NO13G02970, NO13G02970 (gene) Nannochloropsis oceanica

Overview
NameNO13G02970
Unique NameNO13G02970
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length858
Alignment locationchr13:829951..830808 -

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Properties
Property NameValue
DescriptionTestis-expressed protein 10
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:829951..830808 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR037947TEX10/Ipi1
IPR024679Ipi1_N
Homology
BLAST of NO13G02970 vs. NCBI_GenBank
Match: CDH55784.1 (uncharacterized conserved protein [Lichtheimia corymbifera JMRC:FSU:9682])

HSP 1 Score: 75.9 bits (185), Expect = 2.300e-10
Identity = 54/205 (26.34%), Postives = 84/205 (40.98%), Query Frame = 0
Query:   17 DFKKRKARVGKKAVKPANLTKVNLKAKQLYMPNQRLITSSTXXXXXXXXXXXXXXXXXXXXXXXXXELLHQCHHHHIGTRAMAMQGLRELALAHPHAALRDLSPCLDAALELLLDPEQEVRTATLACLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFLPLFATYLCSTLTHLDQSIRKDGMAWMDMLVT 222
            DFKK+K +VGKK   P N T    ++K + +PNQ +    +                         ++L Q  H++ G R  A+ GL EL  +HP      L   ++  L+LL+D +++VR A L  L+                                        +QPFLPL   Y CS ++H+ + IR D +  MD+ V+
Sbjct:   14 DFKKKKLKVGKKKALPDNYTDTTFRSKSIALPNQSITEDKS-------------RFATTSRNLTLNDVLSQLKHYNAGVRKDAISGLEELYRSHPTLITASLGQVVNGILKLLIDDDRDVRKALLGFLQ------------------------------ETFPSIKKADIQPFLPLLIIYTCSAMSHIFEDIRNDAVKLMDLWVS 175          
BLAST of NO13G02970 vs. NCBI_GenBank
Match: KFH62512.1 (hypothetical protein MVEG_11905 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 73.2 bits (178), Expect = 1.500e-9
Identity = 61/227 (26.87%), Postives = 89/227 (39.21%), Query Frame = 0
Query:   17 DFKKRKARVGKKAVKPANLTKVNLKAKQLYMPNQRLITSSTXXXXXXXXXXXXXXXXXXXXXXXXXELLHQCHHHHIGTRAMAMQGLRELALAHPHAALRDLSPCLDAALELLLDPEQEVRTATLACLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFLPLFATYLCSTLTHLDQSIRKDGMAWMDMLVTCLGTSLRSFLSRDILPNLGSLL 244
            DFKK K +VGKK     + T  + K++ + +P+Q +    T                         EL+ Q  H+  GTR  A+ GLR+L   H H     L   +++ + LL+D    VR A    L                                         + PFLPL   Y CS +TH+ + IR+D + +MD+ V C G  + +     ILPN  SLL
Sbjct:   15 DFKKTKLKVGKKKAVADSFTDTSFKSRAISLPSQSISHDKT-------------ALLTNSRNVTFAELMTQLKHYSPGTRKDALLGLRDLFHRHSHLLPLHLGVLINSVVRLLIDDSSVVRKALQTFL------------------------------GEFVPMLHPRDIHPFLPLLIVYTCSAMTHILEDIREDALKFMDIWVACGGQVVVNGFWDKILPNYISLL 198          
BLAST of NO13G02970 vs. NCBI_GenBank
Match: XP_018287045.1 (hypothetical protein PHYBLDRAFT_188547 [Phycomyces blakesleeanus NRRL 1555(-)] >OAD69005.1 hypothetical protein PHYBLDRAFT_188547 [Phycomyces blakesleeanus NRRL 1555(-)])

HSP 1 Score: 72.0 bits (175), Expect = 3.300e-9
Identity = 60/227 (26.43%), Postives = 91/227 (40.09%), Query Frame = 0
Query:   17 DFKKRKARVGKKAVKPANLTKVNLKAKQLYMPNQRLITSSTXXXXXXXXXXXXXXXXXXXXXXXXXELLHQCHHHHIGTRAMAMQGLRELALAHPHAALRDLSPCLDAALELLLDPEQEVRTATLACLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFLPLFATYLCSTLTHLDQSIRKDGMAWMDMLVTCLGTSLRSFLSRDILPNLGSLL 244
            DFKK+K +VGKK     N T  + K+K + +PNQ +    +                         +LL +  H++ G R  A+  +R+L   +P   +  LS  +++ L L +D E++VR A L+ LR                                        LQPFLPL   Y CS +TH+ + IR D +  +D+ V      L S     +  N  SLL
Sbjct:   14 DFKKKKLKVGKKKTVADNFTDTSFKSKTISLPNQSINEDKS-------------RETTTTRNLTLADLLVKLKHYNSGVRKEALLNMRDLCSDNPQILVSSLSTVVNSVLRLFMDDERDVRKALLSFLR------------------------------DCFEPIDKIELQPFLPLLVIYTCSAMTHIFEDIRLDAIRLIDLWVDIAPEVLVSKFWDTVANNYLSLL 197          
BLAST of NO13G02970 vs. NCBI_GenBank
Match: XP_021880462.1 (hypothetical protein BCR41DRAFT_94567 [Lobosporangium transversale] >ORZ13381.1 hypothetical protein BCR41DRAFT_94567 [Lobosporangium transversale])

HSP 1 Score: 72.0 bits (175), Expect = 3.300e-9
Identity = 62/227 (27.31%), Postives = 86/227 (37.89%), Query Frame = 0
Query:   17 DFKKRKARVGKKAVKPANLTKVNLKAKQLYMPNQRLITSSTXXXXXXXXXXXXXXXXXXXXXXXXXELLHQCHHHHIGTRAMAMQGLRELALAHPHAALRDLSPCLDAALELLLDPEQEVRTATLACLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFLPLFATYLCSTLTHLDQSIRKDGMAWMDMLVTCLGTSLRSFLSRDILPNLGSLL 244
            DFKK K +VGKK     N T  + KAK + +P+Q +    T                         EL+ Q  H+  G R  A+ GLR+L   HPH     L   ++A + LL+D    VR      L                                         + PFLPL   Y CS +TH+ + IR+D + +MD+ V   G  +       I+PN  SLL
Sbjct:   15 DFKKTKLKVGKKKAVADNFTDTSFKAKAISLPSQSITHDKT-------------TLLTNSRNATFAELITQLKHYSPGNRKDAILGLRDLFDHHPHLLSLHLGVLVNAIVRLLIDDSSIVRKTLQNFL------------------------------SEFIPMLHPRDVHPFLPLLVVYTCSAMTHILEDIREDALKFMDLWVAAGGQIVVDGFWDKIIPNYVSLL 198          
BLAST of NO13G02970 vs. NCBI_GenBank
Match: GAN07650.1 (testis-expressed sequence 10 protein [Mucor ambiguus])

HSP 1 Score: 71.6 bits (174), Expect = 4.400e-9
Identity = 50/204 (24.51%), Postives = 85/204 (41.67%), Query Frame = 0
Query:   17 DFKKRKARVGKKAVKPANLTKVNLKAKQLYMPNQRLITSSTXXXXXXXXXXXXXXXXXXXXXXXXXELLHQCHHHHIGTRAMAMQGLRELALAHPHAALRDLSPCLDAALELLLDPEQEVRTATLACLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFLPLFATYLCSTLTHLDQSIRKDGMAWMDMLV 221
            DFKK+K +VGK+   P N T  + K+K + +PNQ +    +                         +L+ Q  H++ G +  A+ GL ++  +HP   +  L   ++  L+L +D +++VR ATL  L+                                        LQPF+PL   Y CS +TH+ + +R D +  MD+ +
Sbjct:   14 DFKKKKLKVGKQKSVPDNFTDTSFKSKSISLPNQSINEDKS-------------HEITTSRNLTLADLVVQLKHYNAGVKKEALSGLTDICHSHPALLVSSLGLVVNGVLKLFVDDDRDVRKATLNYLK------------------------------STFVDIDRVELQPFMPLLIIYTCSAMTHIFEDVRLDAVKLMDLWI 174          
BLAST of NO13G02970 vs. NCBI_GenBank
Match: OAD02273.1 (hypothetical protein MUCCIDRAFT_111644 [Mucor circinelloides f. lusitanicus CBS 277.49])

HSP 1 Score: 71.6 bits (174), Expect = 4.400e-9
Identity = 50/204 (24.51%), Postives = 85/204 (41.67%), Query Frame = 0
Query:   17 DFKKRKARVGKKAVKPANLTKVNLKAKQLYMPNQRLITSSTXXXXXXXXXXXXXXXXXXXXXXXXXELLHQCHHHHIGTRAMAMQGLRELALAHPHAALRDLSPCLDAALELLLDPEQEVRTATLACLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFLPLFATYLCSTLTHLDQSIRKDGMAWMDMLV 221
            DFKK+K +VGK+   P N T  + K+K + +PNQ +    +                         +L+ Q  H++ G +  A+ GL ++  +HP   +  L   ++  L+L +D +++VR ATL  L+                                        LQPF+PL   Y CS +TH+ + +R D +  MD+ +
Sbjct:   14 DFKKKKLKVGKQKSVPDNFTDTSFKSKSISLPNQSINEDKS-------------HEITTSRNLTLADLVVQLKHYNAGVKKEALSGLTDICHSHPALLVSSLGLVVNGVLKLFVDDDRDVRKATLNYLK------------------------------STFVDIDRVELQPFMPLLIIYTCSAMTHIFEDVRLDAVKLMDLWI 174          
BLAST of NO13G02970 vs. NCBI_GenBank
Match: CDS12955.1 (hypothetical protein LRAMOSA05139 [Lichtheimia ramosa])

HSP 1 Score: 71.2 bits (173), Expect = 5.700e-9
Identity = 55/209 (26.32%), Postives = 85/209 (40.67%), Query Frame = 0
Query:   17 DFK----KRKARVGKKAVKPANLTKVNLKAKQLYMPNQRLITSSTXXXXXXXXXXXXXXXXXXXXXXXXXELLHQCHHHHIGTRAMAMQGLRELALAHPHAALRDLSPCLDAALELLLDPEQEVRTATLACLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFLPLFATYLCSTLTHLDQSIRKDGMAWMDMLVT 222
            DFK    K+K +VGKK   P N T  + ++K + +PNQ +    +                         ++L Q  H++ G R  A+ GL EL  +HP      L   ++  L+LL+D +++VR A L  L+                                        LQPFLPL   Y CS ++H+ + IR D +  MD+ V+
Sbjct:   14 DFKACRLKKKLKVGKKKALPDNYTDTSFRSKSIALPNQSITEDKS-------------RFATTSRNLTLNDVLSQLKHYNAGVRKDAISGLEELYRSHPTLITASLGQVVNGILKLLIDDDRDVRKALLGFLQ------------------------------ETFPEIKIADLQPFLPLLIIYTCSAMSHIFEDIRNDAVKLMDLWVS 179          
BLAST of NO13G02970 vs. NCBI_GenBank
Match: OAQ25160.1 (hypothetical protein K457DRAFT_788029 [Mortierella elongata AG-77])

HSP 1 Score: 71.2 bits (173), Expect = 5.700e-9
Identity = 61/227 (26.87%), Postives = 88/227 (38.77%), Query Frame = 0
Query:   17 DFKKRKARVGKKAVKPANLTKVNLKAKQLYMPNQRLITSSTXXXXXXXXXXXXXXXXXXXXXXXXXELLHQCHHHHIGTRAMAMQGLRELALAHPHAALRDLSPCLDAALELLLDPEQEVRTATLACLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFLPLFATYLCSTLTHLDQSIRKDGMAWMDMLVTCLGTSLRSFLSRDILPNLGSLL 244
            DFKK K +VGKK     + T  + K+K + +P+Q +    T                         EL+ Q  H+  GTR  A+ GLR+L   HPH     L   +++ + LL+D    VR A    L                                         + PFLPL   Y CS +TH+   IR+D + +MD+ V   G  + +     I+PN  SLL
Sbjct:   15 DFKKTKLKVGKKKAVADSFTDTSFKSKAISLPSQSISHDKT-------------ALLTNSRNVTFAELMTQLKHYSPGTRKDALLGLRDLFHRHPHLLPLHLGVLVNSVVRLLIDDSGVVRKALQNFL------------------------------GEFIPMLHARDIHPFLPLLIVYTCSAMTHILDDIREDALKFMDLWVAAGGQVVVNGFWDKIIPNYVSLL 198          
BLAST of NO13G02970 vs. NCBI_GenBank
Match: EPB90514.1 (hypothetical protein HMPREF1544_02723 [Mucor circinelloides f. circinelloides 1006PhL])

HSP 1 Score: 70.1 bits (170), Expect = 1.300e-8
Identity = 54/227 (23.79%), Postives = 92/227 (40.53%), Query Frame = 0
Query:   17 DFKKRKARVGKKAVKPANLTKVNLKAKQLYMPNQRLITSSTXXXXXXXXXXXXXXXXXXXXXXXXXELLHQCHHHHIGTRAMAMQGLRELALAHPHAALRDLSPCLDAALELLLDPEQEVRTATLACLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFLPLFATYLCSTLTHLDQSIRKDGMAWMDMLVTCLGTSLRSFLSRDILPNLGSLL 244
            DFKK+K +VGK+   P + T  + K+K + +PNQ +    +                         +L+ Q  H++ G +  A+ GL ++  +HP   +  L   ++  L+L +D +++VR ATL  L+                                        LQPF+PL   Y CS +TH+ + +R D +  MD+ +      + S     +  N  SLL
Sbjct:   14 DFKKKKLKVGKQKSVPDSFTDTSFKSKSISLPNQSINEDKS-------------HEITTSRNLTLADLVVQLKHYNAGVKKEALSGLTDICNSHPALLVSSLGLVVNGVLKLFVDDDRDVRKATLNYLK------------------------------STFVDIDRVELQPFMPLLIIYTCSAMTHIFEDVRLDAVKLMDLWIQIAPDVIVSKFWNRVTGNYMSLL 197          
BLAST of NO13G02970 vs. NCBI_GenBank
Match: PRW33261.1 (Testis-expressed sequence 10 [Chlorella sorokiniana])

HSP 1 Score: 69.7 bits (169), Expect = 1.700e-8
Identity = 60/231 (25.97%), Postives = 90/231 (38.96%), Query Frame = 0
Query:   17 DFKKRKARVGKKAVKPANLTKVNLKAKQLYMPNQRLITSSTXXXXXXXXXXXXXXXXXXXXXXXXXELLHQCHHHHIGTRAMAMQGLRELALAHPHAALRDLSPCLDAALELLLDPEQEVRTATLACLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFLPLFATYLCSTLTHLDQSIRKDGMAWMDMLVTCLGTSLRSFLS--RDILPNLGSLLEK 246
            DFKK K +VGKK  +  N T  N K++ + +  Q +                              ELL QC H+    R  A+QGL +L  AHP    R  +  ++AA E + D E  VRTA    L                                         L PF+PL   ++C+ +THL + IR D + ++++L+ C    + S  +    +L + G LL K
Sbjct:   17 DFKKVKHKVGKKLPRAQNQTDTNFKSRTISLAQQSMAVD-------------REGQAVSTRNLTLKELLGQCGHYSERVRKDALQGLGQLLAAHPEELRRHATLVMEAAAERISDGEAAVRTALRELL-----------------------------SSTLFPALGPASLAPFVPLLMAHICAAMTHLAEPIRADALGFLELLMGCRPDLVASSSASLAPVLQHFGDLLSK 205          
The following BLAST results are available for this feature:
BLAST of NO13G02970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CDH55784.12.300e-1026.34uncharacterized conserved protein [Lichtheimia cor... [more]
KFH62512.11.500e-926.87hypothetical protein MVEG_11905 [Mortierella verti... [more]
XP_018287045.13.300e-926.43hypothetical protein PHYBLDRAFT_188547 [Phycomyces... [more]
XP_021880462.13.300e-927.31hypothetical protein BCR41DRAFT_94567 [Lobosporang... [more]
GAN07650.14.400e-924.51testis-expressed sequence 10 protein [Mucor ambigu... [more]
OAD02273.14.400e-924.51hypothetical protein MUCCIDRAFT_111644 [Mucor circ... [more]
CDS12955.15.700e-926.32hypothetical protein LRAMOSA05139 [Lichtheimia ram... [more]
OAQ25160.15.700e-926.87hypothetical protein K457DRAFT_788029 [Mortierella... [more]
EPB90514.11.300e-823.79hypothetical protein HMPREF1544_02723 [Mucor circi... [more]
PRW33261.11.700e-825.97Testis-expressed sequence 10 [Chlorella sorokinian... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR048ncniR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02970.1NO13G02970.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02970.1NO13G02970.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02970 ID=NO13G02970|Name=NO13G02970|organism=Nannochloropsis oceanica|type=gene|length=858bp
ATGGGCGTCAAACGCCCGGGCCCCCTCGCTGGGTCAGGGGGTAAGCACGA
CTTTAAGAAACGCAAGGCCCGCGTAGGGAAAAAAGCGGTTAAACCCGCCA
ACCTCACCAAAGTAAATCTCAAGGCCAAGCAACTTTACATGCCCAACCAA
CGCCTCATCACCTCGTCGACCGCCTCGTCCTCTTTCTCTTCCTCCTCCAC
CGCCTCATCCATCCCTGCCACCTCTACGACGGGCAAGACCCTGCCTGAAC
TCCTTCATCAATGCCACCACCACCACATCGGCACGCGAGCCATGGCGATG
CAAGGACTAAGAGAACTGGCCCTCGCACATCCCCACGCCGCCCTTCGTGA
CCTCTCCCCCTGCCTGGACGCGGCCCTTGAGCTCTTGCTCGATCCGGAGC
AGGAAGTACGCACAGCCACCCTGGCTTGCCTGCGTGTCCTCCTCCTCCTC
CCTCAGACCACCCAACAGCACCAGCAGCTGCAACAACTGCTAGGAGGAGG
AGGAGTAGGAGAAGCAGCAGCGGCATCACGCACCCCCACCACGACGGCAA
CGACCCTGCAGCCTTTTCTCCCTCTTTTTGCAACGTACTTGTGTAGTACT
TTGACTCACTTGGACCAGAGTATACGTAAGGACGGGATGGCATGGATGGA
TATGTTGGTCACGTGCCTCGGGACTAGTTTACGGTCTTTTTTAAGTCGGG
ATATATTGCCCAACCTCGGTTCGTTGTTGGAGAAACCGCCTTTGCCGAGC
AAGAGGAAGGCGGCGAGATTATTGCTGGTGCAACAGGGGAAGGAGGCGTC
GGGGGGGGAGGGGGGAGGAAGGCGAAGGAGGGGGGTATGGGAGGGAAGGA
TCAGGTGA
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protein sequence of NO13G02970.1

>NO13G02970.1-protein ID=NO13G02970.1-protein|Name=NO13G02970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=286bp
MGVKRPGPLAGSGGKHDFKKRKARVGKKAVKPANLTKVNLKAKQLYMPNQ
RLITSSTASSSFSSSSTASSIPATSTTGKTLPELLHQCHHHHIGTRAMAM
QGLRELALAHPHAALRDLSPCLDAALELLLDPEQEVRTATLACLRVLLLL
PQTTQQHQQLQQLLGGGGVGEAAAASRTPTTTATTLQPFLPLFATYLCST
LTHLDQSIRKDGMAWMDMLVTCLGTSLRSFLSRDILPNLGSLLEKPPLPS
KRKAARLLLVQQGKEASGGEGGGRRRRGVWEGRIR*
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Synonyms
Publications