NO13G02690, NO13G02690 (gene) Nannochloropsis oceanica
|
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO13G02690 vs. NCBI_GenBank
Match: EWM21934.1 (hypothetical protein Naga_100220g2 [Nannochloropsis gaditana]) HSP 1 Score: 448.4 bits (1152), Expect = 2.100e-122 Identity = 219/335 (65.37%), Postives = 257/335 (76.72%), Query Frame = 0
Query: 12 HNAATLVLFLLLLLLHSLASYSAFIPESSVRIGKAFNRIIIPSSRAVPRAGEDAAIDVPATLYVEDPPIWPVPASLRRAESLGGGEPSYIRFLGLAKVFEARDGAKLAELFDTDSLFRHAIRVAMRDDLFVPDPTRSEKVNHFLKDLGSSLHVSWEKSPTQYANLSRVFKEYGIQGLDGVTFIKSLGALAGGGQQCEDADGFLLREQRFGSLIDIVTAGNRLKPAHSWHQDCNLPQTTVMLGFPKSNEYKGAGVFSHAIKISHQIRDQVPGGGAVVQYDEFEGVGQSDDLPNPLPESVILRPWYAKGREIMVYDDSWHIHSAPDHIHRASIWRFM 347
H L L++ LL S++ +P S V G+ +R + G+ +V T Y ED IW VP ++R E +P+Y+ FLGLA+VF+ +DG KLA+LFDTD FRHAIRVAMR+DLF+PDPTRSEKVN FLKDLGSSLHV WEKSPT YANLSRVFK+YGI LDG TFIK LG +AGGG Q +D+DGFLLR++RFGSLIDIVTAG+RLKPAHSWHQDCNLPQ TVMLGFPK++ Y G GVFSHAIK+SH ++DQVPGGG VVQYDE+EGVG+ LPN LPESVILRP Y KGREIM+YDDSWHIHSAPDHI+R S+WRFM
Sbjct: 13 HYQKRLFRMLVVFLLKSISCAFQGMP-SLVNSGRGIDRRGPHTHVTSSIRGQADTSNVLVTSYAEDAVIWDVPVGIQRGEPPSDLKPNYVTFLGLAEVFQDQDGIKLADLFDTDDGFRHAIRVAMREDLFIPDPTRSEKVNRFLKDLGSSLHVCWEKSPTGYANLSRVFKQYGIGNLDGATFIKKLGGMAGGGPQIKDSDGFLLRQKRFGSLIDIVTAGSRLKPAHSWHQDCNLPQMTVMLGFPKTSGYLGTGVFSHAIKLSHPLKDQVPGGGQVVQYDEYEGVGKDPKLPNILPESVILRPRYGKGREIMIYDDSWHIHSAPDHIYRTSVWRFM 346
BLAST of NO13G02690 vs. NCBI_GenBank
Match: XP_003064320.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH51225.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 223.0 bits (567), Expect = 1.400e-54 Identity = 120/273 (43.96%), Postives = 165/273 (60.44%), Query Frame = 0
Query: 76 EDPPIWPVPASLRRAESLGGGEPSYIRFLGLAKVFEARDGAKLAELFDTDSLFRHAIRVAMRDDLFVPDPTRSEKVNHFLKDLGSSLHVSWEKSPTQYANLSRVFKEYGIQGLDGVTFIKSLGALAGGGQQCEDADGFLLREQRFGSLIDIVTAGNRLKPAHSWHQDCNLPQTTVMLGFPKSNEYKGAGVFSHAIKISHQIR--DQVPGGGAVVQYDEFEGVGQSDDLPNPLPESVILRPWYAKGREIMVYDDSWHIHSAPDHIHRASIWRFM 347
+D ++ VP LRRA S E ++ F GL ++F G+ L E F+ + FR AIR AMR+D+FVPDP++S+K+N + LG S+ V+W++S + YA L++VF+ G++G+ G FI +LG L G + GSLIDI G R K HSWHQD L + TVMLGFP S+ + G GVFSHA K+SH +R D GAV+Q+++F+ LP VI RP Y G E+MVY D+ H+HSAPD +R S+WRFM
Sbjct: 146 DDVEVYEVPDDLRRAGSSRVEE--HVTFYGLDELF---PGSGLGETFNASAAFRTAIRAAMREDMFVPDPSKSDKINTAISSLGCSVMVNWKRSKSGYAALTKVFESNGVRGVTGEAFILALGGLCG--------------TESHGSLIDITGTGRR-KERHSWHQDSGLDRRTVMLGFPPSDGFDGVGVFSHAAKLSHPLRRADGDDAEGAVIQWEDFDA--------GELPVEVIGRPEYRPGHEVMVYCDATHVHSAPDETNRESVWRFM 390
BLAST of NO13G02690 vs. NCBI_GenBank
Match: XP_002501060.1 (predicted protein [Micromonas commoda] >ACO62318.1 predicted protein [Micromonas commoda]) HSP 1 Score: 214.5 bits (545), Expect = 5.100e-52 Identity = 119/272 (43.75%), Postives = 164/272 (60.29%), Query Frame = 0
Query: 77 DPPIWPVPASLRR--AESLGGGEPSYIRFLGLAKVFEARDGAKLAELFDTDSLFRHAIRVAMRDDLFVPDPTRSEKVNHFLKDLGSSLHVSWEKSPTQYANLSRVFKEYGIQGLDGVTFIKSLGALAGGGQQCEDADGFLLREQRFGSLIDIVTAGNRLKPAHSWHQDCNLPQTTVMLGFPKSNEYKGAGVFSHAIKISHQIRDQVPGGGAVVQYDEFEGVGQSDDLPNPLPESVILRPWYAKGREIMVYDDSWHIHSAPDHIHRASIWRFM 347
D ++ VP+ LRR AE++ +++F GL ++F + L E F+ D+ FR AIR A+RDDLFVPDP S+KVN + L SSL V+W+ S T YA+L++VF + +Q L G FI++LG L G GSLIDI + G R + HSWHQD L + TVM+GFP + + G GVFSH+ K+SH +R Q G V+Q++++E LP S I RP Y+ GRE+MVY D+ H+HSAPD +R S+WRFM
Sbjct: 58 DVEVFDVPSDLRRPGAEAV----VEHVKFFGLEELFPS---TGLQEKFNADAAFRTAIRRAIRDDLFVPDPNASDKVNAAISSLSSSLMVNWKSSRTGYASLTKVFADNAVQNLTGENFIQTLGKLCG--------------PVSHGSLIDITSTG-RKQERHSWHQDSGLDRFTVMVGFPPESNWTGVGVFSHSCKLSHPLR-QDGDEGEVIQWEDYEA--------GELPVSAIGRPEYSPGREVMVYCDATHLHSAPDETNRESVWRFM 298
BLAST of NO13G02690 vs. NCBI_GenBank
Match: XP_003081457.1 (unnamed product [Ostreococcus tauri] >CAL55979.1 unnamed product [Ostreococcus tauri]) HSP 1 Score: 186.8 bits (473), Expect = 1.100e-43 Identity = 115/275 (41.82%), Postives = 155/275 (56.36%), Query Frame = 0
Query: 76 EDPPIWPVPASLRRAESLGGGEPSYIRFLGLAKVFEARDGAKLAELFDTDSLFRHAIRVAMRDDLFVPDPTRSEKVNHFLKDLGSSLHVSWEKSPTQYANLSRVFKEYGIQGLDGVTFIKSLGALAGGGQQCEDADGFLLREQRFGSLIDIVTAGNRLKPAHSWHQDCNLPQTTVMLGFPKSNEYK----GAGVFSHAIKISHQIRDQVPGGGAVVQYDEFEGVGQSDDLPNPLPESVILRPWYAKGREIMVYDDSWHIHSAPDHIHRASIWRFM 347
ED ++ VP LRR S+ +++ L VF G+ LA+ F D FR +R+AMRDDLFVP+ SE N ++ L SS+HV+W +S T YA LS F +G+ L G FIK LGAL G E G+LIDI + G + K HSWHQD + TVMLGFP S + G GVF+HA+K+SH + Q+ G+V+Q+++F V D + + RP + +G+EIMVY DS IHSAPD HR ++WRFM
Sbjct: 92 EDARVYEVPERLRRPGSV--ENDTFVVHKSLEDVF---PGSGLADAFHGDGRFRTGVRLAMRDDLFVPNEKLSEARNATMRALSSSVHVNWFESRTGYAALSAHFARHGV-NLTGERFIKGLGALCG--------------EPCHGTLIDIASIGKQ-KIRHSWHQDSGYDRFTVMLGFPASTPSEDPPPGVGVFTHAVKLSHPL-VQLGDDGSVIQWEDF--VPYEGD----FADEYVARPVFKRGQEIMVYRDSAIIHSAPDQSHREAVWRFM 338
BLAST of NO13G02690 vs. NCBI_GenBank
Match: OUS43480.1 (hypothetical protein BE221DRAFT_194926 [Ostreococcus tauri]) HSP 1 Score: 186.8 bits (473), Expect = 1.100e-43 Identity = 115/275 (41.82%), Postives = 155/275 (56.36%), Query Frame = 0
Query: 76 EDPPIWPVPASLRRAESLGGGEPSYIRFLGLAKVFEARDGAKLAELFDTDSLFRHAIRVAMRDDLFVPDPTRSEKVNHFLKDLGSSLHVSWEKSPTQYANLSRVFKEYGIQGLDGVTFIKSLGALAGGGQQCEDADGFLLREQRFGSLIDIVTAGNRLKPAHSWHQDCNLPQTTVMLGFPKSNEYK----GAGVFSHAIKISHQIRDQVPGGGAVVQYDEFEGVGQSDDLPNPLPESVILRPWYAKGREIMVYDDSWHIHSAPDHIHRASIWRFM 347
ED ++ VP LRR S+ +++ L VF G+ LA+ F D FR +R+AMRDDLFVP+ SE N ++ L SS+HV+W +S T YA LS F +G+ L G FIK LGAL G E G+LIDI + G + K HSWHQD + TVMLGFP S + G GVF+HA+K+SH + Q+ G+V+Q+++F V D + + RP + +G+EIMVY DS IHSAPD HR ++WRFM
Sbjct: 90 EDARVYEVPERLRRPGSV--ENDTFVVHKSLEDVF---PGSGLADAFHGDGRFRTGVRLAMRDDLFVPNEKLSEARNAAMRALSSSVHVNWFESRTGYAALSAHFARHGV-NLTGERFIKGLGALCG--------------EPCHGTLIDIASIGKQ-KIRHSWHQDSGYDRFTVMLGFPASTPSEDPPPGVGVFTHAVKLSHPL-VQLGDDGSVIQWEDF--VPYEGD----FADEYVARPVFKRGQEIMVYRDSAIIHSAPDQSHREAVWRFM 336
BLAST of NO13G02690 vs. NCBI_GenBank
Match: XP_001419884.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO98177.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 184.9 bits (468), Expect = 4.300e-43 Identity = 117/296 (39.53%), Postives = 159/296 (53.72%), Query Frame = 0
Query: 57 AVPRAGEDAAIDVPATLYVEDPPIWPVPASLRRAESLGGGEPSYIRFLGLAKVFEARDGAKLAELFDTDSLFRHAIRVAMRDDLFVPDPTRSEKVNHFLKDLGSSLHVSWEKSPTQYANLSRVFKEYGIQGLDGVTFIKSLGALAGGGQQCEDADGFLLREQRFGSLIDIVTAGNRLKPAHSWHQDCNLPQTTVMLGFPKSNEYK------GAGVFSHAIKISHQIRDQVPGGGAVVQYDEFEGVGQSDDLPNPLPESVILRPWYAKGREIMVYDDSWHIHSAPDHIHRASIWRFM 347
A PRA PA +D ++ VP +LRR + ++ + L +F GA A+ F D+ FR +R AMR DLFVPD S + N + L SS+HV+W +S T YA LS +F GI+ + G FI++LG L G E R G+LIDI + K +HSWHQD + TVMLGFP + + G GVFSHA+K+SH +R P GAV+Q+ E V + D+ L + RP +A+ REI+VY DS +HSAPD HR ++WRFM
Sbjct: 41 ATPRA------RAPAYRAWDDVEVFEVPETLRRDGA--ARNERFVEHVSLEGLF----GATFADAFHDDASFRTDVRRAMRKDLFVPDENLSAEANAAMSALSSSVHVNWFESRTGYAALSALFASRGIEDVTGERFIRALGGLCG--------------EPRHGTLIDIASPVGARKISHSWHQDSGYDRLTVMLGFPAAAPSESMGLPSGVGVFSHAVKLSHALRRPSP-PGAVLQW---EDVASARDV--RLDARFVARPAFARHREIIVYRDSSILHSAPDVAHREAVWRFM 304
BLAST of NO13G02690 vs. NCBI_GenBank
Match: XP_005760114.1 (hypothetical protein EMIHUDRAFT_218205 [Emiliania huxleyi CCMP1516] >EOD07685.1 hypothetical protein EMIHUDRAFT_218205 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 169.1 bits (427), Expect = 2.400e-38 Identity = 102/282 (36.17%), Postives = 151/282 (53.55%), Query Frame = 0
Query: 79 PIWPVPASLRRAESLGGGEPSYIRFLGLAKVFEARDGAKLAELFDTDSLFRHAIRVAMRDDLFVP------DPTRSEKVNHFLKDLGSSLHVSWE-------KSPTQYANLSRVFKEYGIQGLDGVTFIKSLGALAGGGQQCEDADGFLLREQRFGSLIDIVTAGNRLKPAHSWHQDCNLPQTTVMLGFPKSNEYKGAGVFSHAIKISHQIRDQV-PGGGAVVQYDEFEGVGQSDDLPNPLPESVILRPWYAKGREIMVYDDSWHIHSAPDHIHRASIWRFM 347
P+W VP SLR + S+ R + L +F G+ LA+ +D + R A+R A+RDDL P P R+ ++ LG++ VSW + ++ + F ++G++ L G FI+SLG L G GSLIDI+ R+ AHSWHQD LP+ TV+LGFP + Y+G GVFSH +++SH +R GAVV+Y+ SD P+ + ++ +LRP Y+KGRE+ V +D+ H+HS PD R ++WRFM
Sbjct: 28 PVWAVPESLRLPGA--AAVESHGRHVSLDALF---PGSGLADAWDERASLRTAVRQALRDDLMAPLLRGVGGPKRACALS-----LGTACMVSWSNALAAHAEGKVDFSRFTAAFADHGVR-LSGEAFIRSLGELCGATPH--------------GSLIDIIPLDRRV--AHSWHQDSGLPRDTVLLGFPPRDGYEGGGVFSHCVQLSHPLRPSAGDEHGAVVEYERL-----SDPPPDRIDDAFVLRPLYSKGREVWVSNDAHHLHSTPDRQLREAVWRFM 277
BLAST of NO13G02690 vs. NCBI_GenBank
Match: XP_007510332.1 (predicted protein [Bathycoccus prasinos] >CCO18677.1 predicted protein [Bathycoccus prasinos]) HSP 1 Score: 165.6 bits (418), Expect = 2.700e-37 Identity = 113/283 (39.93%), Postives = 156/283 (55.12%), Query Frame = 0
Query: 78 PPIWPVPASLRRAE--SLGGGEPSYIRFLGLAKVFEARDGAKLAELFDTDSLFRHAIRVAMRDDLFVPDPTRSEKVNHFLKDLGSSLHVSWEKSP--TQYANLSRVFKEYGIQGLDGVTFIKSLGALAGGGQQCEDADGFLLREQRFGSLIDIVT-AGNRLKPAHSWHQDCNL-PQTTVMLGFP-----KSNEYKGAGVFSHAIKISHQI---RDQVPGGGAVVQYDEFEGVGQSDDLPNPLPESVILRPWYAKGREIMVYDDSWHIHSAPDHIHRASIWRFM 347
P I P RR + GE S IRF+ L+++F +++F ++ FR A+R AMR+DLF SE N +K L SSL V W + P ++ L+++FKEY I L G FI+ + L G GSLIDI A NR K HSWHQD L + TVMLGFP +NE K GVFSHA+++SH++ D+V G+V++++ F G+ D + + ES I+RP Y +EIMVY D+ IHSAPD I+R ++WRFM
Sbjct: 117 PNILRTPRERRRENEAEIPSGE-SEIRFVSLSELFPE---TGFSQIFHREACFRTAVRAAMREDLFKESALLSENQNKAIKSLNSSLMVPWGQIPKDSELNALTKLFKEYKISDLTGKKFIEEITKLCGSNPH--------------GSLIDISNPALNRKKMKHSWHQDSGLDDRFTVMLGFPSENLRNANELK-EGVFSHAVRLSHRVFWPNDEV---GSVIEWESFP-CGEPRD--HEIAESYIIRPLYGINQEIMVYCDAKVIHSAPDFINREAVWRFM 374
BLAST of NO13G02690 vs. NCBI_GenBank
Match: XP_002287847.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95290.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 118.6 bits (296), Expect = 3.800e-23 Identity = 89/287 (31.01%), Postives = 135/287 (47.04%), Query Frame = 0
Query: 76 EDPPIWPVPASLRRAESLGGGEPSYIRFLGLAKVFEARDGAKLAELFDTDSLFRHAIRVAMRDDLFVPDPT---RSEKVNHFLKDLGSSLHVSWEKSPTQYANLSRVFKEYGIQGLDGVTFIK-SLGALAGGGQQCEDADGFLLREQRFGSLIDIVTAGNRLKPAHSWHQDCNL----PQTTVMLGFPKSNEYKGAGVFSHAIKISHQIRDQVPGGGAVVQYDEFEGVGQSDDLPN--------PLPESVILRPWYAKGREIMVYDDSWHIHSAPDHIHRASIWRFM 347
ED P++ P + E S++ + L +F G ++ F +D FR AIR AMR+D+F P SEK + L SSL SW+ A+ S ++ +K +LG A G + + G L + IDIV +R P HSWHQD TV+LGFPK ++Y+G GVFSH++ + ++E + ++ PN + E I+RP +AKGRE++++ D +HS+PD +RAS+ RFM
Sbjct: 113 EDAPLYVFPEDENNTQLTAIPEGSHVVSMSLDDLF---PGLDFSDKFFSDGEFRTAIRGAMREDVFDSTPQYSGMSEKARNMLLLPDSSLQGSWKCKHLTEASGSEDGASPALRMRKLTDVLKANLGDDAPTGDEFMEKIGSLCGSKPSTHWIDIVGVLDRRIP-HSWHQDTGRSYGGDSKTVLLGFPKEDKYEGVGVFSHSVNL------------------KYERIASNEHPPNEPVIYPGLTIDEEYIVRPKFAKGRELILFRDIDTLHSSPDVAYRASVMRFM 377
BLAST of NO13G02690 vs. NCBI_GenBank
Match: EJK71796.1 (hypothetical protein THAOC_06730, partial [Thalassiosira oceanica]) HSP 1 Score: 116.3 bits (290), Expect = 1.900e-22 Identity = 86/267 (32.21%), Postives = 131/267 (49.06%), Query Frame = 0
Query: 97 EPSYIRFLGLAKVFEARDGAKLAELFDTDSLFRHAIRVAMRDDLFVPDPT---RSEKVNHFLKDLGSSLHVSW-------EKSPTQYANLSRVFKEYGIQGL--DGVTFIKSLGALAGGGQQCEDADGFLLREQRFGSLIDIVTAGNRLKPAHSWHQDC----NLPQTTVMLGFPKSNEYKGAGVFSHAIKISHQ-IRDQVPGGGAVVQYDEFEGVGQSDDLPNPLPESVILRPWYAKGREIMVYDDSWHIHSAPDHIHRASIWRFM 347
E S+I+ L ++F + + + F + + FR A+R AMR+D+F P+ SEK L SS+ SW E + L+ V KEY + + G F++++GAL G IDIV +R P HSWHQD N TV+LGFPK + Y GAGVFSHA+K+ ++ + + V Y + E + ++ +++P +A+G EI+V+ D +HSAPD R+S+ RFM
Sbjct: 15 EGSHIQSYSLDELFP--EAGEFSRKFCSSNSFRSAMRHAMREDIFDSTPSYSGLSEKARRMLLLPDSSIQGSWNCKQFTSEDGQCRMKKLTEVLKEYLGEDVAPSGDEFMETVGALCGSKPSTH--------------WIDIVGVLDRRVP-HSWHQDTGRSPNGDTKTVLLGFPKEDNYDGAGVFSHAVKLKYERVAPEDHPTNEPVVYPKLE-----------VDDAYVVKPRFAEGSEIVVFRDIDIVHSAPDVAFRSSVMRFM 253 The following BLAST results are available for this feature:
BLAST of NO13G02690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 12
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02690 ID=NO13G02690|Name=NO13G02690|organism=Nannochloropsis oceanica|type=gene|length=1497bpback to top protein sequence of NO13G02690.1 >NO13G02690.1-protein ID=NO13G02690.1-protein|Name=NO13G02690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=347bpback to top Synonyms
Publications
|