NO13G03270, NO13G03270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G03270 vs. NCBI_GenBank
Match: XP_005855696.1 (hypothetical protein NGA_0644900 [Nannochloropsis gaditana CCMP526] >EKU20663.1 hypothetical protein NGA_0644900 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 129.8 bits (325), Expect = 1.800e-26 Identity = 63/96 (65.62%), Postives = 77/96 (80.21%), Query Frame = 0 Query: 295 MGLIIGYVGASHIPAGKKESHAKMLMAGEKSEDGRGALLVVEEFRNVAVLVNAFKAARAKGDGKGGKPGAFAFGEDVIQGLKGRVWLPEGKVLVNN 391 MGLI+GYVG SHIPA KK SHA+MLM+G KSEDGRGALLVVEEFRN+A L+ +K + +G GK G+++F +DVIQ L+GRVWLP GKV+V N Sbjct: 1 MGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGKGKAGSYSFSDDVIQKLQGRVWLPGGKVVVKN 96
BLAST of NO13G03270 vs. NCBI_GenBank
Match: XP_007726030.1 (phosphoglycolate phosphatase [Capronia coronata CBS 617.96] >EXJ83344.1 phosphoglycolate phosphatase [Capronia coronata CBS 617.96]) HSP 1 Score: 91.3 bits (225), Expect = 7.300e-15 Identity = 54/131 (41.22%), Postives = 74/131 (56.49%), Query Frame = 0 Query: 191 LAVATKACDGVLDVCNLLTKEGTPFCIATTSPKPRVPISVKAASLEPFFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAEKCDPEDCIAVEDSGSGVGSAANARMGLIIGYVGASHIPAGKK--ESHAKML 320 L+ + C GV + L KEG P + +TS KPRV S+K A ++ +FP E ++S + +PP KP P +YL A PE+C+ VEDS SG +A A + L IGYVG I GK+ E AK+L Sbjct: 92 LSAKAEPCPGVPEQLERLAKEGYPMSVVSTSAKPRVVASLKKAGIDKYFPDEHVYSAATSLNPPSSKPDPKIYLYACEQLGVKPEECVTVEDSKSGATAAMRAGIPL-IGYVGVYGIEEGKEKMEQMAKLL 221
BLAST of NO13G03270 vs. NCBI_GenBank
Match: XP_009157638.1 (phosphoglycolate phosphatase [Exophiala dermatitidis NIH/UT8656] >EHY57177.1 phosphoglycolate phosphatase [Exophiala dermatitidis NIH/UT8656]) HSP 1 Score: 87.4 bits (215), Expect = 1.100e-13 Identity = 52/131 (39.69%), Postives = 72/131 (54.96%), Query Frame = 0 Query: 191 LAVATKACDGVLDVCNLLTKEGTPFCIATTSPKPRVPISVKAASLEPFFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAEKCDPEDCIAVEDSGSGVGSAANARMGLIIGYVGASHIPAGKK--ESHAKML 320 L+ + C GV + L KEG P + +TS KPRV S+K ++ +FP E ++S + +PP KP P +YL A PE+CI VEDS SG +A A + L I YVG + GK+ E AK+L Sbjct: 92 LSAKAEPCPGVPEQLERLKKEGYPMAVVSTSAKPRVVASLKKVGIDKYFPDEHVYSAATSLNPPSSKPDPKIYLYACEQLGVKPEECITVEDSKSGATAAMRAGIPL-IAYVGVYGVEEGKEKMEQMAKLL 221
BLAST of NO13G03270 vs. NCBI_GenBank
Match: WP_041032972.1 (HAD family phosphatase [Tolypothrix campylonemoides] >KIJ78797.1 HAD family hydrolase [Tolypothrix campylonemoides VB511288]) HSP 1 Score: 87.4 bits (215), Expect = 1.100e-13 Identity = 64/197 (32.49%), Postives = 98/197 (49.75%), Query Frame = 0 Query: 162 FQLKPLTDVLAAQSFPSIFTMQK--------EETNMA---LAVATKACDGVLDVCNLLTKEGTPFCIATTSPKPRVPISVKAASLEPFFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAEKCDPEDCIAVEDSGSGVGSAANARMGLIIGYVGASHIPAGKKESHAKMLMAGEKSEDGRGALLVVEEFRNVAVLVNA 348 F KP ++LA S+ T+ + EE A L+V A +G +V + L +G F + + S R+ + AA+L +FP ++I S + R KP PD+YL A + + C+AVEDS SGV SA A +G IIGYVG +HI ++ S A L++ GA ++E ++ L+ A Sbjct: 55 FAGKPYREILAKIYADSVTTLNERDIDRLVAEEEKRAIERLSVHATATEGTPEVLSSLRDDGFEFALVSNSSLERLSACLSAAALTDYFPSDRIFSAQGSLPVRRPKPLPDIYLYAVKCLEAEVSRCVAVEDSISGVRSAVAAGIGHIIGYVGGTHISENERRSRADALVSA-------GAQQIIERMHDLIGLLAA 244
BLAST of NO13G03270 vs. NCBI_GenBank
Match: WP_006634115.1 (HAD family phosphatase [Microcoleus vaginatus] >EGK86499.1 HAD-superfamily hydrolase, subfamily IA, variant 3 [Microcoleus vaginatus FGP-2]) HSP 1 Score: 87.0 bits (214), Expect = 1.400e-13 Identity = 65/198 (32.83%), Postives = 95/198 (47.98%), Query Frame = 0 Query: 162 FQLKPLTDVLAAQSFPSIFT---------MQKEETNMA---LAVATKACDGVLDVCNLLTKEGTPFCIATTSPKPRVPISVKAASLEPFFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAEKCDPEDCIAVEDSGSGVGSAANARMGLIIGYVGASHIPAGKKESHAKMLMAGEKSEDGRGALLVVEEFRNVAVLVNA 348 F KP ++L + +P FT + EE A L V KA G +V + L +G + + + S R+ + +A+L +FP E + S R KP PD+YL A D DC+AVEDS SGV +A A +G IIGYVG +HI ++ S A L + GA V+E ++ L++A Sbjct: 55 FAGKPYREIL-KKLYPDSFTTINERDIDRLVAEEEKRAIERLTVEAKATQGTPEVLSYLRDDGFKYALVSNSSLQRLSACLTSAALTDYFPSEHVFSAHDSLPVARPKPLPDIYLHTAKCLDADVSDCVAVEDSLSGVRAAVAAGIGHIIGYVGGTHISEDERSSRADNLQSA-------GAHQVIERMHDLIGLLSA 244
BLAST of NO13G03270 vs. NCBI_GenBank
Match: XP_001939350.1 (HAD-superfamily hydrolase [Pyrenophora tritici-repentis Pt-1C-BFP] >EDU42069.1 HAD-superfamily hydrolase [Pyrenophora tritici-repentis Pt-1C-BFP]) HSP 1 Score: 86.3 bits (212), Expect = 2.300e-13 Identity = 59/160 (36.88%), Postives = 78/160 (48.75%), Query Frame = 0 Query: 180 FTMQKEE----TNMALAVATK-------ACDGVLDVCNLLTKEGTPFCIATTSPKPRVPISVKAASLEPFFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAEKCDPEDCIAVEDSGSGVGSAANARMGLIIGYVGASHIPAGKKESHAKMLMAGEKSEDG 329 FTM EE L TK C GV D N L KEG P + +TS K RV S++ A + FFPPE ++S + PP KP P +YL AA P + + VEDS SG +A A + IGYVG I GK++ + E+++ G Sbjct: 70 FTMSPEEMDDFVQQELGAVTKKLSEKAVECPGVTDQLNWLKKEGYPMSVVSTSAKSRVVASIEKAGIAHFFPPEHVYSAATSLTPPSSKPDPKIYLFAAEQLGVKPSEAVTVEDSKSGATAAMRAGIP-CIGYVGIYGIEEGKEKMDQMAKLLTEETKCG 228
BLAST of NO13G03270 vs. NCBI_GenBank
Match: WP_017285586.1 (HAD family phosphatase [Leptolyngbya boryana] >BAS59609.1 HAD-superfamily hydrolase, subfamily IA, variant 3 [Leptolyngbya boryana IAM M-101] >BAS65957.1 HAD-superfamily hydrolase, subfamily IA, variant 3 [Leptolyngbya boryana dg5] >BAY54048.1 HAD-superfamily hydrolase subfamily IA, variant 3 [Leptolyngbya boryana NIES-2135]) HSP 1 Score: 85.5 bits (210), Expect = 4.000e-13 Identity = 83/291 (28.52%), Postives = 124/291 (42.61%), Query Frame = 0 Query: 65 VCFDFDGTLGDTESPAMEVAFWEVAAYLPSLPVDDPAALQSFKQEFIENNAGRAFEFMVEDINKEREGKGLSTVEEAWSVLPSDPKILSLVDAARAKFQLKPLTDVLAAQSFPSIFTMQKEETNMA---LAVATKACDGVLDVCNLLTKEGTPFCIATTSPKPRVPISVKAASLEPFFPPE-------KIHSGESDFDPPRFKPAPDVYLKAAAAEKCDPEDCIAVEDSGSGVGSAANARMGLIIGYVGASHIPAGKKESHAKMLMAGEKSEDGRGALLVVEEFRNVAVLV 346 V FD DGT+ D+E A++ A W++ A + + P A EFI+N AG+ ++ ++ I K+ P L+ D I + EE N A L++ +A G DV + L ++ F + + S R+ + AA L +F E +I S R KP PD+YL AA D C+AVEDS SGV SA A + ++IGYVG +HI ++ L A G V+E+ RN+ L+ Sbjct: 10 VLFDHDGTIVDSEIIALKSA-WKLTA---EVACEFPGAQFYDLPEFIKNFAGKPYQEILAQIYKD------------------SPMALTEAD----------------------IQHLVLEEENRAIDHLSLEAQATAGTSDVLSELIRQEVEFALVSNSSLRRLRACLVAAQLSDYFTSEHSAEGNCRIFSANDSLPVRRPKPLPDIYLHAARCLGADITSCVAVEDSMSGVKSAIAAGIPIVIGYVGGTHITENERSDRVSALQAA-------GVQHVIEDMRNLIQLL 249
BLAST of NO13G03270 vs. NCBI_GenBank
Match: OAL54542.1 (HAD-like protein [Pyrenochaeta sp. DS3sAY3a]) HSP 1 Score: 85.1 bits (209), Expect = 5.200e-13 Identity = 52/124 (41.94%), Postives = 69/124 (55.65%), Query Frame = 0 Query: 198 CDGVLDVCNLLTKEGTPFCIATTSPKPRVPISVKAASLEPFFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAEKCDPEDCIAVEDSGSGVGSAANARMGLIIGYVGASHIPAGKK--ESHAKML 320 C GV D N L ++G P + +TS K RV S++ A + FFPPE ++S + DPP KP P +Y+ AA P + I VEDS SG +A A + IGYVG I GK+ E AK+L Sbjct: 99 CPGVTDELNKLKEQGYPMSVVSTSAKSRVVASIEKAGIAHFFPPEHVYSAATSLDPPSSKPDPAIYIYAAEQLGVKPSEAITVEDSKSGATAAMRAGIP-CIGYVGIYGIEEGKEKMEQMAKLL 221
BLAST of NO13G03270 vs. NCBI_GenBank
Match: EFQ88990.1 (hypothetical protein PTT_14913 [Pyrenophora teres f. teres 0-1]) HSP 1 Score: 84.3 bits (207), Expect = 8.900e-13 Identity = 58/160 (36.25%), Postives = 78/160 (48.75%), Query Frame = 0 Query: 180 FTMQKEE----TNMALAVATK-------ACDGVLDVCNLLTKEGTPFCIATTSPKPRVPISVKAASLEPFFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAEKCDPEDCIAVEDSGSGVGSAANARMGLIIGYVGASHIPAGKKESHAKMLMAGEKSEDG 329 FTM EE L TK C GV + N L KEG P + +TS K RV S++ A + FFPPE ++S + PP KP P +YL AA P + + VEDS SG +A A + IGYVG I GK++ + E+++ G Sbjct: 70 FTMSPEEMDDFVQQELGAVTKKLSEKAVECPGVTEQLNWLKKEGYPMSVVSTSAKSRVVASIEKAGIAHFFPPEHVYSAATSLTPPSSKPDPKIYLFAAEQLGVKPAEAVTVEDSKSGATAAMRAGIP-CIGYVGIYGIEEGKEKMDQMAKLLTEETKCG 228
BLAST of NO13G03270 vs. NCBI_GenBank
Match: XP_017998448.1 (Phosphorylated carbohydrates phosphatase [Phialophora attae] >KPI38485.1 Phosphorylated carbohydrates phosphatase [Phialophora attae]) HSP 1 Score: 82.4 bits (202), Expect = 3.400e-12 Identity = 50/124 (40.32%), Postives = 66/124 (53.23%), Query Frame = 0 Query: 198 CDGVLDVCNLLTKEGTPFCIATTSPKPRVPISVKAASLEPFFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAEKCDPEDCIAVEDSGSGVGSAANARMGLIIGYVGASHIPAGKK--ESHAKML 320 C G L K+G P + +TS KPRV S+K ++ FFP K++S + +PP KP P +YL A PE+C+ VEDS SG +A A + IGYVG I GK+ E AK L Sbjct: 109 CPGATAELEKLEKQGYPMAVVSTSAKPRVVASLKKVGMDKFFPDAKVYSAATSLNPPSSKPDPKIYLFACEQLGVKPEECVTVEDSRSGATAAMRAGIP-FIGYVGVYGIEDGKERMEQMAKTL 231 The following BLAST results are available for this feature:
BLAST of NO13G03270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G03270 ID=NO13G03270|Name=NO13G03270|organism=Nannochloropsis oceanica|type=gene|length=3921bpback to top protein sequence of NO13G03270.1 >NO13G03270.1-protein ID=NO13G03270.1-protein|Name=NO13G03270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=391bpback to top Synonyms
Publications
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