VFALCPPSNLLRQMVRNKAGHLFRSLLQLFPFHPDCSARVPSLPPSLLPS
LLDPHLLTTPTDLHAFLPPALPRLLPFALSTLQALLSSLPRTDTKGRQGG
REGGRQGRREGGRVLVMEGATQQESTMSVDDFFSYWTSPVDRFHRTLALT
LSIPPPRLPLPSFLPPLKRRAKEGGREGGREEGREGGEEQEGGEKDKEAK
AAEVAEGGKEGRGEDGVTRKRGKKIKEDKRKENEGEADVPLKDQPYVTYA
VDGFYLDFALLPPEQGQWLHVLQGSLACLLLPPPPPTSGYSAHGTTIPQP
DKNTFSPSSASAATPVTWRNIKPPAVSTRSAWRKERPSSSRPDGAWLCLM
KGRLCMWEGGGKEGGREGRREGSRQ*
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protein sequence of NO13G03310.1

>NO13G03310.1-protein ID=NO13G03310.1-protein|Name=NO13G03310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=697bp
MVELSIEDLERMEEEYVQQQQQKQQQHQEQSGATAERGEGKATQRGGNEA
IAVADEDEDEDEDEDEDEDEDDRAIHSTISPLAALTAAAEVGGQNGGEEK
EERGDERETKRRQHDQQGVGGADMEDYGSNIPVPREVEILLMKKRRGRPP
GSGKWQRQQQRQQQKQQQKQKQQQGEEGREGRGEGSGLGAEAIAKKNRRK
EKAAAVEVVEVEEEEEEEEERGKRERRKRGMTEGMLGPERRKEGEEEAEG
EAEEKRKKRRSMLKRRGQLDVEEVEEEEGEKEGGKEEGSAFFASTSKRGR
KRVVPPPSVFAPIVASVSGTHVFALCPPSNLLRQMVRNKAGHLFRSLLQL
FPFHPDCSARVPSLPPSLLPSLLDPHLLTTPTDLHAFLPPALPRLLPFAL
STLQALLSSLPRTDTKGRQGGREGGRQGRREGGRVLVMEGATQQESTMSV
DDFFSYWTSPVDRFHRTLALTLSIPPPRLPLPSFLPPLKRRAKEGGREGG
REEGREGGEEQEGGEKDKEAKAAEVAEGGKEGRGEDGVTRKRGKKIKEDK
RKENEGEADVPLKDQPYVTYAVDGFYLDFALLPPEQGQWLHVLQGSLACL
LLPPPPPTSGYSAHGTTIPQPDKNTFSPSSASAATPVTWRNIKPPAVSTR
SAWRKERPSSSRPDGAWLCLMKGRLCMWEGGGKEGGREGRREGSRQ*
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Synonyms
Publications