NO13G03090, NO13G03090 (gene) Nannochloropsis oceanica

Overview
NameNO13G03090
Unique NameNO13G03090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2941
Alignment locationchr13:885835..888775 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:885835..888775 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO13G03090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR048ncniR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G03090.1NO13G03090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633257gene_8999Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G03090.1NO13G03090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G03090 ID=NO13G03090|Name=NO13G03090|organism=Nannochloropsis oceanica|type=gene|length=2941bp
ATGAACCTACCACCTGCCGAGACCGACGGAGAGACATCCAAGACCCTTTC
CCTCGACGCCTCCCCCTCCTCCCCTCCATTGTCTTCCTTCTCCTCCCTCT
CCACTTCCTCGTCTTCGACTCTCCTTCCTTGTCAGCTGTCGTCCTCCTCC
TCGTCGGAAGCAGCCGAGGATGGGAAATTTGGCGGGGAGCGGAGGGACAA
GCACAAGgtaggaaggcaaagagggcaaaggagggtggaattaaacccca
tacgcgctaacatgtgtagaatatgacgtacgattgatatgatgatcacc
ccgaactcaacttcccttatagGACCCGGCGCTCATGCAGCTCCTGCTTT
CCCAGCTCTCTTCCGCCTCCACCGGCGTCTCCCTCACAGCTCAAACCAAA
ACAAAAGACGGGAGAGAAGGCACCGAAAAGAAGAATAGTAAAAAGAAAAT
GAAGAATAAGAAGTCCCAGACCAACGCAAAGAGACGTACAGCACGACGAG
GGGGGGGAGAATCAAAGGAGGAGGAGGAGGAGGAGGGAGAAATTCACCGT
GAGATAGAGAGGATGATGATGGATGTACAGTGGGAGGAGGGGAACGAGGG
AGAAAGAGAGGGAGGGGAGGAGAAGAAGGAGGAGGAGTTAGATCTCCTTT
TAGCGCCGGGAAGAGAGGAGAAGGAAGGGGAGGAGGGAGCGGCGATGCTG
CACAGGAAGGTGACTTCCATTCTGGCGCTGTTGCAGGGGAGGAAGGAGGA
GAATGATCGgtacgtggattaggggcaagccctccctccctctttatttg
tctgtcctaactcctcttgacgttgtacgacacgttccctccctccctcc
ctccctccctccctccctccctccctccctccctccctccctccctccct
ccctccctcagGTTGGAAAATGACGTGGCCGCGGTGGCCCGCGCATACCT
GGCCATGGGCAAGAAGAACGAGCTACTGCGCCTTCGGACAGATTCATTCC
ACGAGGAGAGGCGGAAAAGGGAGGGCTTGAGGGAGAGGCTGGTGAGCATT
AACAGGCTTTTGGCGCAGCGGATCAAGgtaaggaagagggagggagggag
agaggaagagggggagggagggctttcgacacttacttcacctctacaca
atgccaactcaacaacaacaatgacgacatgtaggaatttcaagagacgc
atccgtccttctcctccccccctcttcttcctcctcttcttcctcttcct
cctcctgtcctgttcgcccatcagacagcgacgggcagagcccgcccgag
gaaggagggaaggagggagggaaggagggagggggcggcgatactgacgt
ggcaacgatgcgtgccacattcttgaagAGCGTCCAACACCTGAAGGAGA
GGGTGCAGGAGGAGGAGAGGCAGgtagggagggagggaaggagggaggat
aagtcgatttaatacgtgtctaatggatcccttcctgagcgttttccctc
cctccctccttccctcccttcctccccctttccctggattatcacctgtt
cactcctccttctctccctcccgccctccctccctagAACCAGTGTGTGG
CCGACGAGATTCAACGGCTCGAAGGTCACCGTGAACAGATCGCCCTGTAC
AAGGAAGGGAGGGATGCGACCGAGgtaatggcgggaggggagggagggag
ggagggagggagggaggaagaacgaaaatgggcagggagggagggaggga
gggagggagggagggagggagggagggagggagggagggaggaagataag
gatgaagggaggggttctgatccatttataattcacccacccacccactc
acagAGATTGCTCGAGTCGAAGAGGAAAGCCGCTATGGCGACGATGCAGC
AAACgtcagtccctccctccctccctccctcagcttttgcatttttctcc
ctttcgcctcctcccttttcttgcccgctatctccttcccccttcccgta
agtcccttccaatctcctcatttcccctccctccctccctccctccctcc
ctccctcccttcccccatccctccctccctgcagCCTGGCAAGCAAGCAG
CACCAGCTCCAGTTGCATCTTAAATATTTTCAATCGATCCTTCAGGCCGA
AGAGATCAAGAAAAATGAGTGTGAAAAAATGGAAAAAGAAgtaggtcggg
ggggagagggattagtaggcggtagaagaggggcgtggtggactgcgaaa
gtggaaggaggaagggaaagagggagggatgcaaggaaggatgggaagaa
ggagggaaagaggaaaggagggcgggaaaatgggagggtgccagccaacg
cgtgaagccatccacacacctaccgtcaattaacctcccctccatcctcc
ctccctccctccctccctccctccctccctccctctctcagTTGGCCCGT
ATTACCAGCATGCGGGTCCAAGTGGAGCAGTCTCTCAAAGACAAAGCCGC
CTATGACAGCTCCAATCGGgtactccttccctccctccctccctccatcc
atcgccatcttcctccctcttccactgtatgccctccctccctctgtccc
tccctgtacgccatttcttcacccctcacccctccttccttccctccctc
tagACATTGTTCTCTGAGCTCTCCTCGTACCACGACCGTTACGTCCAGAT
CATCTCTTCCCTCCATGCATCTACAACTGACATGGCCACCAAAACCGCAT
CTTCCTCGGACTCCCTTGCCTCCCTTCGCTCCCTTCTTCCCTCCCTCCTG
GCATCCAACGTTAAGTTGGAGAAGGAAGCGCGGCGCTTGCAGTCGGCAAG
AGGGGAGAAAATCAGGCTGTTGCAACAGTTGGAAGAGAGGGGGAAGGATG
GAGGGAGGGACGAAGCGGTAGCGAAAGAGGAGGAGGGTTGA
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protein sequence of NO13G03090.1

>NO13G03090.1-protein ID=NO13G03090.1-protein|Name=NO13G03090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=488bp
MNLPPAETDGETSKTLSLDASPSSPPLSSFSSLSTSSSSTLLPCQLSSSS
SSEAAEDGKFGGERRDKHKDPALMQLLLSQLSSASTGVSLTAQTKTKDGR
EGTEKKNSKKKMKNKKSQTNAKRRTARRGGGESKEEEEEEGEIHREIERM
MMDVQWEEGNEGEREGGEEKKEEELDLLLAPGREEKEGEEGAAMLHRKVT
SILALLQGRKEENDRLENDVAAVARAYLAMGKKNELLRLRTDSFHEERRK
REGLRERLVSINRLLAQRIKSVQHLKERVQEEERQNQCVADEIQRLEGHR
EQIALYKEGRDATERLLESKRKAAMATMQQTLASKQHQLQLHLKYFQSIL
QAEEIKKNECEKMEKELARITSMRVQVEQSLKDKAAYDSSNRTLFSELSS
YHDRYVQIISSLHASTTDMATKTASSSDSLASLRSLLPSLLASNVKLEKE
ARRLQSARGEKIRLLQQLEERGKDGGRDEAVAKEEEG*
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Synonyms
Publications