NO13G03290, NO13G03290 (gene) Nannochloropsis oceanica

Overview
NameNO13G03290
Unique NameNO13G03290
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2875
Alignment locationchr13:967009..969883 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:967009..969883 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO13G03290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL130nonsL130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR048ncniR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR096ngnoR096Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G03290.1NO13G03290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|604720gene_8972Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G03290.1NO13G03290.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G03290 ID=NO13G03290|Name=NO13G03290|organism=Nannochloropsis oceanica|type=gene|length=2875bp
TCTTAATTATGCCTTGCCGCCTCTATTTTAATCGTGCCTTGCCCTACTGA
AACACAGGCAGGAGACACCATGCCCCATCTCCGTTTACCTCGTTCCCGGC
CCAGCCTCAACGGCTTCCTCTCTTCTTTCTGTATAACCTTGTTGACATTT
GTCCCCGCAGCACAAGTTGCAGCCGTCAATGTCCTTCGAACGAGGGCAGA
GGCCCGTAGTCTTTCCTGGCAGCAACTGGAGGACGTATTTCGACAGGGAA
CCATTGAAGAGGgtgagtgaggaggggacgagagagggaggaaggaatgt
cacagaggttagcacaagacatgtctttcctcgtcagattatgaatattt
acagagtaacatgcttgaagccacacaaaaccactgtccctcgctcatct
ccccgccctctctcccaccctccctccctgtctctcccagGCATCCCGGA
AGGCTACTCATACGGCTACGTTTTGGTGAGCGATCAATGGCCGCAGGTGA
CGCAGCTAATATCCAATACCTTTTGGCACGGAAAGAGGTTTGTCATTGAC
ACCCCTACAGTAGgtaaagagggaggtaggaaggggggagggaggagggt
gggattcatgggcgaagcataccgcgggggtatggcaagcactgcaccgc
ctcttaagtcatccctcttgatgctttatagcccagacaaaggacgtgag
cgcacgtctttcttaataagcctctcatctcttcctttctaattcccatc
ctcctttccagGCCACATCACCAACGCCATGGGCAATGGCTTGGTTAATG
TCCAGACAATGCCGGGGGATCTCTACGTCGGCCATTTGGAAGACATCCGA
CCAGACTTGAAGGgtaggagagagggagggaaggaggattggatggaggg
agaggaggagaaagacagttgtcgatgaccctactattggaccagttact
tacttaccaaccctccctccctccctccctccctttcttccttcctccct
ccctctctcattggcttgattggaacgatcagccatatggctggtcaagt
caatcgcagggttgacgaaatctgtcctgttaatcacgagcacgacaccc
acctgatcctcccttcctttcctccttccctccttccctccctccctcct
tccttccttccagCCCTTCAACTCGACCGGAAGCCTAGCTTGATTGTCGA
TTATGGTAATGGTGGAGGTGATGAAATTCGACTCGTGAACAGCAAGAAGA
GGATCTACCTCGGCCGgtagggagggagggagggagggagggagggaggg
agggagggagaagtgggggacaggagaagtgagagggaaggaaaacgagg
ttgacgtgtgattcgttggtttacgtagagtcaatcctcacgagagcgca
tattcaatcagccacccttggccaaactacacgcaaccacacccttcctt
cctccctccctccttccctccctccctccctccctccctccagTGGCACG
GACTGGGCCCCCGCTCCCTACGCCAAGATCTTTGGTTATTTCGTGCTGCA
GCTTTTCGACCGGCCTCATGCTATGGAATTCACTGTGATGGgtgaggagg
gtggagagggcggaagggagggagggcgggaaggcgccttataggtcaga
cctcaacaactttttccccattggttttttgttttctttaaaaacgtgct
gctgtacccagcgcgcattccccccttcctccttcccacagtatcacttc
atttattctcctcctcactttcattctgtcgcagGCGTCAGAAACCGAAT
GGACTTGAACGAGCGGATCGAAGCGGCAGAGGCCGGGGAGGAGGAAGGGA
GGGAGGAAGCGGGGGACGGGCAGGTCTTCATAGTGATGGAGCCCGTCAAT
AAGAAGGCGATTGATCTTACAGTGCATGGCTCTATGCGCGAAGAAACAGA
AGAGGAAGAGGTGCTTGAGGTCAGTCATTTAAGAGGGGAGCTGATCCATC
AGAGCAAGTCGGAAGAGGGAGAGGGGAAGGGGGGAACGGAGGGAAGAAAT
ATAAATACAAAATGGAGGGAATTGCCGTGAAATACCAATAACGTATGTAA
AATTACAAACTAGGAGAAAGAAAAACAAAAATGAAAAGTCATTCCGTACG
GCAGGAAGCAGCATCGGAAGGCAGCATCGGAAGGGGGTATGAATGTCTCG
CCGTAAGCGACCCGGATGGCTGACTTGCTGTGTGTGGGTGCTTGTCCCTC
TCCTCAACAGGGGTTACGGAACAGGCTTCATCATCGCTTTTGTACACCTC
CTCGTCCTGGTTCCCTCCCTGTGCCTTTTGTATCGATTTCTGGTATCAAA
ATATTTATTTCCCCGTTACTGAAGCGAGGAGCTTGAAGCGCGGCGCATCG
CTTGCTTGAGCGGCGGAAACAAGGACAAGTAAGATCCAGCTTCTCCTCCT
GCGAACCTATACACCTCATAGCTATAGTTCTATAGTTATATAGTTCTTTA
CTGTACCAAAAACGCGCGGTCTGAGAATGATCGTTCTGTTCCTGTGGGCT
TTGCTATATTGCTGTCGGCCTTGGAGAGATCAGTTGGGTGGTGGTGTTCT
CCTGCGTCGGGATCGTGGGATTGAAAGCAGCTGCACGTTTATGTCTAAAC
GCGCGCACACGCAGCACACATGCAAGCACACACATAAACTCACACACGCT
CTCACACACACTTAACATCCGACTCTCCTCTCCGCGCGGAGCAAATCTGC
CAAGTCTGGGGGCAGCGAAGGCTACCTTGCTTAGCGAAGAAGAGCGGTCG
ACTCCATCTGACGGTGCTCACCATCCCCCTCTCATTATCACGCCCATCGA
CACAGCGAATATAGAACATACAGGC
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protein sequence of NO13G03290.1

>NO13G03290.1-protein ID=NO13G03290.1-protein|Name=NO13G03290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=305bp
MPHLRLPRSRPSLNGFLSSFCITLLTFVPAAQVAAVNVLRTRAEARSLSW
QQLEDVFRQGTIEEGIPEGYSYGYVLVSDQWPQVTQLISNTFWHGKRFVI
DTPTVGHITNAMGNGLVNVQTMPGDLYVGHLEDIRPDLKALQLDRKPSLI
VDYGNGGGDEIRLVNSKKRIYLGRGTDWAPAPYAKIFGYFVLQLFDRPHA
MEFTVMGVRNRMDLNERIEAAEAGEEEGREEAGDGQVFIVMEPVNKKAID
LTVHGSMREETEEEEVLEVSHLRGELIHQSKSEEGEGKGGTEGRNINTKW
RELP*
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Synonyms
Publications