NO13G03200, NO13G03200 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G03200 vs. NCBI_GenBank
Match: EWM20744.1 (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 294.7 bits (753), Expect = 1.000e-75 Identity = 155/352 (44.03%), Postives = 218/352 (61.93%), Query Frame = 0 Query: 155 SAVKKRPRGSCEVCYQLKTQCDKTFPCGRCYRLNKPCRPPTESLELLHXXXXXXXXXXXXXXXXXXXXXXXXXXXLLDLVIERIDFKPMVHLYMQAFHELREEGLVDRRRAIGLLRMWMNLGLLFGGNSDPTLGMFSQVQDSLGISGVELEDPVYLAHEAPLSVRRQRLRETQADSMAGKRAKALRLTPAFQHADDGRRAVYLATVDGADSSVATNHAYDTFYRRPGELMQDMWERRCLISFLLASVVAPEDRLSFFRGLLYITLTTCPAKMTGLVKCFDRQGNMTLFLVEARAIQLSPTAWAAMSIHEPAPSSRHITSRPDTTRTVNTHHPA-FQPASPLREGSMQWRGRE 506 S ++ R R SC VCY K CD+ FPCGRC+R NKPCRP T + LDLVIER D MV LY+QAF +L +EG+++R+RAIGLL+ W++LG++ G+ DPT G F++V+ + I+ +ELEDP LA+E PL + RL +AD + G+ AK L + A++ RAVY+A +D D V +N A++T++R P E MQDMW+RRCL++FL A+ VAPEDRL++F+ L + TL+T K T +K FDRQG MTL+L + + +++ P +A++ + EPAP SRH+T+RPD TR +THHP AS R S R R+ Sbjct: 109 SRIRSRER-SCRVCYLEKASCDRNFPCGRCFRYNKPCRPATVT-----------QGSRRPVRGTSSSSLLFQSSPYLDLVIERSDLPAMVPLYLQAFQDLFQEGVLNRKRAIGLLKSWVDLGVMMDGDCDPTFGAFAEVKAAFQINDLELEDPECLAYEPPLHAEKGRLWAARADRVLGEGAKHLEENLVCRQANNSSRAVYMARMDCKDQWVISNKAHNTYFRSPAEFMQDMWKRRCLLAFLFAAGVAPEDRLAYFKLLHFATLSTSLMKRTAFLKIFDRQGRMTLYLSDHQVVKMGPNEYASLCVTEPAPPSRHVTTRPDVTRLRSTHHPCNSSSASMFRVASGDMRRRQ 448
BLAST of NO13G03200 vs. NCBI_GenBank
Match: XP_005855698.1 (hypothetical protein NGA_0645100 [Nannochloropsis gaditana CCMP526] >EKU20665.1 hypothetical protein NGA_0645100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 194.5 bits (493), Expect = 1.400e-45 Identity = 107/266 (40.23%), Postives = 155/266 (58.27%), Query Frame = 0 Query: 231 LDLVIERIDFKPMVHLYMQAFHELREEGLVDRRRAIGLLRMWMNLGLLFGGNSDPTLGMFSQVQDSLGISGVELEDPVYLAHEAPLSVRRQRLRETQADSMAGKRAKALRLTPAFQHADDGRRAVYLATVDGADSSVATNHAYDTFYRRPGELMQDMWERRCLISFLLASVVAPEDRLSFFRGLLYITLTTCPAKMTGLVKCFDRQGNMTLFLVEARAIQLSPTAWAAMSIHEPAPSSRHITSRPDTTRTVNTHHP-AFQPASPLR 496 LD ++E ID + MV LY+QAF EL ++G+++R+R I LL+ W + + FGGN DPT G+F++VQ + I+ EL P + A R+RL + A+ + G+ AK+ F+ +DG RA+ + + G + + N Y T++RRP E M+D W RRCLI FLLA+ V P+DR SFFR L+ L + TGL K DR + LFL E R ++LSP + ++ + EPAP SRHI + RT P P+ P R Sbjct: 126 LDQIMELIDIRAMVPLYLQAFRELLQKGMLNRKRGIILLKYWREVKIQFGGNCDPTHGLFAEVQGAFWIADKELGSPSSILDGAVSDAERRRLWMSHANRLGGEGAKS---DAIFKQLNDGSRAIRMECLGGKERRLVVNDVYLTYFRRPEEFMKDAWARRCLIGFLLAATVVPDDRPSFFRELVQGALGNPGTRQTGLFKALDRHAQVNLFLFENRVVELSPGEFVSLIMFEPAPPSRHIPPQHPVARTRPLQEPICSTPSLPSR 388
BLAST of NO13G03200 vs. NCBI_GenBank
Match: XP_005854767.1 (hypothetical protein NGA_0115602 [Nannochloropsis gaditana CCMP526] >XP_005855415.1 hypothetical protein NGA_0115601 [Nannochloropsis gaditana CCMP526] >EKU20946.1 hypothetical protein NGA_0115601 [Nannochloropsis gaditana CCMP526] >EKU21594.1 hypothetical protein NGA_0115602 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 124.4 bits (311), Expect = 1.800e-24 Identity = 87/305 (28.52%), Postives = 139/305 (45.57%), Query Frame = 0 Query: 154 PSAVKK-RPRGSCEVCYQLKTQCDKTFPCGRCYRLNKPCRPPTESLELLHXXXXXXXXXXXXXXXXXXXXXXXXXXXLLDLVIERIDFKPMVHLYMQAFHELREEGLVDRRRAIGLLRMWMNLGLLFGGNSDPTLGMFSQVQDSLGISGVELEDPVYLAHEAPLSVRRQRLRETQADSMAGKRAKALRLTPAFQHADDGRRA----VYLATVDGADSSVATNHAYDTFYRRPGELMQDMWERRCLISFLLASVVAPEDRLSFFRGLLYITLTTCPAKMTGLVKCFDRQGNMTLFLVEARAIQLSP 454 PSA+ K P C C +T+C FPC RC RL+ C P E +L+ V+ KP +Y+QAF L G + R A+ L+MW L L G +D TLG+ S VQ +S +ELE+P+ + + P VR QRL++ Q+ + + R + L+ T F+ ++G RA + + + + A N + + EL +R+ + S+L+A + APEDR ++ ++ + T K +D+ G++ L L AR I+L P Sbjct: 42 PSALSKLDPMWPCYACRASRTKCSGGFPCARCSRLSVCCLPNNWKRE----------------------------EPILEYVLTTHSPKPFAEMYLQAFERLFIAGKIRRDSALRTLKMWEFLSSLAG--ADVTLGVASHVQKRFNVSAIELEEPMRMLQDPPSHVRYQRLQQYQSSAASQARTQQLKETEIFKRENEGTRASRASLLMFVTNRSTMWAACNEFHAARLKEATELWDKALQRKLIWSYLMAPLYAPEDRRTYIDNIVEMIFGHEKLTKTMFFKMYDKDGSVKLCLHTARTIRLGP 316
BLAST of NO13G03200 vs. NCBI_GenBank
Match: EWM20741.1 (hypothetical protein Naga_100249g4 [Nannochloropsis gaditana]) HSP 1 Score: 115.5 bits (288), Expect = 8.300e-22 Identity = 81/266 (30.45%), Postives = 117/266 (43.98%), Query Frame = 0 Query: 231 LDLVIERIDFKPMVHLYMQAFHELREEGLVDRRRAIGLLRMWMNLGLLFGGNSDPTLGMFSQVQDSLGISGVELEDPVYLAHEAPLSVRRQRLRETQADSMAGKRAKALRLTPAFQHADDGRRAVYLATVDGADSSVATNHAYDTFYRRPGELMQDMWERRCLISFLLASVVAPEDRLSFFRGLLYITLTTCPAKMTGLVKCFDRQGNMTLFLVEARAIQLSPTAWAAMSIHEPAPSSRHITSRPDTTRTVNTHHP-AFQPASPLR 496 LD ++E ID + MV LY+QAF EL ++G+++R+R I LL+ W + + FGGN DPT G+F++VQ + I+ EL P + A R+RL + A+ + G+ AK P+DR SFFR L+ L + TGL K DR + LFL E R ++LSP + ++ + EPAP SRHI + RT P P+ P R Sbjct: 187 LDQIMELIDIRAMVPLYLQAFRELLQKGMLNRKRGIILLKYWREVKIQFGGNCDPTHGLFAEVQGAFWIADKELGSPSSILDGAVSDAERRRLWMSHANRLGGEGAK-----------------------------------------------------------------IPDDRPSFFRELVQGALGNPGTRQTGLFKALDRHAQVNLFLFENRVVELSPGEFVSLIMFEPAPPSRHIPPQHPVARTRPLQEPICSTPSLPSR 387
BLAST of NO13G03200 vs. NCBI_GenBank
Match: EWM21361.1 (hypothetical protein Naga_100666g2 [Nannochloropsis gaditana]) HSP 1 Score: 95.1 bits (235), Expect = 1.200e-15 Identity = 72/235 (30.64%), Postives = 112/235 (47.66%), Query Frame = 0 Query: 253 ELREEGLVDRRRAIGLLRMWMNLGLLFGGNSDPTLGMFSQVQDSLGISGVELEDPVYLAHEAPLSVRRQRLRETQADSMAGKRAKALRLTPAFQ---HADDGRRAVYLATVDGADSSVATNHAYDTFYRRPGELMQDMWERRCLISFLLASVVAPEDRLSFFRGLLYITLTTCPA-KMTGLVKCFDRQGNMTLFLVEARAIQLSPTAWAAMSIHEPAPSSRHITSRPDTTRTVNT 484 E EG +DRRR I +R+W +L +L GG D T GM +V S+GIS V++ED +A S R+ R +E A + + +R P ++ +L + G TN A+D G +M + R LLA +VAP+DR +FF G + K T L+K F G++ L +V R +++ + + E AP S+ +TSRP + ++T Sbjct: 9 EFGSEG-IDRRRVIECMRIWQHLSILVGG--DVTWGMADKVGRSMGISAVDVEDNASVALGPTRSRRKGRAQEEVA--ILVRLVDEVRTMPDYKILARTQHESVPTFLGLLAGERLVQVTNAAFDRMVEGAGRIMSSAFVHRTTCILLLAQLVAPDDRSTFFEGFIQALFVPSRCFKSTFLLKWFQGDGDIRLCIVSFRPVKVGHLS-GVQILFEAAPQSKRLTSRPHRNQVIDT 237
BLAST of NO13G03200 vs. NCBI_GenBank
Match: EWM20491.1 (hypothetical protein Naga_100382g3 [Nannochloropsis gaditana]) HSP 1 Score: 89.0 bits (219), Expect = 8.400e-14 Identity = 86/329 (26.14%), Postives = 137/329 (41.64%), Query Frame = 0 Query: 230 LLDLVIERIDFKPMVHLYMQAFHELREEGLVDRRRAIGLLRMWMNLGLLFGGNSDPTLGMFSQVQDSLGISGVELE----DPV------------------------YLAHEAPLSVRRQRLRETQADSMAGKRAKALRL--TPAFQHADDGRRAVYLATVDGADSS--VATNHAYDTFYRRPGELMQDMWERRCLISFLLASVVAPEDRLSFFRGLLYITLTT------------CPAK----MTGLVKCFDRQGNMTLFLVEARAIQLSPTAWAAMSIH-----EPAPSSRHITSRPDTTRTVNTHHPAFQPASPLREGSMQWRGRE 506 LL ++ER+D M ++ AFH ++ G + R +G+LR W L L G D TLG+ + + ++L + EL+ D V + P +V + + +A A A RL +P F+ DDG + L VD + VA+N AY + PG L+ + R CL FL A+ VA DR ++FR L + P + + +K F R G++ L+ +++S +H EP P+SR+IT RP+ +T + F+ GS+ RE Sbjct: 34 LLGTILERVDRPRMAEQFLDAFHAVQRRGKIHREGMVGMLRHWKKLSDLAG--EDLTLGIGAAIANALKVEAWELQYRGGDTVKRSESWTGDSSLGIIHTPNSFQGRLSSKRFPTTVEEGPMGLLLEEELAAVEAGAARLKASPLFRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLEPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPERGRRRDGVPRRERLLYSEFLKIFSRDGHVRLYWARLAQLEVSMREGEEEKMHFLLWMEPVPASRYITDRPE--KTTQSKTTLFRQRPSAETGSLSREARE 358
BLAST of NO13G03200 vs. NCBI_GenBank
Match: EWM23477.1 (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 81.3 bits (199), Expect = 1.700e-11 Identity = 80/303 (26.40%), Postives = 122/303 (40.26%), Query Frame = 0 Query: 230 LLDLVIERIDFKPMVHLYMQAFHELREEGLVDRRRAIGLLRMWMNLGLLFGGNSDPTLGMFSQVQDSLGISGVEL----------------------EDPVYLAHEAPLSVRR-----------QRLRETQADSMAGKRAKALRLTPAFQHADDGRRAVYLATVDGADSS--VATNHAYDTFYRRPGELMQDMWERRCLISFLLASVVAPEDRLSFFRGLLYITLTT------------CPAK----MTGLVKCFDRQGNMTLFLVEARAIQLSPTAWAAMSIH-----EPAPSSRHITSRPD 477 LL+ ++ER+D M ++ AFH ++ G V R +G+LR W L L G D TLG+ + + + + EL P + + LS +R L E A R KA L F+ DDG + L VD + VA+N AY + PG L+ + R CL FL A+ VA DR ++FR L + P + + +K F R G++ L+ ++ + +H EP P+SR+IT RP+ Sbjct: 190 LLETILERVDRSRMAEEFLDAFHAVQRRGTVHREGMVGMLRHWKKLSDLSG--QDLTLGVGAAIAKAFHVEQWELRYRRRNKVFNRSESSAGNVSLGSTPTSNSSQGQLSSKRFLTAVKEGPRGLLLEELMAVEAGAARLKASSL---FRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLDPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPEGGSSREGVPPRERLLYSEFLKIFSRDGHVRLYWARLAQLEATTREGEEEKLHFLLWMEPVPASRYITDRPE 487
BLAST of NO13G03200 vs. NCBI_GenBank
Match: EWM20703.1 (hypothetical protein Naga_101787g1 [Nannochloropsis gaditana]) HSP 1 Score: 80.1 bits (196), Expect = 3.900e-11 Identity = 63/220 (28.64%), Postives = 110/220 (50.00%), Query Frame = 0 Query: 243 MVHLYMQAFHELREEGLVDRRRAIGLLRMWMNLGLLFGGNSDPTLGMFSQVQDSLGISGVELE-----DPVYLAHEAPLSVRRQRL---RETQADSMAGKRAKA-LRLTPAFQHADDGRRAVYLATVDGADSSV-ATNHAYDTFYRRPGELMQDMWERRCLISFLLASVVAPEDRLSFFRGLLYITLTTCPAK-MTGLVKCFDRQGNMTLFLVEARAIQL 452 M ++QAF + EG +DR + I +L +W N+ ++ +D + G+ + + L + +L P +LA A + R + RE A + GK +++ L+ + A+ ADDG + + +DG + TN YD L + ++ + L+AS+++P+DR +FR L + T+ + + LVK FD QG M L+L EA +QL Sbjct: 1 MAQEFLQAFTRVHREGDLDRAKVIQMLNIWQNMSII--AAADVSCGLTRAIAELLHLPSTDLALLPPFLPPFLASRAFQTQRAALILHARERAARAKEGKGSQSLLKESVAWMMADDGVVPLLMMCMDGPHMLLQTTNRPYDKLVAGAQSLHEHCLRKKTIQFLLMASLISPDDRSLWFRCLAHSLFTSERYRHVAVLVKLFDAQGQMRLYLHEASQVQL 218
BLAST of NO13G03200 vs. NCBI_GenBank
Match: XP_005852531.1 (hypothetical protein NGA_0697500 [Nannochloropsis gaditana CCMP526] >EKU23301.1 hypothetical protein NGA_0697500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 70.1 bits (170), Expect = 4.000e-8 Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 0 Query: 429 LVKCFDRQGNMTLFLVEARAIQLSPTAWAAMSIHEPAPSSRHITSRPDTTRTVNTHHPA-FQPASPLREGSMQWRGRE 506 L + FDRQG MTL+L + + +++ P +A++ + EPAP SRH+T+RPD TR +THHP AS R S R R+ Sbjct: 33 LRRIFDRQGRMTLYLSDHQVVKMGPNEYASLCVTEPAPPSRHVTTRPDVTRLRSTHHPCNSSSASMFRVASGDMRRRQ 110 The following BLAST results are available for this feature:
BLAST of NO13G03200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G03200 ID=NO13G03200|Name=NO13G03200|organism=Nannochloropsis oceanica|type=gene|length=3516bpback to top protein sequence of NO13G03200.1 >NO13G03200.1-protein ID=NO13G03200.1-protein|Name=NO13G03200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=906bpback to top Synonyms
Publications
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