NO13G03190, NO13G03190 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO13G03190 vs. NCBI_GenBank
Match: EWM20742.1 (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 253.1 bits (645), Expect = 9.400e-64 Identity = 133/213 (62.44%), Postives = 164/213 (77.00%), Query Frame = 0 Query: 40 RLDLAEHKLRLLLLSSISSTSDSGTSMAAVDYFLSTLISELEAEQILSIEDLFGVIQNYVPENLLRALAVEDEDDMEVLVSKLWSRLLKENVIPPQEDEEVGVMGLERRGDKGCELCARVMPLTRHHLRPRTLHKKLLKQGISQEELNICATICRPCHTAVHRSHDNDTLATLLYTVPALLEDEKVGKFVRWASKQRGRAQQDGHNQQLRYQR 253 +L + + KLR+L+ S +SS+S + A V+Y STLISELEAE I+SIED+F VIQ +VPE +L +L +EDEDD+E+ VSK+W L KE VI D+E VM + R + GCELC R MPLTRHHLRPR +HK LLKQG+SQ+ELNICA ICRPCH+AVHR++DN+TLA YTV ALL DEK+GKFVRWASKQRGR Q+ GHN L+YQR Sbjct: 19 QLKVLDCKLRVLMDSCLSSSSQT----ADVEYVHSTLISELEAEHIVSIEDVFSVIQTFVPEEMLLSLGIEDEDDIELFVSKVWLLLQKERVIQETTDDE--VMSMSR--ESGCELCERAMPLTRHHLRPRAMHKILLKQGMSQDELNICAAICRPCHSAVHRTYDNETLAINFYTVSALLADEKIGKFVRWASKQRGREQKMGHNPLLKYQR 223
BLAST of NO13G03190 vs. NCBI_GenBank
Match: CBN77276.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 114.0 bits (284), Expect = 6.800e-22 Identity = 54/100 (54.00%), Postives = 66/100 (66.00%), Query Frame = 0 Query: 153 CELCARVMPLTRHHLRPRTLHKKLLKQGISQEELNICATICRPCHTAVHRSHDNDTLATLLYTVPALLEDEKVGKFVRWASKQRGRAQQDGHNQQLRYQR 253 C LC R+MPLTRHH+ P++ HK+ K+G S LN ICRPCH+AVHR+HD LA TV LL DE +G+FV WA KQR + QD N LRY+R Sbjct: 125 CSLCERLMPLTRHHVMPKSTHKRYRKKGYSDAVLNRTIAICRPCHSAVHRAHDALALAERFTTVEELLADETIGRFVAWARKQRTTSVQDSRNNLLRYRR 224
BLAST of NO13G03190 vs. NCBI_GenBank
Match: PNW78591.1 (hypothetical protein CHLRE_09g390800v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 110.2 bits (274), Expect = 9.800e-21 Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = 0 Query: 152 GCELCARVMPLTRHHLRPRTLHKKLLKQGISQEELNICATICRPCHTAVHRSHDNDTLATLLYTVPALLEDEKVGKFVRWASKQRGRAQQDGHNQQLRYQR 253 GC LC R MPLT HHL PR +H K ++ ++ EELN +CRPCH+A+HR++DN TLA T+ ALL+ E + KF+RWA KQ+ ++D N RY+R Sbjct: 128 GCALCGRQMPLTFHHLIPRDVHAKYKRKALTAEELNRGVDVCRPCHSAIHRTYDNKTLAASYSTLEALLQSEPLQKFIRWAQKQKVTTREDMANPNFRYRR 228
BLAST of NO13G03190 vs. NCBI_GenBank
Match: KXZ47559.1 (hypothetical protein GPECTOR_34g718 [Gonium pectorale]) HSP 1 Score: 108.6 bits (270), Expect = 2.800e-20 Identity = 68/188 (36.17%), Postives = 101/188 (53.72%), Query Frame = 0 Query: 70 DYFLSTLISELEAEQILSI-EDLFGVIQNYVPENLLRALAVEDEDDMEVL----VSKLWSRLLKENVIPPQEDEEVGVMGLERRGDKGCELCARVMPLTRHHLRPRTLHKKLLKQGISQEELNICATICRPCHTAVHRSHDNDTLATLLYTVPALLEDEKVGKFVRWASKQRGRAQQDGHNQQLRYQR 253 D+ + ++++EL+ ++S +D + EN+ E E + L VS + S + + + ED+E +G GC +C R MPLT HHL PR +H K K+G+ E+LN ICRPCH+A+HR++DN TLA YT+ LL E + KFV WA KQ+ D N + RY+R Sbjct: 39 DFLVESVVAELQQGGLVSSQQDAHDRFDQLLYENVTGVEPDEVEGFADALHRLIVSAVESAVAE---LEGSEDDEQANIG-------GCAMCGRQMPLTFHHLIPRDVHDKYKKKGLGTEQLNAGIDICRPCHSAIHRTYDNKTLAAHYYTLHRLLASEPLQKFVAWARKQKVTTASDITNPRFRYRR 216
BLAST of NO13G03190 vs. NCBI_GenBank
Match: XP_001694451.1 (predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 107.8 bits (268), Expect = 4.900e-20 Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = 0 Query: 153 CELCARVMPLTRHHLRPRTLHKKLLKQGISQEELNICATICRPCHTAVHRSHDNDTLATLLYTVPALLEDEKVGKFVRWASKQRGRAQQDGHNQQLRYQR 253 C LC R MPLT HHL PR +H K ++ ++ EELN +CRPCH+A+HR++DN TLA T+ ALL+ E + KF+RWA KQ+ ++D N RY+R Sbjct: 1 CALCGRQMPLTFHHLIPRDVHAKYKRKALTAEELNRGVDVCRPCHSAIHRTYDNKTLAASYSTLEALLQSEPLQKFIRWAQKQKVTTREDMANPNFRYRR 100
BLAST of NO13G03190 vs. NCBI_GenBank
Match: KZT30127.1 (hypothetical protein NEOLEDRAFT_1160105 [Neolentinus lepideus HHB14362 ss-1]) HSP 1 Score: 98.2 bits (243), Expect = 3.900e-17 Identity = 76/211 (36.02%), Postives = 108/211 (51.18%), Query Frame = 0 Query: 43 LAEHKLRLLLLSSISSTSDSGTSMAAVDYFLSTLIS--------ELEAEQILSIEDLFGV----IQNYVP----ENLLRALAVEDEDDMEVLVSKLWSRLLKENVIPPQEDEEVGVMGLERRGDKGCELCARVMPLTRHHLRPRTLHKKLLKQGISQEE-LNICATICRPCHTAVHRSHDNDTLATLLYTVPALLEDEKVGKFVRWASKQR 237 L +H ++ LL+ TS T+ + +D F+S L S EL ++ ++ G+ ++ P E+LL +DD L+ K+ +KE PP + R K CELC R +PLT HHL PR+ H K+LK+ EE LN A +CRPCH+AVHR N+ LA YT+ LLE E + K+ R+ASKQR Sbjct: 8 LKDHLVQHLLMDP-ELTSSEETAASELDDFVSYLSSEIWPCLPKELRNASYSTLANVPGIDEFALEELTPPTVIESLLSYGICSGDDDAFRLLRKVLQDYVKELCAPPP------IWSATRA--KECELCGREVPLTYHHLIPRSTHAKVLKRKWHPEEMLNSVAWLCRPCHSAVHRVASNEDLARSYYTLDLLLEREDIQKWTRYASKQR 209
BLAST of NO13G03190 vs. NCBI_GenBank
Match: XP_001749355.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ85876.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 97.4 bits (241), Expect = 6.600e-17 Identity = 62/160 (38.75%), Postives = 92/160 (57.50%), Query Frame = 0 Query: 85 ILSIEDLF--GVIQNYVPENLLRALAVEDEDDMEVLVSKLWSRLLKENVIPPQEDEEVGVMGLERRGDKGCELCARVMPLTRHHLRPRTLHKKLLKQGISQEELNICATICRPCHTAVHRSHDNDTLATLLYTVPALLEDEKVGKFVRWASKQRGRAQQD 243 ILS++ + V+Q P + + + + D+ VS ++V+P E EE+GV CELCAR +PLTRHHL PR +H KL+K + + ELN A +CR CH+AVHR H N LA ++V LL DE V ++V +ASK + +++Q+ Sbjct: 74 ILSVDGQYHEAVLQKATPHSAVVRVQFTEYTDVVEDVS-------LDDVMPAPEAEELGV----------CELCARNVPLTRHHLYPRCMHGKLVKT-MDKAELNQVALLCRSCHSAVHRLHGNAELAASYHSVELLLADEAVQRWVLYASKLKKQSRQE 215
BLAST of NO13G03190 vs. NCBI_GenBank
Match: KXN68992.1 (hypothetical protein CONCODRAFT_79537 [Conidiobolus coronatus NRRL 28638]) HSP 1 Score: 96.7 bits (239), Expect = 1.100e-16 Identity = 77/212 (36.32%), Postives = 108/212 (50.94%), Query Frame = 0 Query: 59 TSDSGTSMAA--VDYFLSTLISELEAEQILSIEDLF--------------GVIQNYVPENLLRALAVEDEDDMEVLVSKLWSRLLKENVIPPQEDEEVGVMGLERRGDKGCELCARVMPLTRHHLRPRTLHKKLLKQG-ISQEELNICAT-ICRPCHTAVHRSHDNDTLATLLYTVPALLEDEKVGKFVRWASKQRGRAQQDGHNQQLRYQR 253 TS TS + V+ + L E +Q+ +EDL ++Q + E LL +E ++E L S SR LK+N+I G + +E CELC R MPLT HHL PR H L K+G +++++ T ICRPCHT +HR++DN LA TV LLE EKV KF+ + SKQ+ R++ G LRY + Sbjct: 2 TSSVNTSKLSQLVNQTIIDLDKSEEVDQVPGVEDLILEIVNSLNIGAYEVEILQLELNEQLLDFDLFSNESELE-LFSITLSRRLKDNLI-------FGEVPVEEEDKGSCELCEREMPLTFHHLIPRETHSHLAKKGTFTKDDMRTRGTNICRPCHTHLHRTYDNLELAINYNTVEKLLESEKVCKFIEYISKQKIRSRVRG-AVPLRYSK 204
BLAST of NO13G03190 vs. NCBI_GenBank
Match: XP_007868349.1 (hypothetical protein GLOTRDRAFT_79058 [Gloeophyllum trabeum ATCC 11539] >EPQ53041.1 hypothetical protein GLOTRDRAFT_79058 [Gloeophyllum trabeum ATCC 11539]) HSP 1 Score: 95.5 bits (236), Expect = 2.500e-16 Identity = 72/205 (35.12%), Postives = 102/205 (49.76%), Query Frame = 0 Query: 49 RLLLLSSISSTSDSGTSMAAVDYFLSTLISEL-----------EAEQILSIEDLFGV-IQNYVPENLLRALA----VEDEDDMEVLVSKLWSRLLKENVIPPQEDEEVGVMGLERRGDKGCELCARVMPLTRHHLRPRTLHKKLL-KQGISQEELNICATICRPCHTAVHRSHDNDTLATLLYTVPALLEDEKVGKFVRWASKQR 237 RLLL+ ++S T+ A +D F+S L SE+ + S+ D+ + + P + L D+D + K+ +KE PP V R K CELC R +PLT HHL PR+ H K L K+ Q+ LN A +CRPCH+AVHR+ N+ LA YT+ LLE E + K+ ++ASKQR Sbjct: 20 RLLLVPELNSA--DATASAELDDFVSYLASEIWPRLPEETREASYSTVSSLPDIDELPLDEVAPPTFVETLVSYGICSDDDSAVRWLRKVLLDYVKETCAPPP------VWSTTR--TKECELCGREVPLTYHHLIPRSTHAKALKKKWHPQDMLNSVAWLCRPCHSAVHRAASNEDLARSYYTLELLLEREDIQKWAKYASKQR 214
BLAST of NO13G03190 vs. NCBI_GenBank
Match: EJD52758.1 (hypothetical protein AURDEDRAFT_55402 [Auricularia subglabra TFB-10046 SS5]) HSP 1 Score: 94.0 bits (232), Expect = 7.300e-16 Identity = 53/137 (38.69%), Postives = 76/137 (55.47%), Query Frame = 0 Query: 101 ENLLRALAVEDEDDMEVLVSKLWSRLLKENVIPPQEDEEVGVMGLERRGDKGCELCARVMPLTRHHLRPRTLHKKLLKQG-ISQEELNICATICRPCHTAVHRSHDNDTLATLLYTVPALLEDEKVGKFVRWASKQR 237 ++L+ V D +D L+ +++ PP ++ R G GCE+C R MPLT HHL PR++H K+LK+G E LN A +CR CH+ VHR N+ LA YTV L+E E + ++ WAS+QR Sbjct: 75 DSLVAYGVVPDAEDALRLLRAAVDAFVEQASSPPAIGKQT------RAGVDGCEVCTRDMPLTYHHLIPRSVHSKVLKRGWHPAERLNAVAWLCRSCHSTVHRVASNEDLARNFYTVDLLIEREDIQRWRAWASRQR 205 The following BLAST results are available for this feature:
BLAST of NO13G03190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G03190 ID=NO13G03190|Name=NO13G03190|organism=Nannochloropsis oceanica|type=gene|length=1763bpback to top protein sequence of NO13G03190.1 >NO13G03190.1-protein ID=NO13G03190.1-protein|Name=NO13G03190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=253bpback to top Synonyms
Publications
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