NO13G02570, NO13G02570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G02570 vs. NCBI_GenBank
Match: XP_005856328.1 (zinc finger family protein [Nannochloropsis gaditana CCMP526] >EKU20031.1 zinc finger family protein [Nannochloropsis gaditana CCMP526] >EWM21910.1 Zinc finger, RING-type [Nannochloropsis gaditana]) HSP 1 Score: 182.2 bits (461), Expect = 2.400e-42 Identity = 102/208 (49.04%), Postives = 125/208 (60.10%), Query Frame = 0 Query: 93 WACVVTTGILLAGLTFLWLRLRL-----HRNSSTQNRS-TSTCSPALVSDCFTWYRQSHTSSSSSPSYRLRRSDGNMRHLFGHHLAVQEAAALSGGMMNLARLQLMLTTRDFTGDDYEMLSRLDEXXXXXXXXXXXHMGCSQEELDRLPVYTVESEWNGHSDNSKCLICLSDFAKGDVVRILPCLHQFHQAECVDPWLRRKMLCPVCK 295 W +V L WLR RL R S + CS AL +CF+WYRQS TSS S S+ R G +R L GH +AV+E ALS + +RLQLML RDF+ +DYE+LSRLDE +G + EL+RLP Y V++E + +KC ICL+DF KG+VVRILPCLHQFHQ+EC DPWLRRKM CPVCK Sbjct: 2 WILIVIISALSGAAFLYWLRSRLQCGIQRRGDDADMLSFQAACSHALSGECFSWYRQSRTSSQS--SFITGRRSGGVRRLIGHQIAVEEGIALSRRGTDSSRLQLMLMDRDFSSEDYEVLSRLDEDEQDACHL----LGATDAELERLPTYIVDTE----TKLNKCFICLNDFLKGEVVRILPCLHQFHQSECCDPWLRRKMECPVCK 199
BLAST of NO13G02570 vs. NCBI_GenBank
Match: OQR85603.1 (hypothetical protein ACHHYP_20563 [Achlya hypogyna]) HSP 1 Score: 102.8 bits (255), Expect = 1.800e-18 Identity = 54/118 (45.76%), Postives = 67/118 (56.78%), Query Frame = 0 Query: 183 MMNLARLQLMLTTRDFTGDDYEMLSRLDEXXXXXXXXXXXHMGCSQEELDRLPVYTV-ESEWNGHSD-----NSKCLICLSDFAKGDVVRILPCLHQFHQAECVDPWLRRKMLCPVCK 295 ++ A LQL+LT RDF +DYE L +LD+ G S E+DRLPV TV ES GH D N +C ICL D G R++PC H+FH EC+DPWL K CP+CK Sbjct: 76 LLTRAHLQLLLTDRDFDSNDYEQLLQLDDHNVQKSH------GASDGEIDRLPVVTVTESMLKGHKDTTGLENIQCSICLEDLTLGSQARMVPCFHRFH-PECIDPWLSEKAECPICK 186
BLAST of NO13G02570 vs. NCBI_GenBank
Match: XP_009538583.1 (hypothetical protein PHYSODRAFT_356170 [Phytophthora sojae] >EGZ05722.1 hypothetical protein PHYSODRAFT_356170 [Phytophthora sojae]) HSP 1 Score: 100.9 bits (250), Expect = 7.000e-18 Identity = 46/106 (43.40%), Postives = 64/106 (60.38%), Query Frame = 0 Query: 189 LQLMLTTRDFTGDDYEMLSRLDEXXXXXXXXXXXHMGCSQEELDRLPVYTVESEWNGHSDNSKCLICLSDFAKGDVVRILPCLHQFHQAECVDPWLRRKMLCPVCK 295 LQL+L+ RDF +DYE L RL+ H G + +++ +LPV V S+N+ C +CLS F G VR++PC H+FH EC+DPWL+ K LCP+CK Sbjct: 88 LQLLLSNRDFDSNDYERLMRLE------TLNERRHEGATPQQIQQLPVVAVTEGMLQASENASCTVCLSTFELGGCVRMMPCFHRFH-PECIDPWLQEKALCPICK 186
BLAST of NO13G02570 vs. NCBI_GenBank
Match: XP_002183877.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44546.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 99.0 bits (245), Expect = 2.700e-17 Identity = 47/119 (39.50%), Postives = 67/119 (56.30%), Query Frame = 0 Query: 183 MMNLARLQLMLTTRDFTGDDYEMLSRLDEXXXXXXXXXXXHMGCSQEELDRLPVYTVESEWN-------GHSDNSKCLICLSDFAKGDVVRILPCLHQFHQAECVDPWLRRKMLCPVCK 295 M+NL+ L+L++ R+ TGDDY L R +E H+G SQ+E+DRLP+ + + D C ICL + D VR +PC H FH++ C+DPWLR+K CP+CK Sbjct: 195 MINLSSLRLVMRGRELTGDDYAALLRFNEESGPALESLLNHVGLSQQEIDRLPLRRLSDPMDEVLRRPMSEEDLPLCTICLEPYRLEDEVRSIPCFHYFHKS-CIDPWLRQKASCPICK 312
BLAST of NO13G02570 vs. NCBI_GenBank
Match: XP_012209522.1 (hypothetical protein SPRG_15094 [Saprolegnia parasitica CBS 223.65] >KDO19760.1 hypothetical protein SPRG_15094 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 98.6 bits (244), Expect = 3.500e-17 Identity = 53/118 (44.92%), Postives = 70/118 (59.32%), Query Frame = 0 Query: 183 MMNLARLQLMLTTRDFTGDDYEMLSRLDEXXXXXXXXXXXHMGCSQEELDRLPVYTV-ESEWNGH-----SDNSKCLICLSDFAKGDVVRILPCLHQFHQAECVDPWLRRKMLCPVCK 295 +++ A LQL+LT RDF +DYE L +LDE G S+ ++DRLPV TV E+ GH SD +C ICL D A G + R++PC H+FH EC+D WL K CP+CK Sbjct: 80 LLSRAHLQLLLTDRDFDSNDYEQLLQLDEHNVAKSH------GASEGDIDRLPVVTVTETMLQGHKEATGSDAIQCSICLEDLAVGALARMVPCFHRFH-PECIDLWLFEKAECPICK 190
BLAST of NO13G02570 vs. NCBI_GenBank
Match: XP_022924728.1 (uncharacterized protein LOC111432144 isoform X1 [Cucurbita moschata]) HSP 1 Score: 97.4 bits (241), Expect = 7.700e-17 Identity = 66/183 (36.07%), Postives = 90/183 (49.18%), Query Frame = 0 Query: 114 RLHRNSSTQNRSTSTCSPALVSDCFTWYRQSHTSSSSSPSYRLRRSDGNMRHLFGHHLAVQEAAALSGGMMNLARL--QLMLTTRDFTGDDYEMLSRLDEXXXXXXXXXXXHMGCSQEELDRLPVYTVESEWNGHSDNSKCLICLSDFAKGDVVRILPCLHQFHQAECVDPWLRRKMLCPVCK 295 R R+ S+QN S T + S R S S R R + + L + EA + G M AR+ ++ + RDF +DYEML LDE H G S ++ LP TV+++ S C ICL A GDV+R LPCLH+FH+ +C+DPWL+R+ CPVCK Sbjct: 644 RRTRSQSSQNSSNITRTRVTHSTRMAQMRNQFFGGSHRVSTRQRNVNFPVHMDLDMRLDILEALEAAVGEMEDARMNRDILHSRRDFNENDYEMLLSLDE-------NNHRHAGASTNRINSLPQSTVQTD----SMEDPCAICLDTPAIGDVIRHLPCLHKFHK-DCIDPWLQRRTSCPVCK 814
BLAST of NO13G02570 vs. NCBI_GenBank
Match: XP_022924729.1 (uncharacterized protein LOC111432144 isoform X2 [Cucurbita moschata]) HSP 1 Score: 97.4 bits (241), Expect = 7.700e-17 Identity = 66/183 (36.07%), Postives = 90/183 (49.18%), Query Frame = 0 Query: 114 RLHRNSSTQNRSTSTCSPALVSDCFTWYRQSHTSSSSSPSYRLRRSDGNMRHLFGHHLAVQEAAALSGGMMNLARL--QLMLTTRDFTGDDYEMLSRLDEXXXXXXXXXXXHMGCSQEELDRLPVYTVESEWNGHSDNSKCLICLSDFAKGDVVRILPCLHQFHQAECVDPWLRRKMLCPVCK 295 R R+ S+QN S T + S R S S R R + + L + EA + G M AR+ ++ + RDF +DYEML LDE H G S ++ LP TV+++ S C ICL A GDV+R LPCLH+FH+ +C+DPWL+R+ CPVCK Sbjct: 587 RRTRSQSSQNSSNITRTRVTHSTRMAQMRNQFFGGSHRVSTRQRNVNFPVHMDLDMRLDILEALEAAVGEMEDARMNRDILHSRRDFNENDYEMLLSLDE-------NNHRHAGASTNRINSLPQSTVQTD----SMEDPCAICLDTPAIGDVIRHLPCLHKFHK-DCIDPWLQRRTSCPVCK 757
BLAST of NO13G02570 vs. NCBI_GenBank
Match: XP_022980220.1 (uncharacterized protein LOC111479662 isoform X1 [Cucurbita maxima]) HSP 1 Score: 97.4 bits (241), Expect = 7.700e-17 Identity = 66/183 (36.07%), Postives = 90/183 (49.18%), Query Frame = 0 Query: 114 RLHRNSSTQNRSTSTCSPALVSDCFTWYRQSHTSSSSSPSYRLRRSDGNMRHLFGHHLAVQEAAALSGGMMNLARL--QLMLTTRDFTGDDYEMLSRLDEXXXXXXXXXXXHMGCSQEELDRLPVYTVESEWNGHSDNSKCLICLSDFAKGDVVRILPCLHQFHQAECVDPWLRRKMLCPVCK 295 R R+ S+QN S T + S R S S R R + + L + EA + G M AR+ ++ + RDF +DYEML LDE H G S ++ LP TV+++ S C ICL A GDV+R LPCLH+FH+ +C+DPWL+R+ CPVCK Sbjct: 655 RRTRSQSSQNSSNITRTRVTHSTRMAQMRNQFFGGSHRVSTRQRNVNFPVHMDLDMRLDILEALEAAVGEMEDARMNRDILHSRRDFNENDYEMLLSLDE-------NNHRHAGASTNRINSLPQSTVQTD----SMEDPCAICLDTPAIGDVIRHLPCLHKFHK-DCIDPWLQRRTSCPVCK 825
BLAST of NO13G02570 vs. NCBI_GenBank
Match: XP_022980221.1 (uncharacterized protein LOC111479662 isoform X2 [Cucurbita maxima]) HSP 1 Score: 97.4 bits (241), Expect = 7.700e-17 Identity = 66/183 (36.07%), Postives = 90/183 (49.18%), Query Frame = 0 Query: 114 RLHRNSSTQNRSTSTCSPALVSDCFTWYRQSHTSSSSSPSYRLRRSDGNMRHLFGHHLAVQEAAALSGGMMNLARL--QLMLTTRDFTGDDYEMLSRLDEXXXXXXXXXXXHMGCSQEELDRLPVYTVESEWNGHSDNSKCLICLSDFAKGDVVRILPCLHQFHQAECVDPWLRRKMLCPVCK 295 R R+ S+QN S T + S R S S R R + + L + EA + G M AR+ ++ + RDF +DYEML LDE H G S ++ LP TV+++ S C ICL A GDV+R LPCLH+FH+ +C+DPWL+R+ CPVCK Sbjct: 617 RRTRSQSSQNSSNITRTRVTHSTRMAQMRNQFFGGSHRVSTRQRNVNFPVHMDLDMRLDILEALEAAVGEMEDARMNRDILHSRRDFNENDYEMLLSLDE-------NNHRHAGASTNRINSLPQSTVQTD----SMEDPCAICLDTPAIGDVIRHLPCLHKFHK-DCIDPWLQRRTSCPVCK 787
BLAST of NO13G02570 vs. NCBI_GenBank
Match: XP_023528405.1 (uncharacterized protein LOC111791348 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 97.1 bits (240), Expect = 1.000e-16 Identity = 66/183 (36.07%), Postives = 90/183 (49.18%), Query Frame = 0 Query: 114 RLHRNSSTQNRSTSTCSPALVSDCFTWYRQSHTSSSSSPSYRLRRSDGNMRHLFGHHLAVQEAAALSGGMMNLARL--QLMLTTRDFTGDDYEMLSRLDEXXXXXXXXXXXHMGCSQEELDRLPVYTVESEWNGHSDNSKCLICLSDFAKGDVVRILPCLHQFHQAECVDPWLRRKMLCPVCK 295 R R+ S+QN S T + S R S S R R + + L + EA + G M AR+ ++ + RDF +DYEML LDE H G S ++ LP TV++ +S C ICL A GDV+R LPCLH+FH+ +C+DPWL+R+ CPVCK Sbjct: 655 RRTRSQSSQNSSNITRARVTHSTRMAQMRNQFFGGSHRVSTRQRNVNFPVHMDLDMRLDILEALEAAVGEMEDARMNRDILHSRRDFNENDYEMLLSLDE-------NNHRHAGASTNRINSLPQSTVQT----NSMEDPCAICLDTPAIGDVIRHLPCLHKFHK-DCIDPWLQRRTSCPVCK 825 The following BLAST results are available for this feature:
BLAST of NO13G02570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02570 ID=NO13G02570|Name=NO13G02570|organism=Nannochloropsis oceanica|type=gene|length=2524bpback to top protein sequence of NO13G02570.1 >NO13G02570.1-protein ID=NO13G02570.1-protein|Name=NO13G02570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=298bpback to top Synonyms
Publications
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