NO13G02610, NO13G02610 (gene) Nannochloropsis oceanica

Overview
NameNO13G02610
Unique NameNO13G02610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1317
Alignment locationchr13:722314..723630 +

Link to JBrowse

Properties
Property NameValue
DescriptionActin-related protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:722314..723630 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
Homology
BLAST of NO13G02610 vs. NCBI_GenBank
Match: XP_015938852.1 (actin-related protein 4 [Arachis duranensis])

HSP 1 Score: 273.9 bits (699), Expect = 8.900e-70
Identity = 164/447 (36.69%), Postives = 249/447 (55.70%), Query Frame = 0
Query:    1 MYCGDEVFSVVGDLGTATSRFGYAGEDLPKAVFPSAVGHV----VDAVEGGRKKEKAGDAGASNSMDVDEAAAAGRIGSNAAAVLGDAKIGLRRTDLELSFPMENGHVRNWDAVERIWAHAFGQIAVRDEAKGVPFMYALPTWATRAESQTVMELAFERFEVGALYLARSAMLSAFSTGRASGIVCDCGAGSTSAVPLLDGYVLKQLVGRSERGGDWLDGKVGEWLASKKVTVRPF----------GQHQGVVAE--KMPPHYRQFQEQRVLRDVKESCCLVPQADSDDGAMFDVEDNDPEDGVYELPDGTKVKIDKALRRVPESVMLPGNDSAFSSSSTSSSI-PGPQDLPGLVYAAVEKADVDVRKELLGNVILTGAGSCFRGAAERLQFELTEKVPVAYKVKVV-TATPLERRFSAWIGGSILASLGSFQQLWLSKLEYEEMGA 430
            MY GDEV ++V DLG+ T + GYAGED PKAVFPS VG +    +D  E G K          NS    +A    +        +G   +G RR  +E+  P+++G V +WD V+ IW HAF +  + D  K  P + A P+  T+ + +   EL FE+++  AL+LA++A+L++F++GRA+ +V DCG GST+  P+ DGYVL++ V  S  GG++L   + + L SK + ++P           G+ Q V  +       Y+ + ++ +  D+KE  C  P    DD A  ++         YELPDG  ++I     ++P+ +  P          + + + P  + LP +V  ++ K DVD+R+EL  +++L G  +  +   ERL+ +L E+ P A +VKV+ +    ERRFS WIGGSILASLGSFQQ+W SK EYEE GA
Sbjct:    1 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDEAENGEK----------NSESTADAKNNDKPKGKRKLYVGSQSLGYRRDHMEVLSPLKDGIVADWDIVDNIWDHAFRECLLID-PKEHPMLLAEPSSNTQQQRERAAELMFEKYKAPALFLAKNAVLTSFASGRATSLVVDCGGGSTTVAPVHDGYVLQKAVATSPIGGEFLTDCLMKSLESKGIVIKPRYSFRRKEIRPGEFQTVDIDFPNTTESYKLYSQRVIASDIKECVCRAPDTPYDDSAYSNIPMTP-----YELPDGQTIEIGADRFKIPDVLFNPSLVQTIPGMESFAEVAPSVRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGA 431          
BLAST of NO13G02610 vs. NCBI_GenBank
Match: XP_013445586.2 (actin-related protein 4 isoform X2 [Medicago truncatula])

HSP 1 Score: 272.3 bits (695), Expect = 2.600e-69
Identity = 165/447 (36.91%), Postives = 255/447 (57.05%), Query Frame = 0
Query:    1 MYCGDEVFSVVGDLGTATSRFGYAGEDLPKAVFPSAVGHV----VDAVEGGRKKEKAGDAGASNSMDVDEAAAAGRIGSNAAAVLGDAKIGLRRTDLELSFPMENGHVRNWDAVERIWAHAFGQIAVRDEAKGVPFMYALPTWATRAESQTVMELAFERFEVGALYLARSAMLSAFSTGRASGIVCDCGAGSTSAVPLLDGYVLKQLVGRSERGGDWLDGKVGEWLASKKVTVRPF----------GQHQGVVAE--KMPPHYRQFQEQRVLRDVKESCCLVPQADSDDGAMFDVEDNDPEDGVYELPDGTKVKIDKALRRVPESVMLPGNDSAFSSSSTSSSI-PGPQDLPGLVYAAVEKADVDVRKELLGNVILTGAGSCFRGAAERLQFELTEKVPVAYKVKVV-TATPLERRFSAWIGGSILASLGSFQQLWLSKLEYEEMGA 430
            MY GDEV ++V DLG+ T + GYAGED PKAVFPS VG +    VD  +   K   +G++  +N  +VD   A G+        +G   +G RR  +E+  P+++G V +WD V+ IW HAF +  + D  K  P + A P+   + + +   EL FE+++  AL+LA++A+L++F++GRA+ +V DCG GST+  P+ DGYVL++ V  S  GG++L   + + L SK + ++P           G+ Q V  +       Y+ + ++ +  D+KE  C  P    D+ A  ++         YELPDG  ++I     ++P+ +  P    +     + + I P  + LP +V  ++ K DVD+R+EL  +++L G  +  +   ERL+ +L E+ P A +VKV+ +    ERRFS WIGGSILASLGSFQQ+W SK EYEE GA
Sbjct:    1 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDVDESDNAEKNSGSGES-KNNIRNVDGDKAKGK----RKLYVGSQSLGYRRDFMEVVSPLKDGIVADWDIVDSIWDHAFRECLLID-PKEHPMLLAEPSSNAQQQRERAAELMFEKYKAPALFLAKNAVLTSFASGRATSLVVDCGGGSTTVAPVHDGYVLQKAVATSPIGGEFLTDCLMKSLESKGIAMKPRYSFRRKEIRPGEFQTVDLDFPNTSESYKLYSQRVIASDIKECVCRAPDTPYDESAYSNIPTTS-----YELPDGQTIEIGADRFKIPDVLFNPSLAHSIPGMESFAEIAPSVRGLPQMVIQSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGA 436          
BLAST of NO13G02610 vs. NCBI_GenBank
Match: XP_009344621.1 (PREDICTED: actin-related protein 4-like [Pyrus x bretschneideri])

HSP 1 Score: 271.9 bits (694), Expect = 3.400e-69
Identity = 172/447 (38.48%), Postives = 253/447 (56.60%), Query Frame = 0
Query:    1 MYCGDEVFSVVGDLGTATSRFGYAGEDLPKAVFPSAVGHV----VDAVEGGRKKEKAGDAGASNSMDVDEAAAAGRIGSNAAAVLGDAKIGLRRTDLELSFPMENGHVRNWDAVERIWAHAFGQIAVRDEAKGVPFMYALPTWATRAESQTVMELAFERFEVGALYLARSAMLSAFSTGRASGIVCDCGAGSTSAVPLLDGYVLKQLVGRSERGGDWLDGKVGEWLASKKVTVRPF----------GQHQGVVAE--KMPPHYRQFQEQRVLRDVKESCCLVPQADSDDGAMFDVEDNDPEDGVYELPDGTKVKIDKALRRVPESVMLPGNDSAFSSSSTSSSI-PGPQDLPGLVYAAVEKADVDVRKELLGNVILTGAGSCFRGAAERLQFELTEKVPVAYKVKVVTA-TPLERRFSAWIGGSILASLGSFQQLWLSKLEYEEMGA 430
            MY GDEV ++V DLG+ T + GYAGED PKAVFPS VG +    VDA E       A D   +NS  +D   A G+        +G   +G RR  +E+  P+++G V +WDAVE IW HAF +  + D  K  P + A P+  T+ + +   EL FE+++V AL+LA++A+L++F++GRA+ +V D G GST+  P+ DGYVL++ V  S  GG++L     + L SK +T++P           G+ Q V  +       YR + ++ +  D+KE  C  P    D+ A  ++         YELPDG  ++I     ++P+ +  P            + I P  + LP +V  ++ K DVD+R+EL  +++L G  +  +   ERL+ ++ E+ P A +VKV+ A    ERRFS WIGGSILASLGSFQQ+W SK EYEE GA
Sbjct:    1 MYGGDEVSAIVLDLGSHTCKAGYAGEDAPKAVFPSVVGSIDQMEVDATEMENNSGSAVDP-KNNSKSLDSDKAKGK----RKLYVGSQSLGYRRDHMEVLSPIKDGVVVDWDAVEGIWDHAFRECLLVD-PKEHPMLLAEPSLNTQQQRERTTELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDGGGGSTTVAPVHDGYVLQKAVLSSPIGGEFLTDCFTKSLESKGMTIKPRYSFKRRETRPGEFQVVDVDFPNTTESYRLYSQRIIASDIKECVCRAPDTPYDEIAYSNIPMTS-----YELPDGQTIEIGADRFKIPDILFNPSLAQTIPGMEHFAEIAPTVRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDMLEESPQAARVKVLVAGNSTERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGA 436          
BLAST of NO13G02610 vs. NCBI_GenBank
Match: XP_008226362.1 (PREDICTED: actin-related protein 4 [Prunus mume])

HSP 1 Score: 271.6 bits (693), Expect = 4.400e-69
Identity = 168/445 (37.75%), Postives = 252/445 (56.63%), Query Frame = 0
Query:    1 MYCGDEVFSVVGDLGTATSRFGYAGEDLPKAVFPSAVGHVVDAVEGGRKKEKAGDA--GASNSMDVDEAAAAGRIGSNAAAVLGDAKIGLRRTDLELSFPMENGHVRNWDAVERIWAHAFGQIAVRDEAKGVPFMYALPTWATRAESQTVMELAFERFEVGALYLARSAMLSAFSTGRASGIVCDCGAGSTSAVPLLDGYVLKQLVGRSERGGDWLDGKVGEWLASKKVTVRPF----------GQHQGVVAEKMP---PHYRQFQEQRVLRDVKESCCLVPQADSDDGAMFDVEDNDPEDGVYELPDGTKVKIDKALRRVPESVMLPGNDSAFSSSSTSSSIPGPQDLPGLVYAAVEKADVDVRKELLGNVILTGAGSCFRGAAERLQFELTEKVPVAYKVKVV-TATPLERRFSAWIGGSILASLGSFQQLWLSKLEYEEMGA 430
            MY GDEV ++V DLG+ T + GYAGED PKAVFPS VG +            +G A    SNS  +D   A G+        +G   +G RR  +E+  P+++G + +W+AVE IW HAF +  + D  K  P + A P+  T+ + +   EL FE+++V AL+LA++A+L++F++GRA+ +V D G GST+  P+ DGYVL++ V  S  GG++L   + + L SK +T++P           G+ Q VV   +P     Y+ + ++ V  D+KE  C  P    D+ A  ++         YELPDG  ++I     ++P+ +  P            + I   + LP +V  ++ K DVD+R+EL  +++L G  +  +   ERL+ +L E+ P A +VKV+ +    ERRFS WIGGSILASLGSFQQ+W SK EYEE GA
Sbjct:    1 MYGGDEVSAIVLDLGSHTCKAGYAGEDAPKAVFPSVVGSIDQMEVEXXXXXXSGPAVDPKSNSKSLDSDKAKGK----RKLYVGSQALGYRRDHMEVLSPIKDGVIVDWEAVEGIWDHAFRECLLVD-PKEHPMLLAEPSSNTQQQRERTAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGGGSTTVAPVHDGYVLQKAVASSPIGGEFLTDCLTKSLESKGMTIKPRYSFKRKETRPGEFQ-VVDVDLPNTTESYKLYSQRVVASDIKECVCRAPDTPYDESAYSNIPTTS-----YELPDGQTIEIGADRFKIPDILFNPSLAQTIPGVENFAEIAPLRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNSTERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGA 434          
BLAST of NO13G02610 vs. NCBI_GenBank
Match: XP_019463694.1 (PREDICTED: actin-related protein 4-like isoform X1 [Lupinus angustifolius] >OIW00977.1 hypothetical protein TanjilG_16226 [Lupinus angustifolius])

HSP 1 Score: 271.6 bits (693), Expect = 4.400e-69
Identity = 166/450 (36.89%), Postives = 251/450 (55.78%), Query Frame = 0
Query:    1 MYCGDEVFSVVGDLGTATSRFGYAGEDLPKAVFPSAVGHVVDAVEGGRKKEKAGDAGASNSMDVDEAAAAGRIGSNA-------AAVLGDAKIGLRRTDLELSFPMENGHVRNWDAVERIWAHAFGQIAVRDEAKGVPFMYALPTWATRAESQTVMELAFERFEVGALYLARSAMLSAFSTGRASGIVCDCGAGSTSAVPLLDGYVLKQLVGRSERGGDWLDGKVGEWLASKKVTVRPF----------GQHQGVVAE--KMPPHYRQFQEQRVLRDVKESCCLVPQADSDDGAMFDVEDNDPEDGVYELPDGTKVKIDKALRRVPESVMLPGNDSAFSSSSTSSSI-PGPQDLPGLVYAAVEKADVDVRKELLGNVILTGAGSCFRGAAERLQFELTEKVPVAYKVKVV-TATPLERRFSAWIGGSILASLGSFQQLWLSKLEYEEMGA 430
            MY GDEV ++V DLG+ T + GYAGED PKAVFPS                    AGA + MD+DE+  A +   +A          +G   +G RR  +E+  P ++G V +WD V+ IW HAF +  + D  K  P + A P+  T+ + +   EL FE+++  AL+LA++A+L++F++GRA+ +V DCG GST+ VP+ DGYVL++ V  +  GG++L   + + L SK + ++P           G+ Q V  +       Y+ + ++ +  D+KES C  P    D+ A  ++         YELPDG  ++I     ++P+ +  P          + + I P  + LP +V  ++ K DVD+R+EL  +++L G  +  +   ERL+ EL E+ P A +VKV+ +    ERRFS WIGGSILASLGSFQQ+W SK EYEE GA
Sbjct:    1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSV-------------------AGAVDHMDIDESDNAEKSSVSAEKDKGKRKLYVGSQSLGYRRDHMEVLSPFKDGIVADWDIVDSIWDHAFRECLLID-PKEHPMLLAEPSSNTQQQRERAAELMFEKYKAPALFLAKNAVLTSFASGRATSLVVDCGGGSTTVVPVHDGYVLQKAVATTPIGGEFLTDCLMKSLESKGIVIKPRYSFRRKEIRPGELQTVDLDFPNTTESYKLYAQRLIASDIKESVCRAPDTPYDESAYSNIPTT-----AYELPDGQTIEIGADRFKIPDVLFTPSLVQTIPGMESFAEIAPTVRGLPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKELLEESPHAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKTEYEEHGA 425          
BLAST of NO13G02610 vs. NCBI_GenBank
Match: XP_024640354.1 (actin-related protein 4 isoform X2 [Medicago truncatula])

HSP 1 Score: 271.6 bits (693), Expect = 4.400e-69
Identity = 165/447 (36.91%), Postives = 255/447 (57.05%), Query Frame = 0
Query:    1 MYCGDEVFSVVGDLGTATSRFGYAGEDLPKAVFPSAVGHV----VDAVEGGRKKEKAGDAGASNSMDVDEAAAAGRIGSNAAAVLGDAKIGLRRTDLELSFPMENGHVRNWDAVERIWAHAFGQIAVRDEAKGVPFMYALPTWATRAESQTVMELAFERFEVGALYLARSAMLSAFSTGRASGIVCDCGAGSTSAVPLLDGYVLKQLVGRSERGGDWLDGKVGEWLASKKVTVRPF----------GQHQGVVAE--KMPPHYRQFQEQRVLRDVKESCCLVPQADSDDGAMFDVEDNDPEDGVYELPDGTKVKIDKALRRVPESVMLPGNDSAFSSSSTSSSI-PGPQDLPGLVYAAVEKADVDVRKELLGNVILTGAGSCFRGAAERLQFELTEKVPVAYKVKVV-TATPLERRFSAWIGGSILASLGSFQQLWLSKLEYEEMGA 430
            MY GDEV ++V DLG+ T + GYAGED PKAVFPS VG +    VD  +   K   +G++  +N  +VD   A G+        +G   +G RR  +E+  P+++G V +WD V+ IW HAF +  + D  K  P + A P+   + + +   EL FE+++  AL+LA++A+L++F++GRA+ +V DCG GST+  P+ DGYVL++ V  S  GG++L   + + L SK + ++P           G+ Q V  +       Y+ + ++ +  D+KE  C  P    D+ A  ++         YELPDG  ++I     ++P+ +  P    +     + + I P  + LP +V  ++ K DVD+R+EL  +++L G  +  +   ERL+ +L E+ P A +VKV+ +    ERRFS WIGGSILASLGSFQQ+W SK EYEE GA
Sbjct:    1 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDVDESDDAEKNSGSGES-KNNIRNVDGDKAKGK----RKLYVGSQSLGYRRDFMEVVSPLKDGIVADWDIVDSIWDHAFRECLLID-PKEHPMLLAEPSSNAQQQRERAAELMFEKYKAPALFLAKNAVLTSFASGRATSLVVDCGGGSTTVAPVHDGYVLQKAVATSPIGGEFLTDCLMKSLESKGIAMKPRYSFRRKEIRPGEFQTVDLDFPNTSESYKLYSQRVIASDIKECVCRAPDTPYDESAYSNIPTTS-----YELPDGQTIEIGADRFKIPDVLFNPSLAHSIPGMESFAEIAPSVRGLPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGA 436          
BLAST of NO13G02610 vs. NCBI_GenBank
Match: XP_020417084.1 (actin-related protein 4 [Prunus persica] >XP_021832764.1 actin-related protein 4 [Prunus avium] >ONI12256.1 hypothetical protein PRUPE_4G154200 [Prunus persica])

HSP 1 Score: 271.2 bits (692), Expect = 5.800e-69
Identity = 166/444 (37.39%), Postives = 250/444 (56.31%), Query Frame = 0
Query:    1 MYCGDEVFSVVGDLGTATSRFGYAGEDLPKAVFPSAVGHVVDAVEGGRKKEKAGDA--GASNSMDVDEAAAAGRIGSNAAAVLGDAKIGLRRTDLELSFPMENGHVRNWDAVERIWAHAFGQIAVRDEAKGVPFMYALPTWATRAESQTVMELAFERFEVGALYLARSAMLSAFSTGRASGIVCDCGAGSTSAVPLLDGYVLKQLVGRSERGGDWLDGKVGEWLASKKVTVRPF----------GQHQGVVAE--KMPPHYRQFQEQRVLRDVKESCCLVPQADSDDGAMFDVEDNDPEDGVYELPDGTKVKIDKALRRVPESVMLPGNDSAFSSSSTSSSIPGPQDLPGLVYAAVEKADVDVRKELLGNVILTGAGSCFRGAAERLQFELTEKVPVAYKVKVV-TATPLERRFSAWIGGSILASLGSFQQLWLSKLEYEEMGA 430
            MY GDEV ++V DLG+ T + GYAGED PKAVFPS VG +            +G A    SNS  +D   A G+        +G   +G RR  +E+  P+++G + +W+AVE IW HAF +  + D  K  P + A P+  T+ + +   EL FE+++V AL+LA++A+L++F++GRA+ +V D G GST+  P+ DGYVL++ V  S  GG++L   + + L SK +T++P           G+ Q V  +       Y+ + ++ V  D+KE  C  P    D+ A  ++         YELPDG  ++I     ++P+ +  P            + I   + LP +V  ++ K DVD+R+EL  +++L G  +  +   ERL+ +L E+ P A +VKV+ +    ERRFS WIGGSILASLGSFQQ+W SK EYEE GA
Sbjct:    1 MYGGDEVSAIVLDLGSHTCKAGYAGEDAPKAVFPSVVGSIDQMEVEXXXXXXSGPAVDPKSNSKSLDSDKAKGK----RKLYVGSQALGYRRDHMEVLSPIKDGVIVDWEAVEGIWDHAFRECLLVD-PKEHPMLLAEPSSNTQQQRERTAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGGGSTTVAPVHDGYVLQKAVASSPIGGEFLTDCLTKSLESKGMTIKPRYSFKRKETRPGEFQVVDVDFPNTTESYKLYSQRVVASDIKECVCRAPDTPYDESAYSNIPTTS-----YELPDGQTIEIGADRFKIPDILFNPSLAQTIPGVENFAEIAPLRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNSTERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGA 434          
BLAST of NO13G02610 vs. NCBI_GenBank
Match: XP_019446282.1 (PREDICTED: actin-related protein 4-like [Lupinus angustifolius] >XP_019446283.1 PREDICTED: actin-related protein 4-like [Lupinus angustifolius])

HSP 1 Score: 270.4 bits (690), Expect = 9.800e-69
Identity = 165/448 (36.83%), Postives = 253/448 (56.47%), Query Frame = 0
Query:    1 MYCGDEVFSVVGDLGTATSRFGYAGEDLPKAVFPSAVGHVVDAVEGGRKKEKAGDAGA-----SNSMDVDEAAAAGRIGSNAAAVLGDAKIGLRRTDLELSFPMENGHVRNWDAVERIWAHAFGQIAVRDEAKGVPFMYALPTWATRAESQTVMELAFERFEVGALYLARSAMLSAFSTGRASGIVCDCGAGSTSAVPLLDGYVLKQLVGRSERGGDWLDGKVGEWLASKKVTVRPF----------GQHQGVVAE--KMPPHYRQFQEQRVLRDVKESCCLVPQADSDDGAMFDVEDNDPEDGVYELPDGTKVKIDKALRRVPESVMLPGNDSAFSSSSTSSSI-PGPQDLPGLVYAAVEKADVDVRKELLGNVILTGAGSCFRGAAERLQFELTEKVPVAYKVKVV-TATPLERRFSAWIGGSILASLGSFQQLWLSKLEYEEMGA 430
            MY GDEV ++V DLG+ T + GYAGED PKAVFPS VG  +D ++     + A + GA     +N+  +D     G+        +G   +G RR  +E+  P++NG V +W+ V+ IW HA  +  + D  K  P + A P   T+ + +   EL FE+++V AL+LAR+A+L++F++GRA+ +V DCG GST+  P+LDGYVL + V  S  GGD+L   + + L  K + +RP           G  Q +  +  +    Y+ + ++ +  D+KE  C  P +  D+ A  ++         YELPDG  ++I     ++P+ +  P          + + I P  + LP +V  ++ K DVD+R+EL  +++L G  +  +   ER++ +L E+ P A +VKV+ +    ERRFS WIGGSILASLGSFQQ+W SK EYEE GA
Sbjct:    1 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVG-AIDQMDIHGHGDAAENMGAAVEIQNNAKSLDSEKTKGK----CKLYVGSQSLGYRRDHMEVLSPLKNGVVVDWNIVDNIWDHALRECLLVD-PKERPMLLAEPCSNTQEQRERTAELMFEKYQVPALFLARNAVLTSFASGRATSLVIDCGGGSTTVAPVLDGYVLHKGVTTSPIGGDFLTECLMKSLEGKGIRIRPRYSFKKREIRPGNLQAINLDFPQTTESYKVYSQRVIASDIKECVCRAPDSPYDESAYANIPTTS-----YELPDGQIIEIGSDKFKIPDILFNPSLVQTIPGMESFAGIAPSIRGLPKMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERIEKDLLEESPQAARVKVIGSGNATERRFSVWIGGSILASLGSFQQMWFSKAEYEEQGA 437          
BLAST of NO13G02610 vs. NCBI_GenBank
Match: OWM91231.1 (hypothetical protein CDL15_Pgr000175 [Punica granatum])

HSP 1 Score: 270.0 bits (689), Expect = 1.300e-68
Identity = 160/443 (36.12%), Postives = 249/443 (56.21%), Query Frame = 0
Query:    3 CGDEVFSVVGDLGTATSRFGYAGEDLPKAVFPSAVGHV--VDAVEGGRKKEKAGDAGASNSMDVDEAAAAGRIGSNAAAVLGDAKIGLRRTDLELSFPMENGHVRNWDAVERIWAHAFGQIAVRDEAKGVPFMYALPTWATRAESQTVMELAFERFEVGALYLARSAMLSAFSTGRASGIVCDCGAGSTSAVPLLDGYVLKQLVGRSERGGDWLDGKVGEWLASKKVTVRPF----------GQHQGVVAE--KMPPHYRQFQEQRVLRDVKESCCLVPQADSDDGAMFDVEDNDPEDGVYELPDGTKVKIDKALRRVPESVMLPGNDSAFSSSSTSSSI-PGPQDLPGLVYAAVEKADVDVRKELLGNVILTGAGSCFRGAAERLQFELTEKVPVAYKVKVV-TATPLERRFSAWIGGSILASLGSFQQLWLSKLEYEEMGA 430
            C DEV ++V DLG+ T + GYAGED PKAVFPS VG +  ++  E       +G AG +  M   E+   G+        +G   +G RR  +E+  P ++G V +WD V+ IW HAF +  + D  K  P + A P+  T+ + +  +EL FE++++ AL+LA++A+L++F++GRA+ +V DCG GST+  P+ DGYVL++ V  S  GG++L   + + L SK + ++P           G  Q V  +       Y+ + ++ +  D+KES C  P    D+ A  ++         YELPDG  ++I     ++P+ +  P            S + P  + L  ++  ++ K DVD+R+EL  +++L G  +  +   ERL+ +L E+ P A +VKV+ +    ERR+S WIGGSILASLGSFQQ+W SK EYEE GA
Sbjct:   45 CADEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGSIDQMEVDEPATTDANSGSAGDAKGMKTPESEKKGK----RKLYVGSQSLGFRRDHMEVISPFKDGIVADWDIVDSIWDHAFRECLLID-PKEHPMLLAEPSSNTQQQRERAVELMFEKYKIPALFLAKNAVLTSFASGRATSLVVDCGGGSTTVAPVHDGYVLQKAVASSPIGGEFLTDCLMKSLESKGIKIKPRYSFKRKEIRPGVFQTVDLDLPNTTESYKLYSQRLIASDIKESVCRAPDTPYDETAYANIPMTS-----YELPDGQTIEIGADRFKIPDILFNPSLAQIIPGMENFSEVGPSARGLSQMIIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNTTERRYSVWIGGSILASLGSFQQMWFSKSEYEEHGA 477          
BLAST of NO13G02610 vs. NCBI_GenBank
Match: XP_020221948.1 (actin-related protein 4-like [Cajanus cajan])

HSP 1 Score: 268.5 bits (685), Expect = 3.700e-68
Identity = 167/449 (37.19%), Postives = 255/449 (56.79%), Query Frame = 0
Query:    1 MYCGDEVFSVVGDLGTATSRFGYAGEDLPKAVFPSAVGHV--VDAVEGGRKKEKAGDAG--ASNSMDVDEAAAAGRIGSNAAAVLGDAKIGLRRTDLELSFPMENGHVRNWDAVERIWAHAFGQIAVRDEAKGVPFMYALPTWATRAESQTVMELAFERFEVGALYLARSAMLSAFSTGRASGIVCDCGAGSTSAVPLLDGYVLKQLVGRSERGGDWLDGKVGEWLASKKVTVRP----------FGQHQGVVAEKMPPH----YRQFQEQRVLRDVKESCCLVPQADSDDGAMFDVEDNDPEDGVYELPDGTKVKIDKALRRVPESVMLPGNDSAFSSSSTSSSI-PGPQDLPGLVYAAVEKADVDVRKELLGNVILTGAGSCFRGAAERLQFELTEKVPVAYKVKV-VTATPLERRFSAWIGGSILASLGSFQQLWLSKLEYEEMGA 430
            MY GDEV ++V DLG+ T + GYAGED PKAVFPS VG +  +D    G   E +G +G   +N+ + D     G+        +G   +G RR  +E+  P++NG V +W+ V+ IW HA  +  + D  K  P + A P   T+ + +   EL FE+++V AL+LA++A+L++F++GRA+ +V D G GST+ VP+LDGYVL++ V  S  GG++L   + + L  K +T+RP           G  Q V  +   PH    Y+ + ++ +  D+KE  C  P +  D+ A  ++         YELPDG  +++     ++P+ +  P          + + I P  + LP ++  ++ K DVD+R+EL   ++LTG  +  +   ER++ +L E+ P A +VKV  +    ERRFS WIGGSILASLGSFQQ+W SK EYEE GA
Sbjct:    1 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDGTGDADENSGASGDLQNNAKNNDSDKTKGK----CKLYVGSQSLGYRRDYMEVLSPLKNGVVVDWNIVDNIWDHALRECLLVD-PKERPMLLAEPCSNTQEQRERAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGGGSTTVVPVLDGYVLQKAVITSPIGGEFLTDCLMKSLEGKGITIRPRYSFKKKEIRLGSLQTVDLDF--PHTTESYKLYSQRVIASDIKECVCRTPDSPYDESAYSNIPMTP-----YELPDGQIIEVGSDRFKIPDILFNPSLVQTIPGMESFAEIAPSIRGLPKMIIESINKCDVDIRRELFSTILLTGGTASMQQLKERIEKDLLEESPQAARVKVFASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEQGA 437          
The following BLAST results are available for this feature:
BLAST of NO13G02610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_015938852.18.900e-7036.69actin-related protein 4 [Arachis duranensis][more]
XP_013445586.22.600e-6936.91actin-related protein 4 isoform X2 [Medicago trunc... [more]
XP_009344621.13.400e-6938.48PREDICTED: actin-related protein 4-like [Pyrus x b... [more]
XP_008226362.14.400e-6937.75PREDICTED: actin-related protein 4 [Prunus mume][more]
XP_019463694.14.400e-6936.89PREDICTED: actin-related protein 4-like isoform X1... [more]
XP_024640354.14.400e-6936.91actin-related protein 4 isoform X2 [Medicago trunc... [more]
XP_020417084.15.800e-6937.39actin-related protein 4 [Prunus persica] >XP_02183... [more]
XP_019446282.19.800e-6936.83PREDICTED: actin-related protein 4-like [Lupinus a... [more]
OWM91231.11.300e-6836.12hypothetical protein CDL15_Pgr000175 [Punica grana... [more]
XP_020221948.13.700e-6837.19actin-related protein 4-like [Cajanus cajan][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR024ncniR024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001634NSK001634Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02610.1NO13G02610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596203gene_6749Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|618440gene_11397Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100070g8gene8514Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02610.1NO13G02610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02610 ID=NO13G02610|Name=NO13G02610|organism=Nannochloropsis oceanica|type=gene|length=1317bp
ATGTATTGTGGGGACGAGGTCTTCTCCGTGGTGGGCGATTTAGGCACGGC
CACCAGCCGCTTTGGATATGCCGGGGAGGACTTGCCCAAAGCTGTCTTTC
CCTCGGCCGTAGGACATGTGGTGGATGCGGTGGAGGGTGGCAGGAAGAAG
GAAAAGGCAGGCGACGCAGGGGCATCGAACAGTATGGACGTAGATGAGGC
CGCCGCTGCCGGAAGGATCGGTAGCAATGCTGCAGCTGTACTTGGAGACG
CGAAAATTGGACTTCGACGAACGGATTTAGAACTATCTTTTCCCATGGAG
AACGGGCACGTGCGGAATTGGGATGCAGTGGAGAGGATTTGGGCCCACGC
GTTTGGACAAATAGCCGTACGGGACGAAGCCAAGGGTGTTCCTTTCATGT
ACGCCTTGCCCACGTGGGCCACGCGCGCCGAGAGTCAAACAGTGATGGAG
CTGGCTTTTGAAAGGTTTGAAGTGGGTGCTTTGTATTTGGCGCGGTCGGC
CATGTTGAGTGCGTTCTCCACCGGTCGGGCGAGTGGGATTGTGTGTGATT
GCGGCGCTGGCTCGACGAGTGCTGTGCCGTTATTGGATGGATATGTGCTA
AAGCAGCTGGTGGGGAGAAGTGAGAGGGGCGGGGACTGGTTGGATGGAAA
GGTTGGGGAGTGGTTGGCCTCGAAAAAAGTAACGGTGAGACCGTTTGGGC
AGCATCAGGGGGTGGTGGCAGAAAAGATGCCTCCGCATTACCGGCAGTTC
CAGGAACAACGCGTGCTGCGCGATGTGAAGGAGAGTTGTTGTTTGGTCCC
GCAGGCAGATAGTGACGATGGGGCTATGTTTGATGTGGAGGATAACGACC
CGGAGGACGGAGTATACGAGCTCCCCGACGGCACCAAGGTCAAAATTGAC
AAGGCCCTCCGGCGGGTGCCGGAATCTGTCATGCTCCCAGGGAATGACAG
TGCTTTTTCCTCCTCTTCCACGTCGTCATCAATACCAGGACCGCAGGATC
TACCGGGGTTGGTGTACGCAGCGGTGGAGAAGGCGGATGTGGACGTGCGG
AAAGAGTTGTTGGGAAACGTGATTTTGACGGGAGCGGGTAGCTGTTTCCG
TGGAGCAGCAGAACGATTGCAATTTGAACTGACAGAGAAAGTGCCAGTGG
CGTACAAGGTGAAGGTCGTGACGGCCACGCCGTTGGAGAGGCGGTTTAGT
GCGTGGATTGGAGGGTCCATTTTAGCGTCCTTAGGCTCGTTTCAGCAGCT
GTGGCTATCCAAGCTAGAGTATGAGGAAATGGGAGCCGAAAGGGCTCTCA
AGGAGAGGTTTCACTGA
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protein sequence of NO13G02610.1

>NO13G02610.1-protein ID=NO13G02610.1-protein|Name=NO13G02610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=439bp
MYCGDEVFSVVGDLGTATSRFGYAGEDLPKAVFPSAVGHVVDAVEGGRKK
EKAGDAGASNSMDVDEAAAAGRIGSNAAAVLGDAKIGLRRTDLELSFPME
NGHVRNWDAVERIWAHAFGQIAVRDEAKGVPFMYALPTWATRAESQTVME
LAFERFEVGALYLARSAMLSAFSTGRASGIVCDCGAGSTSAVPLLDGYVL
KQLVGRSERGGDWLDGKVGEWLASKKVTVRPFGQHQGVVAEKMPPHYRQF
QEQRVLRDVKESCCLVPQADSDDGAMFDVEDNDPEDGVYELPDGTKVKID
KALRRVPESVMLPGNDSAFSSSSTSSSIPGPQDLPGLVYAAVEKADVDVR
KELLGNVILTGAGSCFRGAAERLQFELTEKVPVAYKVKVVTATPLERRFS
AWIGGSILASLGSFQQLWLSKLEYEEMGAERALKERFH*
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Synonyms
Publications