NO13G02990, NO13G02990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G02990 vs. NCBI_GenBank
Match: EWM23953.1 (na+ h+ antiporter [Nannochloropsis gaditana]) HSP 1 Score: 225.3 bits (573), Expect = 8.600e-55 Identity = 149/405 (36.79%), Postives = 213/405 (52.59%), Query Frame = 0 Query: 267 LTEGRLRLLTVLKHVYSSSFHSGLLSPDGLRAFERNLSLLLTHPDLPLNEWAGLEGHILLPLRAVQAHERWRKLPLIGRGITYMLFERLAFFFELAVVFIEAHSSLYLRLSELFGRDGPVTRYLEGEVEEEVRRAKAALNEFLPVFPDIINSVKIEMSARFLLHKMRSLLEAAVECGSMEKREFENAIREVDSSMVKLYDHSHTEAPPSRSSLLSTLSFLRFLPPHQRDLLFSSPSSPYCR---DVFVRSDTCFLPSTSSSSLPPSPLPGWYVILRGSVLXXXXXXXXXXXXXSILQNGSVLGYVESLVQSPSIMPVRSSYVAASFVHLLYFDRNLLMAEAGRRWREGGREGEGGELLRSMWWVVAALELRREGGGQGGLGLDKCSLAQLAGLLAEAVLLHVPEG 669 L R+++LTVLKH+Y ++FHSGLLS +G +A E+NL L+ P LNEW LE I +PL A++ +R + +I LF RLAF F LAV FI+AH SL L ++ G GP T LE EV E+ A+ + +LP++P+ NSVK E++ +L RSLLE + E G + +R + A+ + + L HSH+E PS +S+LS + FLRFLP Q + LF P R DV+VR++ L GWYV++RG V IL GS LG VESL+ V YV + HLL+FD+ ++ EA + LL+S+WW VA ELR+ + ++ ++ LLA+A + V +G Sbjct: 798 LKRARVQVLTVLKHLYGANFHSGLLSNEGYQALEKNLYKLILDPGCELNEWRTLEREIWIPLNALRLAKRLSRSAIIRPLANSFLFSRLAFLFGLAVNFIKAHRSLAEDLGKILGA-GPTTTILEQEVWREIEDAQRTIEMYLPIYPNTFNSVKTEIATSVVLQHFRSLLEESHEMGILHERRYHKAVEACNDATNALSAHSHSEHAPSYASVLSAVGFLRFLPSQQLEELFLEPKPGKRRLFADVYVRANRKLLKRGLQGE--GGLGGGWYVVVRGVVAVGDV----------ILPQGSTLGLVESLLGE----EVAEDYVTTTLTHLLFFDQAAILQEAESNFL----------LLKSLWWYVAVQELRQYE------SYEDLNVGEVGELLADAHFVQVVDG 1169
BLAST of NO13G02990 vs. NCBI_GenBank
Match: EWM21964.1 (cyclic nucleotide-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 209.9 bits (533), Expect = 3.800e-50 Identity = 103/148 (69.59%), Postives = 130/148 (87.84%), Query Frame = 0 Query: 312 LPLNEWAGLEGHILLPLRAVQAHERWRKLPLIGRGITYMLFERLAFFFELAVVFIEAHSSLYLRLSELFGRDGPVTRYLEGEVEEEVRRAKAALNEFLPVFPDIINSVKIEMSARFLLHKMRSLLEAAVECGSMEKREFENAIREVDS 460 +PLNEWAGLE HIL PLRAV+A R R+LPL+GR + Y+L ++LAFFFELAVVFI++HS+ + +L+ELFG++GPVTR LE EVEEEV +AKAAL EF+PVFPDIINSVK EM+AR++L+K RS+LEAA+E GS+EKREFE+AIREV + Sbjct: 5 VPLNEWAGLEHHILFPLRAVRAQARLRRLPLVGRAVQYLLGKKLAFFFELAVVFIQSHSNAHKKLNELFGKNGPVTRQLEKEVEEEVGKAKAALEEFVPVFPDIINSVKTEMAARYMLNKCRSMLEAAMESGSLEKREFEDAIREVSA 152
BLAST of NO13G02990 vs. NCBI_GenBank
Match: CBJ26919.1 (Sodium/hydrogen exchanger family [Ectocarpus siliculosus]) HSP 1 Score: 117.1 bits (292), Expect = 3.300e-22 Identity = 110/410 (26.83%), Postives = 164/410 (40.00%), Query Frame = 0 Query: 267 LTEGRLRLLTVLKHVYSSSFHSGLLSPDGLRAFERNLSLLLTHPDLPLNEWAGLEGHILLPLRAVQAHERWRKLPLIGRGITYMLFERLAFFFELAVVFIEAHSSLYLRLSELFGRDGPVTRYLEGEVEEEVRRAKAALNEFLPVFPDIINSVKIEMSARFLLHKMRSLLEAAVECGSMEKREFENAIREVDSSMVKLYDHSHTEAPPSRSSLLSTLSFLRFLPPHQRDLLFSSPSSPYCRDVFVRSDTCFLPSTS--SSSLPPSPLPGWYVILRGSVLXXXXXXXXXXXXXS---------------------------------------ILQNGSVLGYVESLVQSPSIMPVRSSYVAASFVHLLYFDRNLLMAEAGRRWREGGREGEGGELLRSMWWVVAALELRR 636 L E RLR + +K Y +F G LS GLR N + L L EWA L +P + R LP+IG+ + +F++LAF FELA FI AH + + EL +G L E +++ A L LP FP E++ARFLL K R + G + ++E E + +KL DH + E P R+ +L+ + FL+ L Q ++ +C++ S+ L + S GWY I+RGSV + L G+V G +S++ +P R++Y + SFVHL +FDR + EA +L RS+W V LR+ Sbjct: 830 LAEARLRFVGAVKANYQDNFRKGWLSDSGLRVLMGNADVQLDDSYAALEEWARLRESFTIPEYQLNMASALRHLPIIGQIVGGWIFKKLAFVFELASNFIAAHED--IDILELL-PEGDAANQLARENLKQLDDASGTLGHQLPAFP--------EVAARFLLAKHREFVHEMFLDGLLNEKEAETTLHVNTEFKIKLDDHPYAEHLPPRAVMLAKVPFLKSLSEDQ--VVQVVNDDRFCQEELHGSNVVLLRQSERVKHSGHNKGTTGWYYIVRGSVQMVTVSQERDSSSEAPHASGAGRKGGLFMGGDGHTTAAGGFEGEGGSSVKIKEHPLHAGAVFGMTDSMLG----LPFRATYTSTSFVHLFFFDRTSFLFEA----------LANEDLNRSLWRTVGVSVLRK 1212
BLAST of NO13G02990 vs. NCBI_GenBank
Match: XP_009034568.1 (hypothetical protein AURANDRAFT_22521, partial [Aureococcus anophagefferens] >EGB11008.1 hypothetical protein AURANDRAFT_22521, partial [Aureococcus anophagefferens]) HSP 1 Score: 114.8 bits (286), Expect = 1.600e-21 Identity = 71/225 (31.56%), Postives = 114/225 (50.67%), Query Frame = 0 Query: 267 LTEGRLRLLTVLKHVYSSSFHSGLLSPDGLRAFERNLSLLLTHPDLPLNEWAGLEGHILLP---LRAVQAHERWRKLPLIGRGITYMLFERLAFFFELAVVFIEAHSSL-YLRLSELFGRDGPVTRYLEGEVEEEVRRAKAALNEFLPVFPDIINSVKIEMSARFLLHKMRSLLEAAVECGSMEKREFENAIREVDSSMVKLYDHSHTEAPPSRSSLLSTLSFLR 488 L E R R L +K Y +F G L+P GLR N+ + PL+EW LE H L P L +Q + + + ++F R+AF FE+A FI AH + + +E GPV L EV + AKA + E++ VFP+ N++K +++A F+L + L++ + E G + +E R ++++ +KL H +TE P +L+ + FLR Sbjct: 495 LAESRARCLWAIKANYHVAFTHGRLTPHGLRVLVENVDMQTDDESRPLDEWERLEAHDLWPKARLSRIQYLNTYIPSERVRESVQGVIFRRMAFVFEVAYNFIHAHEDVEHALAAEEIVDAGPVQEALVEEVAKMQAMAKATIAEYIDVFPESANAIKTQVAASFVLVRQHELMKESREHGHITAKELGECERHINAARIKLSQHPYTEQMPPIKTLVRDVPFLR 719
BLAST of NO13G02990 vs. NCBI_GenBank
Match: CBJ34146.1 (cyclic nucleotide-binding protein [Ectocarpus siliculosus]) HSP 1 Score: 104.4 bits (259), Expect = 2.200e-18 Identity = 77/265 (29.06%), Postives = 131/265 (49.43%), Query Frame = 0 Query: 351 LFERLAFFFELAVVFIEAHSSLYLRLSELFGRDGPVTRYLEGEVEEEVRRAKAALNEFLPVFPDIINSVKIEMSARFLLHKMRSLLEAAVECGSMEKREFENAIREVDSSMVKLYDHSHTEAPPSRSSLLSTLSFLRFLPPHQRDLLFSSPSSPYCRDVFVRSDTCFLPSTSSSSLPPSPLPGWYVILRGSV-----------LXXXXXXXXXXXXXSILQNGSVLGYVESLVQSPSIMPVRSSYVAASFVHLLYFDRNLLMAEA 605 ++ RL F FELA FI AH + + EL +GPV L E +++ A++ L++ LPVFP++ S+K ++A+++L + ++ G + RE E I E +++ VKL H + P R +LL + FLRFL ++ + ++ + C++ F S+ L + S + GW+ ++RG+V ++ G+V+G E L+Q +P R +Y ASFVHL +FD+ A A Sbjct: 1 MYRRLMFIFELASNFISAHED--VDILELL-HEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHPEVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKA--CQEEFYGSNV-VLMNAKMSFARGARRQGWFNVVRGAVRQNTEGMLGHTTMGGTQRLRRLAKERLVNAGTVVGLDEQLMQ----VPYRCTYTTASFVHLFFFDKTQTNASA 255
BLAST of NO13G02990 vs. NCBI_GenBank
Match: EWM21970.1 (salt overly sensitive 1 [Nannochloropsis gaditana]) HSP 1 Score: 81.3 bits (199), Expect = 2.000e-11 Identity = 35/48 (72.92%), Postives = 41/48 (85.42%), Query Frame = 0 Query: 20 LPPRLRNRWKRYTVKFNQHLKEGIDGEKLSAIRREVWESLLLARGVFP 68 LPPRLR+RW+ YT +FN LK GIDGE+LS IR++VWESL LARGVFP Sbjct: 574 LPPRLRHRWREYTTRFNGKLKSGIDGERLSGIRKQVWESLALARGVFP 621
BLAST of NO13G02990 vs. NCBI_GenBank
Match: WP_012500358.1 (cyclic nucleotide-binding protein [Chloroherpeton thalassium] >ACF14274.1 cyclic nucleotide-binding protein [Chloroherpeton thalassium ATCC 35110]) HSP 1 Score: 73.9 bits (180), Expect = 3.200e-9 Identity = 54/221 (24.43%), Postives = 103/221 (46.61%), Query Frame = 0 Query: 267 LTEGRLRLLTVLKHVYSSSFHSGLLSPDGLRAFERNLSLLLTHPDL-PLNEWAGLEGHILLPLRAVQAHERWRKLPLIGRGITYMLFERLAFFFELAVVFIEAHSSLYLRLSELFGRDGPVTRYLEGEVEEEVRRAKAALNEFLPVFPDIINSVKIEMSARFLLHKMRSLLEAAVECGSMEKREFENAIREVDSSMVKLYDHSHTEAPPSRSSLLSTLSFL 487 LTE R R+L K Y F G+L +R +++ L D L++W LE P + + P+IG+ + L++RLAF +++A ++ AH + L + D V L+ E+ A A+ + FP+I +++ + +AR +L+ R+ ++ E G + + E E + V+ M ++++ + P +L +S+L Sbjct: 504 LTESRRRILEAQKRSYWRQFEEGVLGQGAVRRLTEAVNIALDRDDEGSLDDWKELEHLWQFPAILT----KLQSFPVIGKMVRRTLYDRLAFGYDIARGYVVAHEEISETLESII-HDDAVAMNLQVEMNYNRGIALGAIKKLRETFPEITMAIETKTAARLILNHERNSIKKMYEGGMLNEIEKERLVAAVERRMKRIFNTPPSIELPDSREVLKQISWL 719
BLAST of NO13G02990 vs. NCBI_GenBank
Match: XP_001444657.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK77260.1 unnamed protein product (macronuclear) [Paramecium tetraurelia]) HSP 1 Score: 73.6 bits (179), Expect = 4.200e-9 Identity = 48/207 (23.19%), Postives = 97/207 (46.86%), Query Frame = 0 Query: 269 EGRLRLLTVLKHVYSSSFHSGLLSPDGLRAFERNLSLLLTHPDLPLNEWAGLEGHILLPLRAVQAHERWRKLPLIGRGITYMLFERLAFFFELAVVFIEAHSSLYLRLSELFGRDGPVTRYLEGEVEEEVRRAKAALNEFLPVFPDIINSVKIEMSARFLLHKMRSLLEAAVECGSMEKREFENAIREVDSSMVKLYDHSHTEAPPS 476 E R R+ +LK +Y F GL D +R + + L H LN W L + L +V + +++PLIG + + L F +++ F+ S + L+ F R + E+ +E+ +A+ L FP+I+ +++ + ++ +L R L+ + G ++++E++ +E+++ +V L +H PS Sbjct: 530 EVRYRIYRILKGLYYDKFEYGLCEEDTVRLLVESSDIGLDHTKAILNIWDQLYKN-FLNFSSVNFFFKVKEMPLIGPFARDYMIKHLGFVYDVTTTFLSCASEAF-HLTGTFPMSKDAIRVVMEELNKEIEKAEGYLGILNDTFPEIVRAIQTKRASHSILTHQRHYLDDTQQNGLVDEKEYQLLKKEINTRLVDLENHQFDMVLPS 734
BLAST of NO13G02990 vs. NCBI_GenBank
Match: XP_001445171.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK77774.1 unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 72.4 bits (176), Expect = 9.300e-9 Identity = 47/207 (22.71%), Postives = 96/207 (46.38%), Query Frame = 0 Query: 269 EGRLRLLTVLKHVYSSSFHSGLLSPDGLRAFERNLSLLLTHPDLPLNEWAGLEGHILLPLRAVQAHERWRKLPLIGRGITYMLFERLAFFFELAVVFIEAHSSLYLRLSELFGRDGPVTRYLEGEVEEEVRRAKAALNEFLPVFPDIINSVKIEMSARFLLHKMRSLLEAAVECGSMEKREFENAIREVDSSMVKLYDHSHTEAPPS 476 E R R+ ++K +Y F GL D +R + + L H LN W L + L +V + +++PLIG + + L F +++ F+ S + L+ F R + E+ E+ +A+ L FP+I+ +++ + ++ +L R L+ + G ++++E++ +E+++ +V L +H PS Sbjct: 543 EVRYRIYRIMKGLYYDKFEYGLCEEDTVRLLVESSDIGLDHTKAILNIWDQLYKN-FLNFSSVNFFFKVKEMPLIGPFARDYMIKHLGFVYDVTTTFLSCASEAF-HLTGSFPMSKDAVRVVMEELNREIEKAEGYLGILNDTFPEIVRAIQTKRASHSILTHQRHYLDDTQQNGLVDEKEYQLLKKEINTRLVDLENHQFEMVLPS 747
BLAST of NO13G02990 vs. NCBI_GenBank
Match: XP_004032168.1 (sodium hydrogen exchanger family protein, putative [Ichthyophthirius multifiliis] >EGR30581.1 sodium hydrogen exchanger family protein, putative [Ichthyophthirius multifiliis]) HSP 1 Score: 68.6 bits (166), Expect = 1.300e-7 Identity = 53/225 (23.56%), Postives = 98/225 (43.56%), Query Frame = 0 Query: 267 LTEGRLRLLTVLKHVYSSSFHSGLLSPDGLRAFERNLSLLLTHPDLPLNEWAGLEGHILLPLRAVQAHERWRKLPLIGRGITYMLFERLAFFFELAVVFIEAHSSLYLRLSELFGRDGPVTRYLEGEVEEEVRRAKAALNEFLPV-FPDIINSVKIEMSARFLLHKMRSLLEAAVECGSMEKREFENAIREVDSSMVKLYDHSHTEAPPSRSSLLSTLSFLRFLP 491 + E R R L LK +Y F S + L +++ + + +N W L +I P +Q + P+IG MLF ++ +++ +IEAH S + E F V Y+ E + A+ + +L + FP+I ++ + +A LL R LLE ++ G ++ ++F+ ++ +KL + + P L + F F+P Sbjct: 518 VVECRNRYLIALKGIYWIQFEKQQCSSNALLLLIESVNWDIDTQNQRMNSWEFLSNYINNPF-YIQILFYLKTWPIIGEIAGNMLFNHISHIYDVLSTYIEAHESAEEVIKE-FRIQEQVQAYIVRESYDNRLMAEEYIQNYLHISFPEISKMIQTKKAAFSLLESQRKLLEDSIRLGQIDDKQFKTVKNHIEKHQLKLDNIKPSWKSPPVKEFLKNIKFFEFIP 740 The following BLAST results are available for this feature:
BLAST of NO13G02990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02990 ID=NO13G02990|Name=NO13G02990|organism=Nannochloropsis oceanica|type=gene|length=5917bpback to top protein sequence of NO13G02990.1 >NO13G02990.1-protein ID=NO13G02990.1-protein|Name=NO13G02990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1045bpback to top Synonyms
Publications
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