NO13G03230, NO13G03230 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G03230 vs. NCBI_GenBank
Match: EWM20745.1 (putative plastid-lipid-associated protein chloroplastic-like protein [Nannochloropsis gaditana]) HSP 1 Score: 315.1 bits (806), Expect = 1.500e-82 Identity = 152/194 (78.35%), Postives = 172/194 (88.66%), Query Frame = 0 Query: 1 MLLSGFPPFSTATGSKKGLAQIKQLKKNLFDSLEGSDKGRVDKDGSKQRTINAILALAEANPTPNSATSGLASGTWDLVWTTEDEIHLFRKKGLLGCACRAVLQTTEQSERRLENIIEFDQNSALRIVSKLTPEATGPRVYFTWEDARVIYKGFSLPFPSFFFVRNAYYDNVYLDKELRCVKDIRGNYLVVRRV 195 MLLSGF P T TGS+K QIK+LKK LF+++EGSD+GRV+ G ++RTI AI ALA NPTPNSATS LASGTWDLVWTTE+EIHLFRK+GLLGC C+AVLQTTEQS +RLENIIEF QNSALRI+SKL+PE +GPRVYFTWEDARVIYKGF LPFPSFFFV+NAYYDN+YLD E+RCV+DIRGNYLVVRRV Sbjct: 71 MLLSGFFPAGT-TGSRKDSTQIKKLKKTLFETMEGSDRGRVNLGGGRERTIQAIQALAAVNPTPNSATSPLASGTWDLVWTTEEEIHLFRKQGLLGCTCQAVLQTTEQSTQRLENIIEFSQNSALRIISKLSPEPSGPRVYFTWEDARVIYKGFVLPFPSFFFVKNAYYDNIYLDSEIRCVRDIRGNYLVVRRV 263
BLAST of NO13G03230 vs. NCBI_GenBank
Match: XP_005855694.1 (plastid-lipid associated protein pap, partial [Nannochloropsis gaditana CCMP526] >EKU20661.1 plastid-lipid associated protein pap, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 206.5 bits (524), Expect = 7.700e-50 Identity = 111/194 (57.22%), Postives = 125/194 (64.43%), Query Frame = 0 Query: 1 MLLSGFPPFSTATGSKKGLAQIKQLKKNLFDSLEGSDKGRVDKDGSKQRTINAILALAEANPTPNSATSGLASGTWDLVWTTEDEIHLFRKKGLLGCACRAVLQTTEQSERRLENIIEFDQNSALRIVSKLTPEATGPRVYFTWEDARVIYKGFSLPFPSFFFVRNAYYDNVYLDKELRCVKDIRGNYLVVRRV 195 MLLSGF P T TGS+K QIK+LKK LF+++EGSD+GRV+ G ++RTI AI ALA NPTPNSATS LASGTWDLVWTTE E +GPRVYFTWEDARVIYKGF LPFPSFFFV+NAYYDN+YLD E+RCV+DIRGNYLVVRRV Sbjct: 59 MLLSGFFPAGT-TGSRKDSTQIKKLKKTLFETMEGSDRGRVNLGGGRERTIQAIQALAAVNPTPNSATSPLASGTWDLVWTTE--------------------------------------------------EPSGPRVYFTWEDARVIYKGFVLPFPSFFFVKNAYYDNIYLDSEIRCVRDIRGNYLVVRRV 201
BLAST of NO13G03230 vs. NCBI_GenBank
Match: XP_005785179.1 (hypothetical protein EMIHUDRAFT_471624 [Emiliania huxleyi CCMP1516] >EOD32750.1 hypothetical protein EMIHUDRAFT_471624 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 110.2 bits (274), Expect = 7.500e-21 Identity = 69/188 (36.70%), Postives = 100/188 (53.19%), Query Frame = 0 Query: 15 SKKGLAQIKQLKKNLFDSLEGSDKGRVDKDGSKQRTINAILA-LAEANPTPNSATSGLASGTWDLVWTTEDEIHLFRKKGLLGCACRAVLQTTE------QSERRLENIIEFDQNSALRIVSKLTPEA-TGPRVYFTWEDARVIYKGFSLPFPSFFFVRNAYYDNVYLDKELRCVKDIRGNYLVVRRV 195 S +G A LK + S G + D ++Q+ +A LA L+ NPTP A S L SGTW+ VWTTE E++ KGLLG R QT + + L N+IEF++ LR+ S ++P+A G R F+++ V ++ LP P V + + +YLD ELR +D+RG+ LV RV Sbjct: 175 SGRGAAARGSLKAEIRSLAASSRGGVLPFDAAQQQRFDAALAELSALNPTPEPARSPLFSGTWECVWTTESELNFAVDKGLLGLPWRRTYQTIDVPRGALTTPSTLTNVIEFEEGGFLRVGSTISPDAERGERFSFSFDSCAVRWRSLELPLPP---VGRGWGELLYLDDELRVQRDVRGDLLVATRV 359
BLAST of NO13G03230 vs. NCBI_GenBank
Match: CBJ32674.1 (plastid-lipid associated protein PAP / fibrillin family protein [Ectocarpus siliculosus]) HSP 1 Score: 104.8 bits (260), Expect = 3.200e-19 Identity = 56/168 (33.33%), Postives = 89/168 (52.98%), Query Frame = 0 Query: 24 QLKKNLFDSLEGSDKGRVDKDGSKQRTINAILALAEANPTPNSATSGLASGTWDLVWTTEDEIHLFRKKGLLGCACRAVLQTTEQSERRLENIIEFDQNSALRIVSKLTPEATGPRVYFTWEDARVIYKGFSLPFPSFFFVRNAYYDNVYLDKELRCVKDIRGNYLVV 192 +LK+ L D++ + +G + ++ I A+ NP S TS S W L WTTE EI ++GL G V Q + R L N + F +S + S + PE +GPRV F +E ++ Y GF++P P V ++++VYLD++LR +D+RG+ V+ Sbjct: 97 KLKQRLLDTVRDTKRGISTSEEQRKDIDELIAAIEPFNPNAKSVTSESLSARWILEWTTEREIIFLMERGLPGKPSGPVEQDIDVDARTLSNRMIFGDDSLFEVASSIDPEDSGPRVNFEFEACKLKYGGFTIPLPP---VGKGWFESVYLDQDLRVTRDVRGDVTVL 261
BLAST of NO13G03230 vs. NCBI_GenBank
Match: XP_005783977.1 (hypothetical protein EMIHUDRAFT_231716 [Emiliania huxleyi CCMP1516] >XP_005789400.1 hypothetical protein EMIHUDRAFT_252286 [Emiliania huxleyi CCMP1516] >EOD31548.1 hypothetical protein EMIHUDRAFT_231716 [Emiliania huxleyi CCMP1516] >EOD36971.1 hypothetical protein EMIHUDRAFT_252286 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 101.3 bits (251), Expect = 3.500e-18 Identity = 61/182 (33.52%), Postives = 91/182 (50.00%), Query Frame = 0 Query: 20 AQIKQLKKNLFDSLEGSDKGRVDKDGSKQRTINAILALAEANPTPNSATSGLASGTWDLVWTTEDEIHLFRKKGLLGCACRAVLQTTEQSER--------RLENIIEFDQNSALRIVSKLTPEATGPRVYFTWEDARVIYKGFSLPFPSFFFVRNAYYDNVYLDKELRCVKDIRGNYLVVRR 194 A+ ++LK L ++ G G +R + LA PT + A+S L GTWD++WTTE E+ K+GLLG C A Q ++ L+N IEFD LR+ S P A+G RV F ++ ++ LP P V + ++D +Y+D+ELR +D RG+ V R Sbjct: 256 AERRRLKAQLLEACGGQSLGAEAGAEDLRRVRDLSDRLAALTPTADPASSPLLCGTWDIIWTTESELLALTKRGLLGLPCTAAYQAIARTREGGAGPWAYSLDNAIEFD-GGFLRVGSTCEPAASGGRVNFVFQSCAARWRALELPLPP---VGSGWFDVLYVDEELRVCRDSRGDLQVCAR 433
BLAST of NO13G03230 vs. NCBI_GenBank
Match: KOO30170.1 (putative plastid-lipid-associated protein chloroplastic-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 100.9 bits (250), Expect = 4.600e-18 Identity = 67/190 (35.26%), Postives = 94/190 (49.47%), Query Frame = 0 Query: 7 PPFSTATGSKKGLAQIKQLKKNLFDSLEGSDKGRVDKDGSKQRTINAILA-LAEANPTPNSATSGLASGTWDLVWTTEDEIHLFRKKGLLGCACRAVLQTTEQSERRLENIIEFDQNSALRIVSKLTPE-ATGPRVYFTWEDARVIYKGFSLPFPSFFFVRNAYYDNVYLDKELRCVKDIRGNYLVVRRV 195 PP ST T AQ + LK L + S G D + Q ++A L NPT + A S L +G W VWTTE E++ KGL G QT + L N+IEFD AL + S + P+ A G R F +E V ++G ++P P V + + +YLD ELR KD+RG+ ++ +V Sbjct: 136 PPSSTFTAG----AQRRSLKAELLELARASRGGIEPFDAAAQARFERVMAQLPALNPTADPARSTLFNGEWTCVWTTEKELNFAVDKGLFGLPWVRTYQTIDVPGGTLSNVIEFD-GGALTVGSTIAPDTALGSRFNFAFERCTVRWRGLTVPLPP---VGKGWGELLYLDDELRIQKDVRGDIVIATKV 317
BLAST of NO13G03230 vs. NCBI_GenBank
Match: KOO28300.1 (putative plastid-lipid-associated protein chloroplastic-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 99.0 bits (245), Expect = 1.700e-17 Identity = 62/183 (33.88%), Postives = 88/183 (48.09%), Query Frame = 0 Query: 21 QIKQLKKNLFDSLEGSDKGRVDKDGSKQRTINAILALAEANPTPNSATSGLASGTWDLVWTTEDEIHLFRKKGLLGCACRAVLQT---TEQSERR----------LENIIEFDQNSALRIVSKLTPEATGPRVYFTWEDARVIYKGFSLPFPSFFFVRNAYYDNVYLDKELRCVKDIRGNYLV 191 Q + LK L + EG G + + R IN I L + NPT A S GTW +VWTTE E+ GLLG C+ QT T ++ R L N I F + LR+ S P+A G RV F +E ++ LP P V + +++ +YLD++LR D+RG++ V Sbjct: 275 QRRALKTALMQACEGQRLGAATDEAGRARIINLIRELEQLNPTARPAQSTKLLGTWRVVWTTESELLALTNSGLLGLPCQGASQTIGRTAAADERGAQRGAFDYSLSNEISF-EGGFLRVGSSCEPQAQGGRVNFRFESCAAKWRSVQLPLPP---VGSGWFEVLYLDEDLRLCTDVRGDWQV 453
BLAST of NO13G03230 vs. NCBI_GenBank
Match: XP_009038352.1 (hypothetical protein AURANDRAFT_28329, partial [Aureococcus anophagefferens] >EGB07123.1 hypothetical protein AURANDRAFT_28329, partial [Aureococcus anophagefferens]) HSP 1 Score: 97.8 bits (242), Expect = 3.900e-17 Identity = 58/145 (40.00%), Postives = 79/145 (54.48%), Query Frame = 0 Query: 54 ILALAE-ANPTPNSATSGLASGTWDLVWTTEDEIHLFRKKGLLGCA-CRAVLQTTEQSERRLENIIEFDQNSALRIVSKLTP---EATGPRVYFTWEDARVIYKGFSLPFPSFFFVRNAYYDNVYLDKELRCVKDIRGNYLVVRR 194 +LAL E ANPTP A S L SG WDL+WTTE E++ KGL C V QT + + LEN + FD +S L + S + P +A G R F + + ++G +P P V + D +YLD LR +DIRG+ L+ R Sbjct: 29 LLALLEAANPTPRPAESPLFSGAWDLLWTTERELNFAMDKGLFAAGPCTGVSQTIDVAAGDLENTVLFDNDSKLFVGSSIAPSPDDAAGRRFDFKFSSCYLQWRGTKVPLPP---VGEGWGDILYLDDTLRVQRDIRGDLLIATR 170
BLAST of NO13G03230 vs. NCBI_GenBank
Match: XP_006573219.1 (PREDICTED: probable plastid-lipid-associated protein 11 isoform X2 [Glycine max] >KRH75290.1 hypothetical protein GLYMA_01G076100 [Glycine max]) HSP 1 Score: 95.1 bits (235), Expect = 2.500e-16 Identity = 67/179 (37.43%), Postives = 95/179 (53.07%), Query Frame = 0 Query: 19 LAQIKQLKKNLFDSLEGSDKG-RVDKDGSKQRTI-NAILALAEANPTPNSATSGLA-SGTWDLVWTTE-DEIHLFRKKGLLGCACRAVLQTTEQSERRLENIIEFDQNSALRIVSKLTPEATGPRVYFTWEDARVIYKGFSLPFPSFFFVRNAYYDNVYLDKELRCVKDIRGNYLVVRR 194 +AQ K++L + D+G R D +K+ I AI A+A A S T+G A S TW L+WTTE +++ + K L G VLQ + ER L N+I F + + S + A+ RV F + A + K + +P P F ++D VYLD +LR VKDIRG+YLVV R Sbjct: 34 IAQSGSAKEHLLALIADQDRGIRTQSDPAKRAAIVQAIDAVASAG--AGSVTTGDALSATWRLLWTTEKEQLFIIEKAPLFGTRAGDVLQVIDVRERTLNNVISFPPDGVFFVRSSI-EVASPQRVNFRFTSAVLRGKNWEIPLPPF---GRGWFDTVYLDDDLRVVKDIRGDYLVVNR 206
BLAST of NO13G03230 vs. NCBI_GenBank
Match: KRH75291.1 (hypothetical protein GLYMA_01G076100 [Glycine max]) HSP 1 Score: 95.1 bits (235), Expect = 2.500e-16 Identity = 67/179 (37.43%), Postives = 95/179 (53.07%), Query Frame = 0 Query: 19 LAQIKQLKKNLFDSLEGSDKG-RVDKDGSKQRTI-NAILALAEANPTPNSATSGLA-SGTWDLVWTTE-DEIHLFRKKGLLGCACRAVLQTTEQSERRLENIIEFDQNSALRIVSKLTPEATGPRVYFTWEDARVIYKGFSLPFPSFFFVRNAYYDNVYLDKELRCVKDIRGNYLVVRR 194 +AQ K++L + D+G R D +K+ I AI A+A A S T+G A S TW L+WTTE +++ + K L G VLQ + ER L N+I F + + S + A+ RV F + A + K + +P P F ++D VYLD +LR VKDIRG+YLVV R Sbjct: 34 IAQSGSAKEHLLALIADQDRGIRTQSDPAKRAAIVQAIDAVASAG--AGSVTTGDALSATWRLLWTTEKEQLFIIEKAPLFGTRAGDVLQVIDVRERTLNNVISFPPDGVFFVRSSI-EVASPQRVNFRFTSAVLRGKNWEIPLPPF---GRGWFDTVYLDDDLRVVKDIRGDYLVVNR 206 The following BLAST results are available for this feature:
BLAST of NO13G03230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G03230 ID=NO13G03230|Name=NO13G03230|organism=Nannochloropsis oceanica|type=gene|length=2181bpback to top protein sequence of NO13G03230.1 >NO13G03230.1-protein ID=NO13G03230.1-protein|Name=NO13G03230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=195bpback to top Synonyms
Publications
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