NO13G02740, NO13G02740 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G02740 vs. NCBI_GenBank
Match: EWM21931.1 (nifu like protein [Nannochloropsis gaditana]) HSP 1 Score: 324.7 bits (831), Expect = 2.300e-85 Identity = 178/225 (79.11%), Postives = 187/225 (83.11%), Query Frame = 0 Query: 9 AASTFVLVCLVLVLSLAEAFLPAIPK----------TPATTRRFSSPETITSPFESGVSSGPNDDF-LPLTFENVELVLDEMRPYLMSDGGNVVISEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLREKIPEISEVIQAMPEGPALTTENIDGVLEGVRPFLMVAGGSISVKEISGLGGLQPRVLLHMEGNNQSLFSVRMEITQRILRNFMVAGLRVDWTDQ 223 AAS F L C+ L LA AFLPA K T +S +TITSPFESGV G DD LPLT ENVE+VLDEMRPYLMSDGGNVV+S+IDGPVVKLELQGACGSCPSSTMTMKMGLERRL+EKIPEISEVIQAMPEGPAL+TENID VLEGVRPFLMVAGGSISVKEISGLGGLQP VLLHMEGNNQSLFSVRMEITQRILRNFMV GLRV+WTDQ Sbjct: 23 AASAF-LTCVALFPLLAHAFLPATFKPFRAYSDASSTLVVPLSRTSTDTITSPFESGVKQGGGDDGPLPLTLENVEMVLDEMRPYLMSDGGNVVVSDIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEKIPEISEVIQAMPEGPALSTENIDQVLEGVRPFLMVAGGSISVKEISGLGGLQPLVLLHMEGNNQSLFSVRMEITQRILRNFMVPGLRVEWTDQ 246
BLAST of NO13G02740 vs. NCBI_GenBank
Match: XP_002181084.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47736.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 239.6 bits (610), Expect = 9.600e-60 Identity = 128/215 (59.53%), Postives = 154/215 (71.63%), Query Frame = 0 Query: 22 LSLAEAFLPAIPKTPATTRRFSSPETITSPFESGVSS-----------------GPNDDFLPLTFENVELVLDEMRPYLMSDGGNVVISEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLREKIPEISEVIQAMPEGPALTTENIDGVLEGVRPFLMVAGGSISVKEISGLGGLQPRVLLHMEGNNQSLFSVRMEITQRILRNFMVAGLRVDW 220 LS+A +F+P + P T + I SPF+S GP L LT++NVE VLDEMRPYL+ DGGNV+IS+IDGPVVKLELQGACG+CPSST TMKMGLER LREKIPEI EVIQAMPEGP LT+E +D VL+GVRPFL VAGGSI++ I G+ GLQP + L MEG++ SL SV++EI QR+LR+FMVAGL+V W Sbjct: 13 LSMASSFVPTAYRHPKTVGTTLLRDQIVSPFDSSERDEGSVATTELDAPPTKLVGP----LDLTWDNVEAVLDEMRPYLIQDGGNVIISDIDGPVVKLELQGACGTCPSSTQTMKMGLERGLREKIPEIQEVIQAMPEGPELTSEQVDVVLDGVRPFLQVAGGSINMDRIDGVDGLQPTIWLKMEGSSASLNSVKLEIAQRLLRHFMVAGLQVQW 223
BLAST of NO13G02740 vs. NCBI_GenBank
Match: GAX18347.1 (hypothetical protein FisN_23Hh241 [Fistulifera solaris]) HSP 1 Score: 225.7 bits (574), Expect = 1.400e-55 Identity = 123/212 (58.02%), Postives = 151/212 (71.23%), Query Frame = 0 Query: 16 VCLVLVLSLAEAFLPAIPKTPATTRR--FSSPETITSPFE------SGVSSGPNDDFLPLTFENVELVLDEMRPYLMSDGGNVVISEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLREKIPEISEVIQAMPEGPALTTENIDGVLEGVRPFLMVAGGSISVKEISGLGGLQPRVLLHMEGNNQSLFSVRMEITQRILRNFMVAGLRVDW 220 V ++L L A AF+ T RR F I SPF+ + + +D L LT+ENVELVLD MR YL+ DGGNVVISEIDGPVV+LELQGACG+CPSST TMKMGLER L+E+IPEI EV+Q MPEGP LT E I+ VL+GVRPFL VAGGSI + I G GLQP + L+M G++ SL SV++EI QR+ R+FM+AGLR++W Sbjct: 10 VAILLCLEPAAAFV----TTNGVARRPTFVRMADIISPFDDSDNKSASTKTATDDGPLDLTWENVELVLDSMRSYLIQDGGNVVISEIDGPVVRLELQGACGTCPSSTQTMKMGLERGLKERIPEIQEVVQKMPEGPELTDEQINVVLDGVRPFLQVAGGSIDIDRIEGKDGLQPAIFLNMRGSSASLNSVKLEIAQRLQRHFMMAGLRIEW 217
BLAST of NO13G02740 vs. NCBI_GenBank
Match: GAX16630.1 (hypothetical protein FisN_23Lh241 [Fistulifera solaris]) HSP 1 Score: 222.6 bits (566), Expect = 1.200e-54 Identity = 123/220 (55.91%), Postives = 152/220 (69.09%), Query Frame = 0 Query: 16 VCLVLVLSLAEAFLP--AIPKTPATTRRFSSPETITSPFE--------------SGVSSGPNDDFLPLTFENVELVLDEMRPYLMSDGGNVVISEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLREKIPEISEVIQAMPEGPALTTENIDGVLEGVRPFLMVAGGSISVKEISGLGGLQPRVLLHMEGNNQSLFSVRMEITQRILRNFMVAGLRVDW 220 V ++L L A FL +P+ T R + I SPF+ + + GP L LT+ENVELVLD MR YL+ DGGNVVISEIDGPVV+LELQGACG+CPSST TMKMGLER L+E+IPEI EV+Q MPEGP LT E I+ VL+GVRPFL VAGGSI + I G GLQP + L+M G++ SL SV++EI QR+ R+FM+AGLR++W Sbjct: 10 VAILLCLEPAAGFLTTNGLPRLAPTFVRMAD---IISPFDDSDNKSSTSSTKTATDIDKGP----LDLTWENVELVLDSMRSYLIQDGGNVVISEIDGPVVRLELQGACGTCPSSTQTMKMGLERGLKERIPEIQEVVQKMPEGPELTDEQINVVLDGVRPFLQVAGGSIDIDRIEGKDGLQPAIFLNMRGSSASLNSVKLEIAQRLQRHFMMAGLRIEW 222
BLAST of NO13G02740 vs. NCBI_GenBank
Match: CBJ30713.1 (NifU-like protein 2, chloroplast precursor (AtCNfu2) (AtCnfU-V) [Ectocarpus siliculosus]) HSP 1 Score: 221.9 bits (564), Expect = 2.100e-54 Identity = 115/189 (60.85%), Postives = 145/189 (76.72%), Query Frame = 0 Query: 37 ATTRRFSSPETITSPFESGVSSGPNDD------FLPLTFENVELVLDEMRPYLMSDGGNVVISEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLREKIPEISEVIQAMPEGPALTTENIDGVLEGVRPFLMVAGGSISVKEISGLGGLQPRVLLHMEGNNQSLFSVRMEITQRILRNFMVAGLRVDW 220 A RR SS + I SPF + + D+ L LT ENVE VLDEMRPYLMSDGGNV + EIDGPVV+LEL+GACGSCPSSTMTMKMGLERRL ++IPEISEV+Q++P GP LT EN++ VL+GVRPFL VAGGSI+++ ++G+ +QP + L M G++ SL S+RMEI QRI R FM++ LRV++ Sbjct: 87 AEPRRMSSTD-IESPFATPGMADMGDEEEDPEALLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVEF 274
BLAST of NO13G02740 vs. NCBI_GenBank
Match: XP_002286272.1 (nifU like protein [Thalassiosira pseudonana CCMP1335] >EED95913.1 nifU like protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 219.9 bits (559), Expect = 7.900e-54 Identity = 113/188 (60.11%), Postives = 142/188 (75.53%), Query Frame = 0 Query: 47 TITSPF-------ESG--------VSSGPNDDFLPLTFENVELVLDEMRPYLMSDGGNVVISEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLREKIPEISEVIQAMPEGPALTTENIDGVLEGVRPFLMVAGGSISVKEISGLGGLQPRVLLHMEGNNQSLFSVRMEITQRILRNFMVAGLRVDW 220 TI SPF ESG S G +D+ L LT+ENV++VL+EMRP+L+ DGGNV ISEIDGP+VKLELQGACG+CPSST TMKMGLER+LRE+IPEI EVIQA+P+ P L + I+ VL+ VRPFL VAGG+I V I+G GGLQP + L M G+ SL SV++EI QR+ R+FM++G+RV+W Sbjct: 49 TIVSPFDNTEDSDESGEGVATATYTSLGSDDEPLDLTWENVDMVLEEMRPFLLQDGGNVAISEIDGPIVKLELQGACGTCPSSTQTMKMGLERKLRERIPEIQEVIQALPDTPDLNEDQINIVLDSVRPFLQVAGGTIDVASITGEGGLQPTITLKMGGSAASLNSVKLEIAQRLQRHFMISGMRVEW 236
BLAST of NO13G02740 vs. NCBI_GenBank
Match: EJK65619.1 (hypothetical protein THAOC_13500 [Thalassiosira oceanica]) HSP 1 Score: 219.5 bits (558), Expect = 1.000e-53 Identity = 116/223 (52.02%), Postives = 151/223 (67.71%), Query Frame = 0 Query: 11 STFVLVCLVLVLSLAEAFLPAI-PKTPATTRRFSSPETITSPFESGVSSG-------------PNDDFLPLTFENVELVLDEMRPYLMSDGGNVVISEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLREKIPEISEVIQAMPEGPALTTENIDGVLEGVRPFLMVAGGSISVKEISGLGGLQPRVLLHMEGNNQSLFSVRMEITQRILRNFMVAGLRVDW 220 ST +C+ S+ L I P+ P T R + I SPF+ D+ L LT++NV++VLDEMRPYL+ DGGNV ISEIDGPVV+LELQG CG+CPSST TMKMGLER+L E+IPEI EV+QA+P+ P LT + I+ VL+ VRPFL VAGG+I + ISG GGLQP + L M+G+ SL SV++EI QR+ R+FM++G+RV+W Sbjct: 4 STCSFICIATACSVTSFNLARIAPQRPQTRRFGTLLRAIVSPFDDSDDEAGEVATATYTPLPTEGDEPLDLTWDNVDMVLDEMRPYLLQDGGNVAISEIDGPVVRLELQGECGTCPSSTQTMKMGLERKLMERIPEIQEVVQALPDSPDLTEDQINVVLDSVRPFLSVAGGTIDIDSISGEGGLQPTITLKMDGSAASLNSVKLEIAQRLQRHFMISGMRVEW 226
BLAST of NO13G02740 vs. NCBI_GenBank
Match: XP_005835406.1 (lysyl-tRNA synthetase [Guillardia theta CCMP2712] >EKX48426.1 lysyl-tRNA synthetase [Guillardia theta CCMP2712]) HSP 1 Score: 211.1 bits (536), Expect = 3.700e-51 Identity = 112/203 (55.17%), Postives = 148/203 (72.91%), Query Frame = 0 Query: 20 LVLSLAEAFLPAIPKTPATTRRFSSPETITSPFESGVSSGPNDDFLPLTFENVELVLDEMRPYLMSDGGNVVISEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLREKIPEISEVIQAMPE-GPALTTENIDGVLEGVRPFLMVAGGSISVKEISGLGGLQPRVLLHMEGNNQSLFSVRMEITQRILRNFMVAGLRVDWTD 222 LVL A+ L A+ T + F P E+ S D LPLT+ENVE VLD MRPYLMSDGGNV I++IDG +V+L+L+GACG+CPSSTMTMKMGLER LREKIPEI +V+Q + + GP L+ ++++ VL+ VRPFL VAGGSI + ++ G+GG+QP ++L M G + +L SV+ EI QR+ RNFM+AGLR++WTD Sbjct: 437 LVLRSAKRSLLALKDTDSIVSPFDPSVDPLLPKETEESPTDLDGPLPLTWENVEKVLDTMRPYLMSDGGNVKIADIDGGIVRLKLEGACGTCPSSTMTMKMGLERGLREKIPEIVDVVQDLGDGGPELSPDSVEKVLDTVRPFLKVAGGSIELFDLRGVGGMQPVIILKMTGTSAALRSVKNEIVQRLQRNFMLAGLRIEWTD 639
BLAST of NO13G02740 vs. NCBI_GenBank
Match: XP_005764537.1 (hypothetical protein EMIHUDRAFT_452262 [Emiliania huxleyi CCMP1516] >EOD12108.1 hypothetical protein EMIHUDRAFT_452262 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 193.7 bits (491), Expect = 6.000e-46 Identity = 108/210 (51.43%), Postives = 138/210 (65.71%), Query Frame = 0 Query: 6 SCGAASTFVLVCLVLVLSLAEAFLPAIPKTPATTRRFSSP---ETITSPFESGVSSGPN--DDFLPLTFENVELVLDEMRPYLMSDGGNVVISEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLREKIPEISEVIQAMPEGPALTTENIDGVLEGVRPFLMVAGGSISVKEISGLGGLQPRVLLHMEGNNQSLFSVRMEITQRILRNF 211 SCG + +L+ + S +PA+ P R +P + +TSPFE+ S+G LPLT ENV+ VLDEMRPYLM+DGGNV ++EIDG VV+LELQGACGSC SS MTMKMGLER LREKIPEI V Q P+GP LT + I+GVLE +RPFL +AGG + + E+ G+ P L + G+ ++ SVR EI QR+ RNF Sbjct: 3 SCGGRARCLLLLSSWLHSAGSLRVPAVSAVPRVQHRAGAPRCSDPVTSPFEASASNGGETLTGPLPLTAENVDAVLDEMRPYLMADGGNVAVAEIDGGVVRLELQGACGSCASSAMTMKMGLERGLREKIPEIIAVEQVAPDGPQLTEDGIEGVLEEIRPFLKMAGGDVELVELIET-GVAPSCTLRISGSGSTINSVRAEIAQRLKRNF 211
BLAST of NO13G02740 vs. NCBI_GenBank
Match: OSX80688.1 (hypothetical protein BU14_0033s0032 [Porphyra umbilicalis]) HSP 1 Score: 176.0 bits (445), Expect = 1.300e-40 Identity = 94/167 (56.29%), Postives = 115/167 (68.86%), Query Frame = 0 Query: 44 SPETITSPFESGVSSGPNDDFLPLTFENVELVLDEMRPYLMSDGGNVVISEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLREKIPEISEVIQAMPEGPALTTENIDGVLEGVRPFLMVAGGSISVKEISGLGGLQPRVLLHMEGNNQSLFSVRMEITQRILRNF 211 +P + E SS LPLT NVE VLDE+RPYLM+DGGNV ++EIDG V+L L+GACGSCPSS MTMKMG+ERRL E IPEI EV Q P GP LT E ++GVL VRPFL VAGG I + +++ L P V L M+G ++ SV++EITQR+ RNF Sbjct: 4 APPSTAGGAELVSSSTSPSSVLPLTLANVETVLDELRPYLMADGGNVSVAEIDGATVRLALEGACGSCPSSMMTMKMGIERRLLEAIPEIEEVCQVEPAGPPLTPEGVEGVLNEVRPFLNVAGGGIELVKMTPDSAL-PVVRLKMQGTGAAINSVKIEITQRLKRNF 169 The following BLAST results are available for this feature:
BLAST of NO13G02740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02740 ID=NO13G02740|Name=NO13G02740|organism=Nannochloropsis oceanica|type=gene|length=1035bpback to top protein sequence of NO13G02740.1 >NO13G02740.1-protein ID=NO13G02740.1-protein|Name=NO13G02740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=227bpback to top Synonyms
Publications
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