NO13G03020, NO13G03020 (gene) Nannochloropsis oceanica

Overview
NameNO13G03020
Unique NameNO13G03020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2030
Alignment locationchr13:844398..846427 +

Link to JBrowse

Properties
Property NameValue
DescriptionGlutathione s-transferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:844398..846427 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0005515protein binding
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR036282Glutathione-S-Trfase_C_sf
IPR036249Thioredoxin-like_sf
IPR036265HIT-like_sf
IPR011146HIT-like
IPR010987Glutathione-S-Trfase_C-like
IPR004045Glutathione_S-Trfase_N
IPR001310Histidine_triad_HIT
Homology
BLAST of NO13G03020 vs. NCBI_GenBank
Match: EWM21969.1 (glutathione s-transferase [Nannochloropsis gaditana])

HSP 1 Score: 632.1 bits (1629), Expect = 1.200e-177
Identity = 313/411 (76.16%), Postives = 344/411 (83.70%), Query Frame = 0
Query:    1 MALRGGSVLALVTIFLSVTPALGFLAPSATLSTFRCTSSKSGS--TSRSHR-RSSSRTTMAAGKDATLYDFPVSNNGGRCRVVIYDKGIQDKIEIKKPDGALTEINPQGKVPVLIDHSLNEFQIFESDTILRHLVGKYEGTGPSYLPSSLAARTKSDLICRFHDMYITTIQGCMYKASPPFGVFDNREDALIELKKQMKLLEGMVDGEGPFLCGKEKSMADATLFCTGVFLEQILPNHFGWTYQEVFGPLLTKWWENLLATESAFQKVHSEIILGIQGWEEKRRWMTILGADFQDLGPATIFDRIIKKEVPSDVVYENDKVLAFRDIAPQAPTHILVIPKRRQGLTSLRKATEEQKGVLGEMMLAVAKIVRQEGIEGGYRLVVNDGEEAGQTVNHLHIHILAGRPLKWPPG 409
            M LR G V   V+  L    A GFL P++         S  GS  T  S R +  +R  M AGKDATLYDFPVSNNGGRCRVVIYDKG+QDKIEIKKPDG LT INPQGKVPVLIDH+L +FQIFESDTILRHLV KY  TGPSYLP +LAARTKSDLICRFHDMYITT+QGCMYKA+PPFG FDNREDAL +LKKQM LLE + D  GP+LCG EKSMADATLF TGVFLEQILPNHFGWTYQEVFGP LTKWW+ LLA E+AFQKVHSEIILGIQGWEEKRRW  ILGAD QDL PAT+FD+I+ K +PS VV+ENDKVLAFRDIAPQAP HILVIPKRR GLT+LRKA+ EQKGVLGEM++AVA+IVRQE IEGGYR++VNDGEEAGQ+V+HLH+HILAGRPL WPPG
Sbjct:    1 MGLRVGDVFVSVSTVLLFGLAQGFLTPASV--------SPQGSLWTGASIRAKGCTRIQMMAGKDATLYDFPVSNNGGRCRVVIYDKGLQDKIEIKKPDGPLTSINPQGKVPVLIDHTLADFQIFESDTILRHLVHKYAETGPSYLPFTLAARTKSDLICRFHDMYITTVQGCMYKAAPPFGTFDNREDALKDLKKQMALLEELTDSNGPYLCGAEKSMADATLFATGVFLEQILPNHFGWTYQEVFGPKLTKWWDYLLANEAAFQKVHSEIILGIQGWEEKRRWSNILGADLQDLAPATVFDQILAKALPSQVVFENDKVLAFRDIAPQAPVHILVIPKRRAGLTALRKASREQKGVLGEMLVAVAEIVRQENIEGGYRVIVNDGEEAGQSVHHLHMHILAGRPLAWPPG 403          
BLAST of NO13G03020 vs. NCBI_GenBank
Match: CEM05689.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 380.2 bits (975), Expect = 8.200e-102
Identity = 174/352 (49.43%), Postives = 246/352 (69.89%), Query Frame = 0
Query:   64 TLYDFPVSNNGGRCRVVIYDKGIQDKIEIKKPD--GAL-----TEINPQGKVPVLIDHSLNEFQIFESDTILRHLVGKYEGTGPSYLPSSLAARTKSDLICRFHDMYITTIQGCMYKASPPFGVFDNREDALIELKKQMKLLEGMVDGEGPFLCGKEKSMADATLFCTGVFLEQILPNHFGWTYQEVFGPLLTKWWENLLATESAFQKVHSEIILGIQGWEEKRRWMTILGADFQDLGPATIFDRIIKKEVPSDVVYENDKVLAFRDIAPQAPTHILVIPKRRQGLTSLRKATEEQKGVLGEMMLAVAKIVRQEGIEGGYRLVVNDGEEAGQTVNHLHIHILAGRPLKWPPG 409
            TLYD P+SN+G RCR+++Y KGI+D++ I+ P   G L      +INPQGK+P  +        I ESD I R+L+ KY+G G S++P+   A+ +SD++ R HD+YI+ IQG MYKA+PPFG FD+R+ AL ELK+Q++ +E  V  +GP++ G E S+ADATLF T VF+  ILP  FGW   +V  P L +W++ + A E + ++V  EI   ++GW EK RW TILGA  +D  PAT+FD+I+ K+V +D+V+E+D+ +A RDI PQ PTH+L+ PKRR  LT LR+ATEE KG+LG +++  AK+ R EG E  YR+V+NDG +A Q+V HLH+H++ GR   WPPG
Sbjct:    5 TLYDMPISNHGARCRMIVYKKGIEDRVTIRPPGDLGGLKSEEYLKINPQGKMPTYVTD--GGLPIPESDPIARYLINKYQGVGVSFVPADATAQLRSDIVGRLHDVYISPIQGAMYKAAPPFGPFDDRQAALSELKRQLETVEACVSPDGPYITGSEISLADATLFPTMVFITYILPEQFGWQPADVLPPKLARWFQWMQANEPSAKRVFDEITGVLKGWSEKGRWTTILGAGLKDQAPATLFDKIMNKQVSADIVHEDDRCMAIRDINPQGPTHVLLFPKRRDNLTQLRQATEEHKGILGHLLVTAAKLARDEGFE-AYRIVINDGPKACQSVFHLHVHLIGGRSFSWPPG 353          
BLAST of NO13G03020 vs. NCBI_GenBank
Match: XP_005838838.1 (hypothetical protein GUITHDRAFT_157151 [Guillardia theta CCMP2712] >EKX51858.1 hypothetical protein GUITHDRAFT_157151 [Guillardia theta CCMP2712])

HSP 1 Score: 355.1 bits (910), Expect = 2.800e-94
Identity = 177/356 (49.72%), Postives = 238/356 (66.85%), Query Frame = 0
Query:   65 LYDFPVSNNGGRCRVVIYDKG--IQDKIEIKKPD---GALTE----INPQGKVPVLIDHSLNEFQIFESDTILRHLVGKYEGTGPSYLPSSLAARTKSDLICRFHDMYITTIQGCMYKASPPFGVFDNREDALIELKKQMKLLEGMVDGEGPFLCGKEKSMADATLFCTGVFLEQILPNHFG---WTYQEVFGPLLTKWWENLLATESAFQKVHSEIILGIQGWEEKRRWMTILGADFQDLGPATIFDRIIKKEVPSDVVYENDKVLAFRDIAPQAPTHILVIPKRRQGLTSLRKATEEQKGVLGEMMLAVAKIVRQEGIEGGYRLVVNDGEEAGQTVNHLHIHILAGRPLKWPPG 409
            LYD PVSNNG RCR+++Y KG  +   I IK P    G  +E    +NPQGK+P+L+    N   I ESDTI R+L+ ++    PS+LPS+L AR KSDL+CR HDMYITTIQGCMYKA PPFG F +R  AL EL++Q+  L+  +D EGP+L GKE S+ADAT+F T +F+E +LP       W  + V G  L +W+  +            EI  G+  WE   RW +IL A  +D    TIFDRII++++PS++V E++ VL F+DI PQAP H+L+IPKRR GLT LR AT + + +LG+M L  A+I +++ +  GYRLV+NDG EA Q+V HLH+H+LAGR ++WPPG
Sbjct:    5 LYDMPVSNNGARCRIIVYKKGLSLDSDILIKPPSDLGGLKSEQYLALNPQGKMPLLVTEHGN---IPESDTIARYLLDRFSAKSPSFLPSTLEARMKSDLLCRLHDMYITTIQGCMYKAEPPFGRFSSRAAALAELREQIGYLQEHIDEEGPYLTGKELSLADATIFPTVIFIEHMLPKFLDGETWDAEVVLGKKLLRWYHWI-----------KEIKEGLAVWEANERWKSILHAGLRDQDAPTIFDRIIQRQIPSEIVMEDEHVLVFKDIHPQAPVHLLIIPKRRDGLTQLRYATADHQELLGKMFLTAARIAKEQNLR-GYRLVINDGSEAQQSVFHLHMHLLAGRQMRWPPG 345          
BLAST of NO13G03020 vs. NCBI_GenBank
Match: CBN80298.1 (glutathione s-transferase [Ectocarpus siliculosus])

HSP 1 Score: 300.8 bits (769), Expect = 6.300e-78
Identity = 162/353 (45.89%), Postives = 217/353 (61.47%), Query Frame = 0
Query:   55 TTMAAGKDATLYDFPVSNNGGRCRVVIYDKGIQDKIEIKKPD--GAL-----TEINPQGKVPVLIDHSLNEFQIFESDTILRHLVGKYEGTGPSYLPSSLAARTKSDLICRFHDMYITTIQGCMYKASPPFGVFDNREDALIELKKQMKLLEGMVDGEGPFLCGKEKSMADATLFCTGVFLEQILPNHFGWTYQEVFGPLLTKWWENLLATESAFQKVHSEIILGIQGWEEKRRWMTILGADFQDLGPATIFDRIIKKEVPSDVVYENDKVLAFRDIAPQAPTHILVIPKRRQGLTSLRKATEEQKGVLGEMMLAVAKIVRQEGIEGGYRLVVNDGEEAGQTVNHLHIHILAG 401
            TTM+A +   L+D PVSNNG RCR +IY+KGI+DK++I  P   G L      ++NP GK+P L         I ESDTI ++L+ K+E  G S+ P +L AR KS  ICR  D YI  IQG MYKA PPFGV  +R  AL +L+ Q+  LE +   +GPFL G E S+ADAT + T +F+ +++   FG T     GP L  W E+ +      +++  EI   +  W    RW TIL A  +D  P +I D+ + KE+PS  V  +D V  FRDIAP APTH+L+IPK R GLT LR AT +  GVLG M+   AKI ++E +E G+R+VVNDG + GQ V HLH+H++ G
Sbjct:   30 TTMSAVQKPKLWDMPVSNNGARCRFIIYEKGIEDKVDIAPPTDVGGLKSEEYLKMNPHGKMPCLSSPDCG--SIPESDTICQYLLDKFEHEGSSFRPQTLQARMKSAAICRLFDTYIHPIQGSMYKAVPPFGVHSDRIAALDDLQTQLGYLEELASPDGPFLSGNELSLADATAWPTMIFVREMMLPRFGRT--PALGPRLLAWCEH-MDRHPVGKRIADEIKAPLDKWGANGRWDTILHAGKRDTEPPSILDKFLAKEIPSTGVLGDDSVRPFRDIAPVAPTHVLIIPKVRNGLTQLRHATADHAGVLGHMLEVAAKIAKEEELE-GFRVVVNDGAKGGQEVFHLHMHLIGG 376          
BLAST of NO13G03020 vs. NCBI_GenBank
Match: EJK63941.1 (hypothetical protein THAOC_15371 [Thalassiosira oceanica])

HSP 1 Score: 284.6 bits (727), Expect = 4.700e-73
Identity = 157/369 (42.55%), Postives = 221/369 (59.89%), Query Frame = 0
Query:   55 TTMAAGKDATLYDFPVSNNGGRCRVVIYDKGI-QDKIEIKKP-------DGALTEINPQGKVPVL-IDHSLNEFQI---FESDTILRHLVGKYEGTGPSYLPSSLAARTKSDLICRFHDMYITTIQGCMYKASP--PFGVFDNREDALIELKKQMKLLEGMVDGE-GPFLCGKEKSMADATLFCTGVFLEQILPNHFGWTYQEVFGPLLTKWWENLLATESAFQKVHSEIILGI--QGWEEKRRWMTILGADFQDLGPATIFDRIIKKEVPSDVVYENDKVLAFRDIAPQAPTHILVIPKRRQGLTSLRKATEEQKGVLGEMMLAVAKIVR--QEGIEGGYRLVVNDGEEAGQTVNHLHIHILAGRPLK 405
            TT  +G    L+D PVSNNG RCR+++Y KGI ++++++  P            ++NP G +P L I    N++ I    ESDTI R+L+ +Y   GPS+L +       S+ I R+HDMY+TTIQG MYK S   PFG + +R+ A+   +K + ++E  +  + G FLCG E S+ADATLF + VF   ILP            P L KW+ENL   +  F  V++E I G+    WE K RW  I  A   D  P T+FD+II  E+P+ VV E+D +LAF+DI P AP HILVIPK R GLT+LR+A+ E   +LG +++A  +I +  + G   G R+V+NDG + GQ V HLH+H+L GR L+
Sbjct:    8 TTSLSGSKHILFDLPVSNNGARCRIILYKKGIPKEEVDLVSPMALGGLKSDEFLKLNPAGLMPCLSIQKPENKYGISALSESDTIARYLISEYASVGPSFLSN----HPLSNQIARWHDMYLTTIQGAMYKTSERLPFGNYADRKSAISAYRKNLAVIERFMGNDTGMFLCGNEVSLADATLFPSMVFASYILPKFDDSV--AALPPKLAKWYENLKCNDEVFATVYAE-IQGVLENSWEAKGRWNDIWLAGKTDSAPGTLFDKIIAGEIPASVVKEDDHLLAFKDINPMAPAHILVIPKDRSGLTNLRQASAEHTDILGRLLIAAGEIAKDTELGFGDGARIVINDGSDGGQEVMHLHVHVLGGRKLE 369          
BLAST of NO13G03020 vs. NCBI_GenBank
Match: GAX12261.1 (hypothetical protein FisN_1Hh192 [Fistulifera solaris])

HSP 1 Score: 283.9 bits (725), Expect = 8.000e-73
Identity = 140/304 (46.05%), Postives = 197/304 (64.80%), Query Frame = 0
Query:  108 VPVLIDHSLNEFQIFESDTILRHLVGKYEGTGPSYLPSSLAARTKSDLICRFHDMYITTIQGCMYKASPPFGVFDNREDALIELKKQMKLLEG-MVDGEGPFLCGKEKSMADATLFCTGVFLEQILPNHFGWTYQEVFGPLLTKWWENLLATESAFQKVHSEIILGIQGWEEKRRWMTILGADFQDLGPATIFDRIIKKEVPSDVVYENDKVLAFRDIAPQAPTHILVIPKRRQGLTSLRKATEEQKGVLGEMMLAVAKIVRQE--GIEGGYRLVVNDGEEAGQTVNHLHIHILAGRPLKWPPG 409
            +P+L    LN   I ESDTI R+L  KY   GPS+LP       +S+LI R HD+YI+ IQ C+YK  PPF  F  R+DA+ EL KQ+ ++E  +VDG GPFLCG+E S+ADATLF T +F+E +LP    +  +    P + KW+ +L   +  F+KV+ EI   ++ W+   RW  ILGA  +D  PAT+FD+II   +P+ +V ++DK++AF+DI P  P H+L+IPK R GLT L KA+ E K +LG +M+  A+I   +  G   G R+VVNDG + GQ V HLH+H++ GR ++WPPG
Sbjct:    1 MPLLTCPDLN-LHIAESDTIARYLCSKYADRGPSFLPED----PRSNLIARIHDIYISPIQSCLYK-YPPFATFGTRKDAIAELIKQLNIIESHIVDGSGPFLCGQEVSLADATLFPTLIFIEHMLPK---FDIEAGIPPKMAKWFASLKVKDPDFKKVYDEIADSLKQWDASGRWDPILGAGLRDTDPATLFDKIISGAIPAAIVKQDDKMMAFKDINPAGPAHVLIIPKDRNGLTRLGKASVEHKEILGHLMVTAAEISNDKSLGFGDGARVVVNDGPDGGQEVMHLHVHVIGGRAMQWPPG 295          
BLAST of NO13G03020 vs. NCBI_GenBank
Match: CAH25368.1 (putative protein kinase C inhibitor, partial [Guillardia theta])

HSP 1 Score: 192.2 bits (487), Expect = 3.200e-45
Identity = 91/164 (55.49%), Postives = 117/164 (71.34%), Query Frame = 0
Query:  245 GPLLTKWWENLLATESAFQKVHSEIILGIQGWEEKRRWMTILGADFQDLGPATIFDRIIKKEVPSDVVYENDKVLAFRDIAPQAPTHILVIPKRRQGLTSLRKATEEQKGVLGEMMLAVAKIVRQEGIEGGYRLVVNDGEEAGQTVNHLHIHILAGRPLKWPPG 409
            GP L  W++ +L ++ +F KV  EI   +  W+E  RW  IL A  +D    TIFD+I+ K +PS VV+E+DKVL F+DI PQAPTH+LVIPKRR+ L+ LR AT E +G+LG M+  VAK+  +EG+ G YRLVVNDG  AGQ V HLH+H+LAGRPL WPPG
Sbjct:   20 GPKLVSWYKRML-SQPSFAKVQQEISDALSKWDENNRWAGILHAGKRDEAEQTIFDKIVAKSIPSQVVFEDDKVLVFKDINPQAPTHLLVIPKRRETLSQLRFATAEHEGILGHMLAVVAKVASEEGL-GDYRLVVNDGRGAGQEVFHLHMHVLAGRPLTWPPG 181          
BLAST of NO13G03020 vs. NCBI_GenBank
Match: XP_005836670.1 (hypothetical protein GUITHDRAFT_67731 [Guillardia theta CCMP2712] >EKX49690.1 hypothetical protein GUITHDRAFT_67731 [Guillardia theta CCMP2712])

HSP 1 Score: 192.2 bits (487), Expect = 3.200e-45
Identity = 91/164 (55.49%), Postives = 117/164 (71.34%), Query Frame = 0
Query:  245 GPLLTKWWENLLATESAFQKVHSEIILGIQGWEEKRRWMTILGADFQDLGPATIFDRIIKKEVPSDVVYENDKVLAFRDIAPQAPTHILVIPKRRQGLTSLRKATEEQKGVLGEMMLAVAKIVRQEGIEGGYRLVVNDGEEAGQTVNHLHIHILAGRPLKWPPG 409
            GP L  W++ +L ++ +F KV  EI   +  W+E  RW  IL A  +D    TIFD+I+ K +PS VV+E+DKVL F+DI PQAPTH+LVIPKRR+ L+ LR AT E +G+LG M+  VAK+  +EG+ G YRLVVNDG  AGQ V HLH+H+LAGRPL WPPG
Sbjct:   21 GPKLVSWYKRML-SQPSFAKVQQEISDALSKWDENNRWAGILHAGKRDEAEQTIFDKIVAKSIPSQVVFEDDKVLVFKDINPQAPTHLLVIPKRRETLSQLRFATAEHEGILGHMLAVVAKVASEEGL-GDYRLVVNDGRGAGQEVFHLHMHVLAGRPLTWPPG 182          
BLAST of NO13G03020 vs. NCBI_GenBank
Match: XP_002181776.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46990.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 189.1 bits (479), Expect = 2.700e-44
Identity = 83/165 (50.30%), Postives = 116/165 (70.30%), Query Frame = 0
Query:  246 PLLTKWWENLLATESAFQKVHSEIILGIQGWEEKRRWMTILGADFQDLGPATIFDRIIKKEVPSDVVYENDKVLAFRDIAPQAPTHILVIPKRRQGLTSLRKATEEQKGVLGEMMLAVAKIVRQE--GIEGGYRLVVNDGEEAGQTVNHLHIHILAGRPLKWPPG 409
            P L KW+  L  T+  F+KVH E++ G+  WEEK RW  ILGA ++D  PATIFD+++  ++P+ VV ++DK+ AF+DI P AP H+LVIPK R GLT L KATEE   +LG +++A A+I + +  G   G R+V+NDG + GQ V HLH+H+L GR ++WPPG
Sbjct:   13 PNLNKWYNQLKNTDPVFEKVHDEVMSGLNAWEEKNRWHPILGAGWRDEEPATIFDKLMSGDIPATVVKQDDKIFAFKDINPAAPAHVLVIPKDRSGLTRLGKATEEHTEILGRLLVAAAEISKDKELGFGDGARIVINDGPDGGQEVPHLHVHVLGGRSMQWPPG 177          
BLAST of NO13G03020 vs. NCBI_GenBank
Match: XP_005767128.1 (hypothetical protein EMIHUDRAFT_61926 [Emiliania huxleyi CCMP1516] >EOD14699.1 hypothetical protein EMIHUDRAFT_61926 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 188.7 bits (478), Expect = 3.500e-44
Identity = 86/164 (52.44%), Postives = 116/164 (70.73%), Query Frame = 0
Query:  245 GPLLTKWWENLLATESAFQKVHSEIILGIQGWEEKRRWMTILGADFQDLGPATIFDRIIKKEVPSDVVYENDKVLAFRDIAPQAPTHILVIPKRRQGLTSLRKATEEQKGVLGEMMLAVAKIVRQEGIEGGYRLVVNDGEEAGQTVNHLHIHILAGRPLKWPPG 409
            GP L+ WW +    + A ++V  EI  G+Q WEE+ RW  +L A  +D+ PAT+FD+I+ KE+PS+VV+E+   LAFRDI P AP HIL+IPK R GLT L  AT E   +LG +M+A A I +QEG+   +RLV N+GE AGQ+V HLH+H++ GRPL+WPPG
Sbjct:   21 GPRLSAWWSHTSNADEAAKRVADEIRSGLQPWEERGRWDAMLYAGARDVAPATLFDKILSKEIPSEVVFEDALCLAFRDINPVAPAHILIIPKHRDGLTGLGAATAEHSAILGHLMVAAAAIAKQEGL-SEFRLVTNNGEGAGQSVFHLHLHLIGGRPLEWPPG 183          
The following BLAST results are available for this feature:
BLAST of NO13G03020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21969.11.200e-17776.16glutathione s-transferase [Nannochloropsis gaditan... [more]
CEM05689.18.200e-10249.43unnamed protein product [Vitrella brassicaformis C... [more]
XP_005838838.12.800e-9449.72hypothetical protein GUITHDRAFT_157151 [Guillardia... [more]
CBN80298.16.300e-7845.89glutathione s-transferase [Ectocarpus siliculosus][more]
EJK63941.14.700e-7342.55hypothetical protein THAOC_15371 [Thalassiosira oc... [more]
GAX12261.18.000e-7346.05hypothetical protein FisN_1Hh192 [Fistulifera sola... [more]
CAH25368.13.200e-4555.49putative protein kinase C inhibitor, partial [Guil... [more]
XP_005836670.13.200e-4555.49hypothetical protein GUITHDRAFT_67731 [Guillardia ... [more]
XP_002181776.12.700e-4450.30predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_005767128.13.500e-4452.44hypothetical protein EMIHUDRAFT_61926 [Emiliania h... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR048ncniR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001586NSK001586Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G03020.1NO13G03020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|604854gene_9007Nannochloropsis oceanica (N. oceanica CCMP1779)gene
GSTgene8466Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G03020.1NO13G03020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G03020 ID=NO13G03020|Name=NO13G03020|organism=Nannochloropsis oceanica|type=gene|length=2030bp
AACATGCACAGAGAAGAAAGACCTGCCTTAGACGACCCATGGCCCTGCGT
GGTGGTTCCGTCTTGGCGCTCgtaagtgaaagtggggatctagtcggttg
atcttggcaacaagctccatagtctccccgctcaggcccacatgcatccg
cttgtcttcttgccctttctcaactcatgtatggatgtgatcgaccagtg
atgttaccgggtaaaatacgttttggtggaggttgccctcgttatctagg
ttattcatctcctcgtgctaaaatctcgaccctccatctccgtcgctgcc
tagctacatcaactacgtgtctcacttccttgtctcacgcacattgttcc
caccacacgtactttagGTCACGATCTTTCTCTCTGTCACCCCCGCCCTC
GGCTTTCTTGCTCCTTCGGCCACCCTATCCACCTTCCGCTGCACCAGCAG
TAAGAGCGGCAGCACCAGCAGGAGCCACAGAAGGAGCAGCAGCAGGACCA
CCATGGCCGCAGGAAAGGATGCAACGCTCTATGACTTTCCCGTGTCCAAC
AATGGTGGGCGATGCCGCGTGGTAATCTACGACAAGGGTATTCAAGATAA
Ggtatacacggaaataattatcagagcgccttctacccccctccctccct
ccctcctgttttcctcgaaacagtcgagatcaacaaagccgactatgcct
tgtccggaaccatcgcccgttgctcatcttctcctctctcctcccctcct
tttctccctccctcttttaccggaaacagATCGAGATCAAAAAGCCCGAC
GGCGCCTTGACAGAAATTAATCCCCAAGGCAAAGTGCCCGTGCTCATCGA
CCACTCCCTCAACGAATTTCAAATTTTTGAATCCGACACCATTCTGCGTC
ACCTGGTGGGAAAATATGAAGGAACAGGTCCTTCCTACCTCCCGTCCTCC
CTGGCCGCGAGGACCAAGTCGGACTTAATTTGTCGGTTCCATGACATGTA
CATAACAACCATCCAAGGGTGCATGTACAAGGCCAGCCCTCCGTTCGGGG
TATTCGATAACCGGGAGGATGCCTTGATAGAGCTGAAGAAGCAGATGAAA
TTGCTGGAGGGGATGGTGGATGGGGAAGGTCCGTTTCTGTGTGGGAAGGA
GAAGAGCATGGCAGACGCTACCTTGTTCTGCACGGGGGTGTTCCTCGAGC
AGATATTACCGAATCATTTCGGGTGGACGTACCAGGAGGTGTTTGGGCCC
CTCCTGACTAAATGGTGGGAGAATCTACTGGCAACAGAGTCGGCGTTTCA
GAAGgtgggagagtgcctggccctccttcctttcctccctccctccctcc
ctcccccctgcccgacctctctccctcgtgcgtattaatcatgcctttcc
aaccactatgtatgaaatagccaaattagtcatatatttccaaccacttt
gcataagaagcttcaaaaccgcaccttgcaccaccaggacgaagacctaa
acatgccaccaccgcaacaccaccaccacaacaacccacccgacagGTGC
ACTCCGAGATCATCCTGGGGATCCAAGGCTGGGAGGAGAAACGGCGGTGG
ATGACGATCCTCGGGGCTGACTTTCAGGACTTGGGGCCGGCCACCATCTT
TGACCGGATCATTAAGAAGGAGGTGCCCTCCGATGTGGTGTATGAAAACG
ACAAAGTTCTCGCGTTCCGTGACATTGCCCCCCAGGCCCCCACCCATATC
CTCGTCATTCCCAAGCGGCGTCAAGGCCTGACGTCCCTCCGCAAGGCAAC
GGAAGAACAGAAGGGCGTGCTGGGAGAAATGATGCTGGCGGTGGCCAAGA
TCGTGAGGCAGGAAGGGATCGAGGGAGGGTATAGGTTGGTCGTCAACGAT
GGAGAGGAGGCCGGTCAGACGGTGAATCATTTGCACATTCATATCCTGGC
GGGACGGCCTTTGAAGTGGCCTCCTGGGTAATTGAGAGGGAGGGAGGAGG
GAAGGGAGGGAGGGAGGGACGGAGGGAGGG
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protein sequence of NO13G03020.1

>NO13G03020.1-protein ID=NO13G03020.1-protein|Name=NO13G03020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=409bp
MALRGGSVLALVTIFLSVTPALGFLAPSATLSTFRCTSSKSGSTSRSHRR
SSSRTTMAAGKDATLYDFPVSNNGGRCRVVIYDKGIQDKIEIKKPDGALT
EINPQGKVPVLIDHSLNEFQIFESDTILRHLVGKYEGTGPSYLPSSLAAR
TKSDLICRFHDMYITTIQGCMYKASPPFGVFDNREDALIELKKQMKLLEG
MVDGEGPFLCGKEKSMADATLFCTGVFLEQILPNHFGWTYQEVFGPLLTK
WWENLLATESAFQKVHSEIILGIQGWEEKRRWMTILGADFQDLGPATIFD
RIIKKEVPSDVVYENDKVLAFRDIAPQAPTHILVIPKRRQGLTSLRKATE
EQKGVLGEMMLAVAKIVRQEGIEGGYRLVVNDGEEAGQTVNHLHIHILAG
RPLKWPPG*
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Synonyms
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