NO13G02930, NO13G02930 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G02930 vs. NCBI_GenBank
Match: EWM21955.1 (TLDc [Nannochloropsis gaditana]) HSP 1 Score: 211.1 bits (536), Expect = 1.000e-50 Identity = 105/136 (77.21%), Postives = 117/136 (86.03%), Query Frame = 0 Query: 499 MYLNLKGFSLPHGLGVGGSIDGGFRLWIPESLDGCVAGTRDGTFEWGPLGGGGGRGMDGGREGEFDMEGLEVWGVGGEERIGAAVSAQGHARDLRAEIIAKARKVDKSKFLDNEFDKEFLLGKTFGHGKREQMGRD 635 MYLNLKGFSLPHGLGVGGS+D GFRLWIPESL+GCVAG RD +F WGPL G G G GGREGEF+MEGLEVWGVGGEE I AA +AQG AR + A+ IA+AR+VDKSKF+DN+FDKEFLLGKTFG GKRE+ GRD Sbjct: 1 MYLNLKGFSLPHGLGVGGSVDTGFRLWIPESLEGCVAGDRDASFAWGPLAGKTGGG-KGGREGEFEMEGLEVWGVGGEEAIEAACNAQGEARQMMADNIARARRVDKSKFVDNDFDKEFLLGKTFGQGKRERRGRD 135
BLAST of NO13G02930 vs. NCBI_GenBank
Match: XP_002999247.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY69393.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 209.9 bits (533), Expect = 2.300e-50 Identity = 129/294 (43.88%), Postives = 173/294 (58.84%), Query Frame = 0 Query: 334 SFDEFYVWATESFPLLYQPFAAFMYSRLFANCEMGVPPLPLPPSLRLALPELLSRSYILSSEHSLFGLALASPYLQGAWTRLYTSEENGLSFNRICHHILGYRGPTVLLLRDTTGAVFGFFTNDTWKESNSFFGSSECFLFRLSPSFVEIRPKASGHGQGGAKHYMYLNLKGFSLPHGLGVGGSIDGGFRLWIPESLD-GCVAGTRDGTFEWGPLGGGGGRGMDGGREGEFDMEGLEVWGVGGEERIGAAVSAQGHARDLRAEIIAKARKVDKSKFLDNEFDKEFLLGKTFGHG 627 S D+F W FPLLY F ++M + F + PS P+L S ILS H L+ + LQ +RLYTS ++GLSFNR+ +HILGY GPT+ ++RDT GAVFG F + WKES+ ++G + CFLFRL+P R ASG + +YMYLN KGF+LP GLG+GGS D FRL++ E LD + +FE G L G +F ++ +EVWG GGEE + + + H R A++I +ARKVDK++F+ N+FDKE LGKTFGHG Sbjct: 179 SSDDFVRWIGSQFPLLYTIFMSWMARKSFESL--------TKPSYE--APQLSHTSGILSRSH-FVALSTVTTSLQTPLSRLYTSAQDGLSFNRLSYHILGYSGPTLTIIRDTQGAVFGMFCDTEWKESSRYYGGNGCFLFRLAPEIAIYRVSASGANE----NYMYLNSKGFALPRGLGMGGSTD-KFRLFLSEDLDENSYTTAKCLSFEPGRLSSG----------EQFVIDAMEVWGCGGEE---SDLRQKAH-RQETADLINRARKVDKAQFVGNDFDKEMFLGKTFGHG 442
BLAST of NO13G02930 vs. NCBI_GenBank
Match: ETK89353.1 (hypothetical protein L915_06574 [Phytophthora parasitica] >ETM49126.1 hypothetical protein L914_06486 [Phytophthora parasitica] >ETO78088.1 hypothetical protein F444_06769 [Phytophthora parasitica P1976] >ETP47187.1 hypothetical protein F442_06737 [Phytophthora parasitica P10297]) HSP 1 Score: 209.5 bits (532), Expect = 3.000e-50 Identity = 126/294 (42.86%), Postives = 172/294 (58.50%), Query Frame = 0 Query: 334 SFDEFYVWATESFPLLYQPFAAFMYSRLFANCEMGVPPLPLPPSLRLALPELLSRSYILSSEHSLFGLALASPYLQGAWTRLYTSEENGLSFNRICHHILGYRGPTVLLLRDTTGAVFGFFTNDTWKESNSFFGSSECFLFRLSPSFVEIRPKASGHGQGGAKHYMYLNLKGFSLPHGLGVGGSIDGGFRLWIPESLD-GCVAGTRDGTFEWGPLGGGGGRGMDGGREGEFDMEGLEVWGVGGEERIGAAVSAQGHARDLRAEIIAKARKVDKSKFLDNEFDKEFLLGKTFGHG 627 S D+F W FPLLY F ++M + F + P+L +S ILS + L+ + LQ +RLYTS ++GLSFNR+ +HILGY GPT+ ++RDT GAVFG F + WKES+ ++G + CFLFRL+P R ASG + +YMYLN KGF+LP GLG+GGS D FRL++ E LD + +FE G L +F ++ +EVWG GGEE + +S + H R A++I +ARKVDK++F+ N+FDKE LGKTFGHG Sbjct: 179 SSDDFVRWVGAQFPLLYTIFMSWMARKCFESL----------TKASYEAPQLSHKSGILSRSY-FVALSTVTTSLQTPLSRLYTSAQDGLSFNRLSYHILGYSGPTLTIIRDTQGAVFGMFCDTEWKESSRYYGGNGCFLFRLAPEIAIYRVSASGANE----NYMYLNSKGFALPRGLGMGGSTD-KFRLFLSEDLDENSYTTAKCLSFEPGRLSS----------SEQFVIDAMEVWGCGGEE---SELSQKAH-RQETADLINRARKVDKAQFVGNDFDKEMFLGKTFGHG 442
BLAST of NO13G02930 vs. NCBI_GenBank
Match: ETL95932.1 (hypothetical protein L917_06383 [Phytophthora parasitica]) HSP 1 Score: 209.5 bits (532), Expect = 3.000e-50 Identity = 126/294 (42.86%), Postives = 172/294 (58.50%), Query Frame = 0 Query: 334 SFDEFYVWATESFPLLYQPFAAFMYSRLFANCEMGVPPLPLPPSLRLALPELLSRSYILSSEHSLFGLALASPYLQGAWTRLYTSEENGLSFNRICHHILGYRGPTVLLLRDTTGAVFGFFTNDTWKESNSFFGSSECFLFRLSPSFVEIRPKASGHGQGGAKHYMYLNLKGFSLPHGLGVGGSIDGGFRLWIPESLD-GCVAGTRDGTFEWGPLGGGGGRGMDGGREGEFDMEGLEVWGVGGEERIGAAVSAQGHARDLRAEIIAKARKVDKSKFLDNEFDKEFLLGKTFGHG 627 S D+F W FPLLY F ++M + F + P+L +S ILS + L+ + LQ +RLYTS ++GLSFNR+ +HILGY GPT+ ++RDT GAVFG F + WKES+ ++G + CFLFRL+P R ASG + +YMYLN KGF+LP GLG+GGS D FRL++ E LD + +FE G L +F ++ +EVWG GGEE + +S + H R A++I +ARKVDK++F+ N+FDKE LGKTFGHG Sbjct: 179 SSDDFVRWVGAQFPLLYTIFMSWMARKCFESL----------TKASYEAPQLSHKSGILSRSY-FVALSTVTTSLQTPLSRLYTSAQDGLSFNRLSYHILGYSGPTLTIIRDTQGAVFGMFCDTEWKESSRYYGGNGCFLFRLAPEIAIYRVSASGANE----NYMYLNSKGFALPRGLGMGGSTD-KFRLFLSEDLDENSYTTAKCLSFEPGRLSS----------SEQFVIDAMEVWGCGGEE---SELSQKAH-RQETADLINRARKVDKAQFVGNDFDKEMFLGKTFGHG 442
BLAST of NO13G02930 vs. NCBI_GenBank
Match: XP_008892305.1 (hypothetical protein PPTG_02791 [Phytophthora parasitica INRA-310] >ETN23107.1 hypothetical protein PPTG_02791 [Phytophthora parasitica INRA-310]) HSP 1 Score: 209.5 bits (532), Expect = 3.000e-50 Identity = 126/294 (42.86%), Postives = 172/294 (58.50%), Query Frame = 0 Query: 334 SFDEFYVWATESFPLLYQPFAAFMYSRLFANCEMGVPPLPLPPSLRLALPELLSRSYILSSEHSLFGLALASPYLQGAWTRLYTSEENGLSFNRICHHILGYRGPTVLLLRDTTGAVFGFFTNDTWKESNSFFGSSECFLFRLSPSFVEIRPKASGHGQGGAKHYMYLNLKGFSLPHGLGVGGSIDGGFRLWIPESLD-GCVAGTRDGTFEWGPLGGGGGRGMDGGREGEFDMEGLEVWGVGGEERIGAAVSAQGHARDLRAEIIAKARKVDKSKFLDNEFDKEFLLGKTFGHG 627 S D+F W FPLLY F ++M + F + P+L +S ILS + L+ + LQ +RLYTS ++GLSFNR+ +HILGY GPT+ ++RDT GAVFG F + WKES+ ++G + CFLFRL+P R ASG + +YMYLN KGF+LP GLG+GGS D FRL++ E LD + +FE G L +F ++ +EVWG GGEE + +S + H R A++I +ARKVDK++F+ N+FDKE LGKTFGHG Sbjct: 179 SSDDFVRWVGAQFPLLYTIFMSWMARKCFESL----------TKASYEAPQLSHKSGILSRSY-FVALSTVTTSLQTPLSRLYTSAQDGLSFNRLSYHILGYSGPTLTIIRDTQGAVFGMFCDTEWKESSRYYGGNGCFLFRLAPEIAIYRVSASGANE----NYMYLNSKGFALPRGLGMGGSTD-KFRLFLSEDLDENSYTTAKCLSFEPGRLSS----------SEQFVIDAMEVWGCGGEE---SELSQKAH-RQETADLINRARKVDKAQFVGNDFDKEMFLGKTFGHG 442
BLAST of NO13G02930 vs. NCBI_GenBank
Match: ETI49355.1 (hypothetical protein F443_06702 [Phytophthora parasitica P1569]) HSP 1 Score: 208.4 bits (529), Expect = 6.600e-50 Identity = 125/294 (42.52%), Postives = 172/294 (58.50%), Query Frame = 0 Query: 334 SFDEFYVWATESFPLLYQPFAAFMYSRLFANCEMGVPPLPLPPSLRLALPELLSRSYILSSEHSLFGLALASPYLQGAWTRLYTSEENGLSFNRICHHILGYRGPTVLLLRDTTGAVFGFFTNDTWKESNSFFGSSECFLFRLSPSFVEIRPKASGHGQGGAKHYMYLNLKGFSLPHGLGVGGSIDGGFRLWIPESLD-GCVAGTRDGTFEWGPLGGGGGRGMDGGREGEFDMEGLEVWGVGGEERIGAAVSAQGHARDLRAEIIAKARKVDKSKFLDNEFDKEFLLGKTFGHG 627 S D+F W FPLLY F ++M + F + P+L +S ILS + L+ + LQ +RLYTS ++GLSFNR+ +HILGY GPT+ ++RDT GAVFG F + WKES+ ++G + CFLFRL+P R ASG + +YMYLN KGF+LP GLG+GGS D FRL++ E LD + +FE G L +F ++ +EVWG GGEE + ++ + H R A++I +ARKVDK++F+ N+FDKE LGKTFGHG Sbjct: 178 SSDDFVRWVGAQFPLLYTIFMSWMARKCFESL----------TKASYEAPQLSHKSGILSRSY-FVALSTVTTSLQTPLSRLYTSAQDGLSFNRLSYHILGYSGPTLTIIRDTQGAVFGMFCDTEWKESSRYYGGNGCFLFRLAPEIAIYRVSASGANE----NYMYLNSKGFALPRGLGMGGSTD-KFRLFLSEDLDENSYTTAKCLSFEPGRLSS----------SEQFVIDAMEVWGCGGEE---SELNQKAH-RQETADLINRARKVDKAQFVGNDFDKEMFLGKTFGHG 441
BLAST of NO13G02930 vs. NCBI_GenBank
Match: ETL42684.1 (hypothetical protein L916_06513 [Phytophthora parasitica] >ETP19128.1 hypothetical protein F441_06705 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 208.4 bits (529), Expect = 6.600e-50 Identity = 126/294 (42.86%), Postives = 171/294 (58.16%), Query Frame = 0 Query: 334 SFDEFYVWATESFPLLYQPFAAFMYSRLFANCEMGVPPLPLPPSLRLALPELLSRSYILSSEHSLFGLALASPYLQGAWTRLYTSEENGLSFNRICHHILGYRGPTVLLLRDTTGAVFGFFTNDTWKESNSFFGSSECFLFRLSPSFVEIRPKASGHGQGGAKHYMYLNLKGFSLPHGLGVGGSIDGGFRLWIPESLD-GCVAGTRDGTFEWGPLGGGGGRGMDGGREGEFDMEGLEVWGVGGEERIGAAVSAQGHARDLRAEIIAKARKVDKSKFLDNEFDKEFLLGKTFGHG 627 S D+F W FPLLY F ++M + F + P+L +S ILS + L+ + LQ +RLYTS ++GLSFNR+ +HILGY GPT+ +RDT GAVFG F + WKES+ ++G + CFLFRL+P R ASG + +YMYLN KGF+LP GLG+GGS D FRL++ E LD + +FE G L +F ++ +EVWG GGEE + +S + H R A++I +ARKVDK++F+ N+FDKE LGKTFGHG Sbjct: 179 SSDDFVRWVGAQFPLLYTIFMSWMARKCFESL----------TKASYEAPQLSHKSGILSRSY-FVALSTVTTSLQTPLSRLYTSAQDGLSFNRLSYHILGYSGPTLTTIRDTQGAVFGMFCDTEWKESSRYYGGNGCFLFRLAPEIAIYRVSASGANE----NYMYLNSKGFALPRGLGMGGSTD-KFRLFLSEDLDENSYTTAKCLSFEPGRLSS----------SEQFVIDAMEVWGCGGEE---SELSQKAH-RQETADLINRARKVDKAQFVGNDFDKEMFLGKTFGHG 442
BLAST of NO13G02930 vs. NCBI_GenBank
Match: XP_009518922.1 (hypothetical protein PHYSODRAFT_556294 [Phytophthora sojae] >EGZ23634.1 hypothetical protein PHYSODRAFT_556294 [Phytophthora sojae]) HSP 1 Score: 204.9 bits (520), Expect = 7.300e-49 Identity = 127/294 (43.20%), Postives = 175/294 (59.52%), Query Frame = 0 Query: 334 SFDEFYVWATESFPLLYQPFAAFMYSRLFANCEMGVPPLPLPPSLRLALPELLSRSYILSSEHSLFGLALASPYLQGAWTRLYTSEENGLSFNRICHHILGYRGPTVLLLRDTTGAVFGFFTNDTWKESNSFFGSSECFLFRLSPSFVEIRPKASGHGQGGAKHYMYLNLKGFSLPHGLGVGGSIDGGFRLWIPESLDGCVAGT-RDGTFEWGPLGGGGGRGMDGGREGEFDMEGLEVWGVGGEERIGAAVSAQGHARDLRAEIIAKARKVDKSKFLDNEFDKEFLLGKTFGHG 627 S D+F W FPLLY F ++M + F + PS P+L S ILS H L+ + +Q + +RLYTS ++GLSFNR+ +HILGY GPT+ ++RDT GAVFG F + WKES+ ++G + CFLFR++P R ASG + +YMYLN KGF+LP GLG+GGS D FRL++ E LD T + +FE G L +F ++ +EVWG GGEE + +S + H R A++I +ARKVDK++F+ ++FDKE LGKTFGHG Sbjct: 184 SSDDFVRWIGSQFPLLYTIFMSWMVRKSFESL--------TKPSFE--APKLSHPSGILSRSH-FVALSTVTTSIQTSLSRLYTSAQDGLSFNRLSYHILGYSGPTLTVIRDTQGAVFGMFCDTEWKESSRYYGGNGCFLFRMAPEINIYRVSASGTNE----NYMYLNSKGFALPRGLGMGGSTD-KFRLFLSEDLDEHSYTTPKCLSFEPGRLSS----------SEQFVVDTIEVWGCGGEE---SELSQKAH-RQETADLINRARKVDKAQFVGSDFDKEMFLGKTFGHG 447
BLAST of NO13G02930 vs. NCBI_GenBank
Match: CCA14756.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 203.0 bits (515), Expect = 2.800e-48 Identity = 128/326 (39.26%), Postives = 180/326 (55.21%), Query Frame = 0 Query: 313 ASSLTSSPSEFSITE-------EEEPAVSFDEFYVWATESFPLLYQPFAAFMYSRLFANCEMGVPPLPLPPSLRLALPELLSRSYILSSEHSLFG-LALASPYLQGAWTRLYTSEENGLSFNRICHHILGYRGPTVLLLRDTTGAVFGFFTNDTWKESNSFFGSSECFLFRLSPSFVEIRPKASGHGQGGAKHYMYLNLKGFSLPHGLGVGGSIDGGFRLWIPESLD-GCVAGTRDGTFEWGPLGGGGGRGMDGGREGEFDMEGLEVWGVGGEERIGAAVSAQGHARDLRAEIIAKARKVDKSKFLDNEFDKEFLLGKTFGHGKRE 630 A+ TSS + TE V DEF W T + PL Y + +M ++ + + P L RS I+S FG L+ + +LQG R+YTS E+GLSFNR+C H+LGY G T++L++D GAVFG F + WKES+ FFG + CFLFR P + I + + G ++MYLN KGFSLP GLG+GG + FR+++ E D C + R ++E GPL + +F + LEVWG GGEE + + + H +D A++IA ARKVDK++F+ N+FDKE LG+TFGHG + Sbjct: 140 ANDTTSSSAFTEATEALTSALMSNNDLVQSDEFVQWITSTLPLFYSVISTWMSLKVLGTF----------AKVSYSAPTLTHRSEIISDPQ--FGLLSCVTTHLQGNIDRIYTSTEDGLSFNRLCFHLLGYSGQTLILIQDVQGAVFGAFCDTEWKESSRFFGGNGCFLFRFKPD-IHIYRAVTANQSG---NHMYLNTKGFSLPRGLGLGGDLT-EFRVYLNEDFDENCYSTMRCLSYESGPLSS----------QTQFSIASLEVWGCGGEE---SKLDQKAHRQD-TADMIAHARKVDKAQFIGNDFDKEMFLGRTFGHGANQ 434
BLAST of NO13G02930 vs. NCBI_GenBank
Match: XP_024579476.1 (Uncharacterized conserved protein, contains TLDc domain [Plasmopara halstedii] >CEG43107.1 Uncharacterized conserved protein, contains TLDc domain [Plasmopara halstedii]) HSP 1 Score: 201.8 bits (512), Expect = 6.200e-48 Identity = 127/295 (43.05%), Postives = 168/295 (56.95%), Query Frame = 0 Query: 333 VSFDEFYVWATESFPLLYQPFAAFMYSRLFANCEMGVPPLPLPPSLRLALPELLSRSYILSSEHSLFGLALASPYLQGAWTRLYTSEENGLSFNRICHHILGYRGPTVLLLRDTTGAVFGFFTNDTWKESNSFFGSSECFLFRLSPSFVEIRPKASGHGQGGAKHYMYLNLKGFSLPHGLGVGGSIDGGFRLWIPESLD-GCVAGTRDGTFEWGPLGGGGGRGMDGGREGEFDMEGLEVWGVGGEERIGAAVSAQGHARDLRAEIIAKARKVDKSKFLDNEFDKEFLLGKTFGHG 627 VSF EF W PLLY F ++ + F + PS P L +S ILS H L++ + LQ RLYTS ++GLSFNR+ +HILGY GPT+ ++RD GAVFG F + WKES+ ++G + CFLFRL+P R ASG + +YMYLN KG++LP GLG+GGS D FRL++ E LD + +FE G L F ++ +EVWG GG+E + Q R AE+I +ARKVDK++F+DN+FDKE LGKTFGHG Sbjct: 179 VSFIEFVQWTELQLPLLYTVFTTWIAQKCFESL--------TKPSYE--APRLSPKSEILSRSH-FVALSMVTTSLQRTLNRLYTSTQDGLSFNRLSYHILGYSGPTLTVIRDVQGAVFGMFCDTEWKESSRYYGGNGCFLFRLAPDINICRVSASGINE----NYMYLNSKGYALPRGLGMGGSTD-KFRLFLSEDLDEQSYTIAKCLSFEPGRL----------SFNEHFVIDVMEVWGCGGDE----SEHNQEKHRLETAELINRARKVDKAQFIDNDFDKETFLGKTFGHG 443 The following BLAST results are available for this feature:
BLAST of NO13G02930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02930 ID=NO13G02930|Name=NO13G02930|organism=Nannochloropsis oceanica|type=gene|length=2901bpback to top protein sequence of NO13G02930.1 >NO13G02930.1-protein ID=NO13G02930.1-protein|Name=NO13G02930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=635bpback to top Synonyms
Publications
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