NO13G02340, NO13G02340 (gene) Nannochloropsis oceanica

Overview
NameNO13G02340
Unique NameNO13G02340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4173
Alignment locationchr13:647877..652049 +

Link to JBrowse

Properties
Property NameValue
DescriptionFidgetin protein 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:647877..652049 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0005524ATP binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR015415Vps4_C
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
Homology
BLAST of NO13G02340 vs. NCBI_GenBank
Match: EWM21896.1 (fidgetin protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 520.0 bits (1338), Expect = 1.300e-143
Identity = 340/751 (45.27%), Postives = 395/751 (52.60%), Query Frame = 0
Query:   40 LSFLEAALAHLALADGPLSEEEQVQKLSLHALVQQERLATVEEEMRKPSFPPASVEAVESEVMLTPESLGGTTFLAEPKDVLALLVPEEDPDIRRFTSPPQQRKQSPQVVRNRPMQLPPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPPGPARASILQSSTSLAEAFPPQSAPSXXXXXXXXXXXXXXXXXXXXXXSTRSHSLAHATVKLRXXXXXXXXXXXXXXXXAYTKHFNTAGELRDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSLFSDHMA---PGRNSGSNSQADNQGWGGHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIRGVVDRTFKGS-GQXXXXXXXXXXXXXXXDELPEELKGCDPLMVERIELEIIDRGQPVTFDDIAGLEFAKKTIIELIVWPMKNPQLFQGLRALPRGLLLFGPPGTGKTLIAKAIAHQSGATFFNISASSLTSKWIGEGEKLVRVLFKLAAYRSPAIIFIDEVDSLLCQRSADENEASRRLKTEFLVQLDGCGSAAAAARVLLIGATNRPQELDEAARRRFVKRLYIDLPEALARRNLIEILLRKNSHNLTSSEIEQVVAQSKGFSGSDVHQLCTEAAMGPIRDMTARIGGDISAIDLSDIPPISFLHFREALSSVRPSVSEKDLGTLLDWNDEFGTYSRGVCGAGQ 787
            L  LE ALA  ALA GPL+ +   Q+ +L  LVQQERL  V++++++   P AS  A    V +T E L   +FL + +DVLAL+   + P        P        VV  +       +                                     APP  +R   + S+ S+     P S                          T SH  A    K                  AYT HF+TAGELRDK                                                       S F         G+  G  + +  Q   G                                                                 GI G+V+  F+GS  Q               +ELPEELKGCDPL++ERIE EIIDRG PVTFDDIAGL FAK+TI+ELI WPM  P +F GLRALPRGLLLFGPPGTGKTLIAKAIAHQSGATFFNISASSLTSKWIGEGEKLVR LF+LAAY SP+I+FIDEVDSLLCQRSADENEASRR+KTEFLVQLDGCGSAAAAARVLL+GATNRPQELDEAARRRFVKRLYI LPEA AR  LI +LLR N+H LT  EIEQVV +S+GFSGSDVHQLCTEAAMGPIRDMTA + GDI+A+ ++D+PPI F HF EALS++RPSVSEKDL TLL WND+FGT+SR  C  G+
Sbjct:   45 LCLLEVALAKQALAAGPLTNKITCQQRALRVLVQQERLKIVQQQVQEYPLPEASSTA--ERVTVTSELLSDASFLTDEEDVLALMTRWDGP-------TPSHESPLQNVVMEQGR--TSVIKEYRTKERQDAAALKNLLQHHHLSDSTLTEVQRQGPFAPPTSSRQPHVISNVSIQHFRSPVS---------------------YGGAVTSSHHDALVPQKPVPFSRQENEDAQQKQRPAYTSHFSTAGELRDKSRKRPFAGAESGRGALSGFGREGGRGEDSAELQHSLLSSREERPLPEPAKANAEQSKFMFSTCIRQSGKTCGGPNWSQAQERSG--PSTSWIQPPSRSCMLQQNEENMSRAGPPAPVSAPSRVMKKFVPPVKGSSETNGRGGASVGGKKGISGMVENAFRGSVQQPQAQRHGTSGDKGPGEELPEELKGCDPLLIERIEQEIIDRGDPVTFDDIAGLAFAKQTILELICWPMSRPDIFTGLRALPRGLLLFGPPGTGKTLIAKAIAHQSGATFFNISASSLTSKWIGEGEKLVRTLFRLAAYMSPSIVFIDEVDSLLCQRSADENEASRRMKTEFLVQLDGCGSAAAAARVLLVGATNRPQELDEAARRRFVKRLYIPLPEAEARHALIVLLLRTNNHQLTPQEIEQVVTRSRGFSGSDVHQLCTEAAMGPIRDMTAGLAGDITALAVADVPPIQFRHFLEALSTLRPSVSEKDLDTLLAWNDDFGTFSRQKCNVGE 761          
BLAST of NO13G02340 vs. NCBI_GenBank
Match: CBJ31305.1 (putative; AAA family ATP ase [Ectocarpus siliculosus])

HSP 1 Score: 401.7 bits (1031), Expect = 5.200e-108
Identity = 197/308 (63.96%), Postives = 247/308 (80.19%), Query Frame = 0
Query:  472 LPEELKGCDPLMVERIELEIIDRGQPVTFDDIAGLEFAKKTIIELIVWPMKNPQLFQGLRALPRGLLLFGPPGTGKTLIAKAIAHQSGATFFNISASSLTSKWIGEGEKLVRVLFKLAAYRSPAIIFIDEVDSLLCQRSADENEASRRLKTEFLVQLDGCGSAAAAARVLLIGATNRPQELDEAARRRFVKRLYIDLPEALARRNLIEILLRKNSHNLTSSEIEQVVAQSKGFSGSDVHQLCTEAAMGPIRDMTARIGGDISAIDLSDIPPISFLHFREALSSVRPSVSEKDLGTLLDWNDEFGTYSR 780
            LPEEL+  +  MV++I  E+  +G PVTFD IAGLEFAKK++IEL+ WPM+ P +F GLR+LP+GLLLFGPPGTGKTLI KAIAHQSGATFF+ISASSL SKWIGEGEK+VR LF +A Y  PA+IFIDEVDS+L  RSADENEASRRLKTEFL+QLDG G+  AA RVL++GATNRPQELDEAARRRFVKRLY+ LP+   RR L+ ILL+ +  +LT+ ++E VV  ++GFSG+D+H LCTEAAMGP+RD    +G +I ++ +SD+PP+   HF EA  S+RPSV  +++   L WN+EFG++ R
Sbjct:  210 LPEELQHLEKAMVDKILQEVQQKGDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLFAVAGYHQPAVIFIDEVDSMLSMRSADENEASRRLKTEFLIQLDGAGT-KAADRVLVVGATNRPQELDEAARRRFVKRLYVPLPDKSGRRQLMNILLKTSVSSLTAEDVETVVEGTEGFSGADLHALCTEAAMGPVRD----LGSNICSVKVSDVPPMETRHFTEARQSMRPSVGAEEITHYLKWNEEFGSFKR 512          
BLAST of NO13G02340 vs. NCBI_GenBank
Match: XP_002291462.1 (AAA domain protein, partial [Thalassiosira pseudonana CCMP1335] >EED91569.1 AAA domain protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 391.7 bits (1005), Expect = 5.300e-105
Identity = 188/309 (60.84%), Postives = 246/309 (79.61%), Query Frame = 0
Query:  470 DELPEELKGCDPLMVERIELEIIDRGQPVTFDDIAGLEFAKKTIIELIVWPMKNPQLFQGLRALPRGLLLFGPPGTGKTLIAKAIAHQSGATFFNISASSLTSKWIGEGEKLVRVLFKLAAYRSPAIIFIDEVDSLLCQRSADENEASRRLKTEFLVQLDGCGSAAAAARVLLIGATNRPQELDEAARRRFVKRLYIDLPEALARRNLIEILLRKNSHNLTSSEIEQVVAQSKGFSGSDVHQLCTEAAMGPIRDMTARIGGDISAIDLSDIPPISFLHFREALSSVRPSVSEKDLGTLLDWNDEFGTYS 779
            +ELP+EL+G D  ++E+IE EI+D G+ VTFDDIAGL+ AK T+ E++VWPM+ P++F GLRA P+GLLLFGPPGTGKTLI KAIAH+SGATFF+IS+SSLTSKWIGEGEK+VR LF +A YRSPA++FIDEVDS+L  R ADENEASRR+KTEFLVQLDG G+++   +VL++GATNRPQELD+AARRRFVKRLY+ LP    R  L+  LL KNS++L+  EI ++   + GFSG+D+  LCT+AAMGP+R    ++G +  ++   DIPPIS+ HFR++L  + PSV+  DL   L+WN+ +G+ S
Sbjct:    2 EELPDELRGLDKDLIEKIENEIVDSGERVTFDDIAGLQNAKSTVFEMVVWPMQRPEMFTGLRATPKGLLLFGPPGTGKTLIGKAIAHESGATFFSISSSSLTSKWIGEGEKMVRTLFAVARYRSPAVVFIDEVDSMLTARKADENEASRRIKTEFLVQLDGAGNSSEGKQVLVVGATNRPQELDDAARRRFVKRLYVPLPAQPDRETLLRTLLAKNSNSLSDKEITKLSHDTDGFSGADLKNLCTDAAMGPLR----QLGPNAMSVAAEDIPPISYKHFRQSLRQMSPSVARADLDQYLEWNNTYGSKS 306          
BLAST of NO13G02340 vs. NCBI_GenBank
Match: XP_009824416.1 (hypothetical protein, variant 1 [Aphanomyces astaci] >ETV85943.1 hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 390.2 bits (1001), Expect = 1.600e-104
Identity = 197/308 (63.96%), Postives = 238/308 (77.27%), Query Frame = 0
Query:  470 DELPEELKGCDPLMVERIELEIIDRGQPVTFDDIAGLEFAKKTIIELIVWPMKNPQLFQGLRALPRGLLLFGPPGTGKTLIAKAIAHQSGATFFNISASSLTSKWIGEGEKLVRVLFKLAAYRSPAIIFIDEVDSLLCQRSADENEASRRLKTEFLVQLDGCGSAAAAARVLLIGATNRPQELDEAARRRFVKRLYIDLPEALARRNLIEILLRKNSHNLTSSEIEQVVAQSKGFSGSDVHQLCTEAAMGPIRDMTARIGGDISAIDLSDIPPISFLHFREALSSVRPSVSEKDLGTLLDWNDEFGTY 778
            D++   LK CDP ++ +IE+EI+D G PV+FDDIAGL FAKK + EL++WPM  P +F GLR+LP+GLLLFGPPGTGKTLI KAIA QSGATFF+ISASSLTSKWIGEGEKLVR LF +AA + P++IFIDE+DSLL QRS+ ENEASRR+KTEFLVQLDG G+ +    +L++GATNRPQELDEAARRRFVKRLYI LP A AR +L+  LL KN H+LT ++   +V +SKGFSG+DV  LCTEAAMGPIR+       DI  +   D+ PIS   F EAL   R SVS KDL   ++WN EFG+Y
Sbjct:  314 DDVDPRLKSCDPELISKIEMEIVDAGDPVSFDDIAGLSFAKKCVNELVIWPMARPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIATQSGATFFSISASSLTSKWIGEGEKLVRTLFAVAAVKQPSVIFIDEIDSLLSQRSSTENEASRRMKTEFLVQLDGAGTKSKDI-ILVVGATNRPQELDEAARRRFVKRLYIPLPSAEARLDLMNRLLAKNQHDLTDADKSHIVQRSKGFSGADVRSLCTEAAMGPIRNCV-----DIQTMQADDVRPISRRDFDEALRGTRSSVSVKDLQFYMEWNAEFGSY 615          
BLAST of NO13G02340 vs. NCBI_GenBank
Match: XP_008863973.1 (hypothetical protein H310_02296 [Aphanomyces invadans] >ETW07880.1 hypothetical protein H310_02296 [Aphanomyces invadans])

HSP 1 Score: 388.3 bits (996), Expect = 5.900e-104
Identity = 195/307 (63.52%), Postives = 238/307 (77.52%), Query Frame = 0
Query:  471 ELPEELKGCDPLMVERIELEIIDRGQPVTFDDIAGLEFAKKTIIELIVWPMKNPQLFQGLRALPRGLLLFGPPGTGKTLIAKAIAHQSGATFFNISASSLTSKWIGEGEKLVRVLFKLAAYRSPAIIFIDEVDSLLCQRSADENEASRRLKTEFLVQLDGCGSAAAAARVLLIGATNRPQELDEAARRRFVKRLYIDLPEALARRNLIEILLRKNSHNLTSSEIEQVVAQSKGFSGSDVHQLCTEAAMGPIRDMTARIGGDISAIDLSDIPPISFLHFREALSSVRPSVSEKDLGTLLDWNDEFGTY 778
            ++   LK CDP ++ +IE+EI+D G PV+FDDIAGL FAKK + EL++WPM  P +F GLR+LP+GLLLFGPPGTGKTLI KAIA QSGATFF+ISASSLTSKWIGEGEKLVR LF +AA + P++IFIDE+DSLL QRS+ ENEASRR+KTEFLVQLDG G+ +    +L++GATNRPQELDEAARRRFVKRLYI LP A AR +L+  LL KN HNLT+ +   +V +SKGFSG+DV  LCTEAAMGPIR+       DI  ++  D+ PIS   F +AL   R SVS KDL   ++WN EFG++
Sbjct:  313 DIDPRLKACDPELISKIEMEIVDAGDPVSFDDIAGLSFAKKCVNELVIWPMARPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIATQSGATFFSISASSLTSKWIGEGEKLVRTLFAVAAVKQPSVIFIDEIDSLLSQRSSTENEASRRMKTEFLVQLDGAGTKSKDV-ILVVGATNRPQELDEAARRRFVKRLYIPLPSAAARLDLMNRLLAKNKHNLTTEDKACIVQRSKGFSGADVRSLCTEAAMGPIRNCI-----DIQTMEADDVRPISREDFEDALRGTRSSVSMKDLQFYMEWNAEFGSF 613          
BLAST of NO13G02340 vs. NCBI_GenBank
Match: XP_008863974.1 (hypothetical protein, variant 1 [Aphanomyces invadans] >ETW07881.1 hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 388.3 bits (996), Expect = 5.900e-104
Identity = 195/307 (63.52%), Postives = 238/307 (77.52%), Query Frame = 0
Query:  471 ELPEELKGCDPLMVERIELEIIDRGQPVTFDDIAGLEFAKKTIIELIVWPMKNPQLFQGLRALPRGLLLFGPPGTGKTLIAKAIAHQSGATFFNISASSLTSKWIGEGEKLVRVLFKLAAYRSPAIIFIDEVDSLLCQRSADENEASRRLKTEFLVQLDGCGSAAAAARVLLIGATNRPQELDEAARRRFVKRLYIDLPEALARRNLIEILLRKNSHNLTSSEIEQVVAQSKGFSGSDVHQLCTEAAMGPIRDMTARIGGDISAIDLSDIPPISFLHFREALSSVRPSVSEKDLGTLLDWNDEFGTY 778
            ++   LK CDP ++ +IE+EI+D G PV+FDDIAGL FAKK + EL++WPM  P +F GLR+LP+GLLLFGPPGTGKTLI KAIA QSGATFF+ISASSLTSKWIGEGEKLVR LF +AA + P++IFIDE+DSLL QRS+ ENEASRR+KTEFLVQLDG G+ +    +L++GATNRPQELDEAARRRFVKRLYI LP A AR +L+  LL KN HNLT+ +   +V +SKGFSG+DV  LCTEAAMGPIR+       DI  ++  D+ PIS   F +AL   R SVS KDL   ++WN EFG++
Sbjct:  262 DIDPRLKACDPELISKIEMEIVDAGDPVSFDDIAGLSFAKKCVNELVIWPMARPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIATQSGATFFSISASSLTSKWIGEGEKLVRTLFAVAAVKQPSVIFIDEIDSLLSQRSSTENEASRRMKTEFLVQLDGAGTKSKDV-ILVVGATNRPQELDEAARRRFVKRLYIPLPSAAARLDLMNRLLAKNKHNLTTEDKACIVQRSKGFSGADVRSLCTEAAMGPIRNCI-----DIQTMEADDVRPISREDFEDALRGTRSSVSMKDLQFYMEWNAEFGSF 562          
BLAST of NO13G02340 vs. NCBI_GenBank
Match: XP_008863975.1 (hypothetical protein, variant 2 [Aphanomyces invadans] >ETW07882.1 hypothetical protein, variant 2 [Aphanomyces invadans])

HSP 1 Score: 388.3 bits (996), Expect = 5.900e-104
Identity = 195/307 (63.52%), Postives = 238/307 (77.52%), Query Frame = 0
Query:  471 ELPEELKGCDPLMVERIELEIIDRGQPVTFDDIAGLEFAKKTIIELIVWPMKNPQLFQGLRALPRGLLLFGPPGTGKTLIAKAIAHQSGATFFNISASSLTSKWIGEGEKLVRVLFKLAAYRSPAIIFIDEVDSLLCQRSADENEASRRLKTEFLVQLDGCGSAAAAARVLLIGATNRPQELDEAARRRFVKRLYIDLPEALARRNLIEILLRKNSHNLTSSEIEQVVAQSKGFSGSDVHQLCTEAAMGPIRDMTARIGGDISAIDLSDIPPISFLHFREALSSVRPSVSEKDLGTLLDWNDEFGTY 778
            ++   LK CDP ++ +IE+EI+D G PV+FDDIAGL FAKK + EL++WPM  P +F GLR+LP+GLLLFGPPGTGKTLI KAIA QSGATFF+ISASSLTSKWIGEGEKLVR LF +AA + P++IFIDE+DSLL QRS+ ENEASRR+KTEFLVQLDG G+ +    +L++GATNRPQELDEAARRRFVKRLYI LP A AR +L+  LL KN HNLT+ +   +V +SKGFSG+DV  LCTEAAMGPIR+       DI  ++  D+ PIS   F +AL   R SVS KDL   ++WN EFG++
Sbjct:  256 DIDPRLKACDPELISKIEMEIVDAGDPVSFDDIAGLSFAKKCVNELVIWPMARPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIATQSGATFFSISASSLTSKWIGEGEKLVRTLFAVAAVKQPSVIFIDEIDSLLSQRSSTENEASRRMKTEFLVQLDGAGTKSKDV-ILVVGATNRPQELDEAARRRFVKRLYIPLPSAAARLDLMNRLLAKNKHNLTTEDKACIVQRSKGFSGADVRSLCTEAAMGPIRNCI-----DIQTMEADDVRPISREDFEDALRGTRSSVSMKDLQFYMEWNAEFGSF 556          
BLAST of NO13G02340 vs. NCBI_GenBank
Match: XP_008604282.1 (hypothetical protein SDRG_00578 [Saprolegnia diclina VS20] >EQC42859.1 hypothetical protein SDRG_00578 [Saprolegnia diclina VS20])

HSP 1 Score: 385.2 bits (988), Expect = 5.000e-103
Identity = 194/308 (62.99%), Postives = 239/308 (77.60%), Query Frame = 0
Query:  470 DELPEELKGCDPLMVERIELEIIDRGQPVTFDDIAGLEFAKKTIIELIVWPMKNPQLFQGLRALPRGLLLFGPPGTGKTLIAKAIAHQSGATFFNISASSLTSKWIGEGEKLVRVLFKLAAYRSPAIIFIDEVDSLLCQRSADENEASRRLKTEFLVQLDGCGSAAAAARVLLIGATNRPQELDEAARRRFVKRLYIDLPEALARRNLIEILLRKNSHNLTSSEIEQVVAQSKGFSGSDVHQLCTEAAMGPIRDMTARIGGDISAIDLSDIPPISFLHFREALSSVRPSVSEKDLGTLLDWNDEFGTY 778
            +++   LK CDP ++ +IELEI+D G P++FDDIAGL FAKK + EL++WPM  P +F GLR+LP+GLLLFGPPGTGKTLI KAIA QSGATFF+ISASSLTSKWIGEGEKLVR LF +AA + P++IFIDE+DSLL QRS+ ENEASRR+KTEFLVQLDG G+ +    +L++GATNRPQELDEAARRRFVKRLYI LP A AR ++I  LL KN H L  ++++ +V +++GFSG+DV  LCTEAAMGPIR+       DI  +D + + PI    F  AL  VRPSVS KDL   L+WN EFG+Y
Sbjct:  276 EDIDPRLKSCDPELISKIELEIVDAGDPISFDDIAGLHFAKKCVNELVIWPMARPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIATQSGATFFSISASSLTSKWIGEGEKLVRTLFAVAAVKQPSVIFIDEIDSLLTQRSSTENEASRRMKTEFLVQLDGAGTKSKDI-ILVVGATNRPQELDEAARRRFVKRLYIPLPSAEARLDMILRLLAKNKHRLEQTDLDYIVERTRGFSGADVRALCTEAAMGPIRNC-----DDIRTMDAALVRPIERHDFDAALRGVRPSVSGKDLEFYLEWNTEFGSY 577          
BLAST of NO13G02340 vs. NCBI_GenBank
Match: OQS06801.1 (fidgetin, partial [Thraustotheca clavata])

HSP 1 Score: 385.2 bits (988), Expect = 5.000e-103
Identity = 196/308 (63.64%), Postives = 238/308 (77.27%), Query Frame = 0
Query:  470 DELPEELKGCDPLMVERIELEIIDRGQPVTFDDIAGLEFAKKTIIELIVWPMKNPQLFQGLRALPRGLLLFGPPGTGKTLIAKAIAHQSGATFFNISASSLTSKWIGEGEKLVRVLFKLAAYRSPAIIFIDEVDSLLCQRSADENEASRRLKTEFLVQLDGCGSAAAAARVLLIGATNRPQELDEAARRRFVKRLYIDLPEALARRNLIEILLRKNSHNLTSSEIEQVVAQSKGFSGSDVHQLCTEAAMGPIRDMTARIGGDISAIDLSDIPPISFLHFREALSSVRPSVSEKDLGTLLDWNDEFGTY 778
            +++   LK CDP ++ +IELEI+D G P++FDDIAGL FAKK + EL++WPM  P +F GLR LP+GLLLFGPPGTGKTLI KAIA QSGATFF+ISASSLTSKWIGEGEKLVR LF +AA + P++IFIDE+DSLL QRS+ ENEASRR+KTEFLVQLDG G+ +    +L++GATNRPQELDEAARRRFVKRLYI LP A AR ++I+ LL KN H+L  S++  VV  ++GFSG+DV  LCTEAAMGPIR  T     DI  +D  ++  IS   F +AL  VR SVS KDL   L+WN EFG+Y
Sbjct:  169 EDIDPRLKSCDPELISKIELEIVDAGDPISFDDIAGLHFAKKCVNELVIWPMARPDIFTGLRTLPKGLLLFGPPGTGKTLIGKAIATQSGATFFSISASSLTSKWIGEGEKLVRTLFAVAAVKQPSVIFIDEIDSLLTQRSSTENEASRRMKTEFLVQLDGAGTKSKDI-ILVVGATNRPQELDEAARRRFVKRLYIPLPSAEARLDMIQRLLSKNKHDLQLSDMNYVVECTRGFSGADVRALCTEAAMGPIRTCT-----DIRTMDAENVRSISKEDFDDALRGVRSSVSTKDLQFYLEWNTEFGSY 470          
BLAST of NO13G02340 vs. NCBI_GenBank
Match: ETI31021.1 (hypothetical protein F443_21946 [Phytophthora parasitica P1569] >ETK71402.1 hypothetical protein L915_21341 [Phytophthora parasitica] >ETL24841.1 hypothetical protein L916_21212 [Phytophthora parasitica] >ETL78058.1 hypothetical protein L917_21066 [Phytophthora parasitica] >ETM31323.1 hypothetical protein L914_21080 [Phytophthora parasitica] >ETO59726.1 hypothetical protein F444_21965 [Phytophthora parasitica P1976] >ETP00816.1 hypothetical protein F441_21831 [Phytophthora parasitica CJ01A1] >ETP28962.1 hypothetical protein F442_21809 [Phytophthora parasitica P10297])

HSP 1 Score: 383.3 bits (983), Expect = 1.900e-102
Identity = 190/303 (62.71%), Postives = 237/303 (78.22%), Query Frame = 0
Query:  476 LKGCDPLMVERIELEIIDRGQPVTFDDIAGLEFAKKTIIELIVWPMKNPQLFQGLRALPRGLLLFGPPGTGKTLIAKAIAHQSGATFFNISASSLTSKWIGEGEKLVRVLFKLAAYRSPAIIFIDEVDSLLCQRSADENEASRRLKTEFLVQLDGCGSAAAAARVLLIGATNRPQELDEAARRRFVKRLYIDLPEALARRNLIEILLRKNSHNLTSSEIEQVVAQSKGFSGSDVHQLCTEAAMGPIRDMTARIGGDISAIDLSDIPPISFLHFREALSSVRPSVSEKDLGTLLDWNDEFGTYS 779
            LK CDP ++E+IE+EI+D G P+TFDDIAGL+FAKK + EL++WPM  P +F GLR+LP+GLLLFGPPGTGKTLI KAIA QSGATFF+ISASSLTSKWIG+GEKLVR LF +AA + P++IFIDE+DSLL QRS++ENEASRR+KTEFLVQLDG G+ A    +L++GATNRPQELDEAARRRFVKRLYI LP   AR +L+  LL+ N ++LT      +   +KG+SG+DV  LCTEAAMGPIR+ T     DI  +D   + PI+   F+EAL  VR SV+ KDL    +WN+EFG+++
Sbjct:  331 LKSCDPELIEKIEMEIVDNGDPITFDDIAGLQFAKKCVNELVIWPMARPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIASQSGATFFSISASSLTSKWIGQGEKLVRTLFAVAAVKQPSVIFIDEIDSLLTQRSSEENEASRRMKTEFLVQLDGAGTKAKDI-ILVVGATNRPQELDEAARRRFVKRLYIPLPSFEARLDLVSRLLKDNKNDLTDENKAFIAESTKGYSGADVRALCTEAAMGPIRNCT-----DIRTMDADSVRPINLDDFKEALRGVRSSVAVKDLAFYKEWNEEFGSFA 627          
The following BLAST results are available for this feature:
BLAST of NO13G02340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21896.11.300e-14345.27fidgetin protein 1 [Nannochloropsis gaditana][more]
CBJ31305.15.200e-10863.96putative; AAA family ATP ase [Ectocarpus siliculos... [more]
XP_002291462.15.300e-10560.84AAA domain protein, partial [Thalassiosira pseudon... [more]
XP_009824416.11.600e-10463.96hypothetical protein, variant 1 [Aphanomyces astac... [more]
XP_008863973.15.900e-10463.52hypothetical protein H310_02296 [Aphanomyces invad... [more]
XP_008863974.15.900e-10463.52hypothetical protein, variant 1 [Aphanomyces invad... [more]
XP_008863975.15.900e-10463.52hypothetical protein, variant 2 [Aphanomyces invad... [more]
XP_008604282.15.000e-10362.99hypothetical protein SDRG_00578 [Saprolegnia dicli... [more]
OQS06801.15.000e-10363.64fidgetin, partial [Thraustotheca clavata][more]
ETI31021.11.900e-10262.71hypothetical protein F443_21946 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02340.1NO13G02340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02340.1NO13G02340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02340 ID=NO13G02340|Name=NO13G02340|organism=Nannochloropsis oceanica|type=gene|length=4173bp
ATTGTTCTGCAGGTTTTTCCGTTCGAGCACTTCCGAAGACCCTCCCCAGA
AGAAGACGTGCATATCATCAGAAACCAGGCTCTGCAGTACCAAGGTCTTA
GTTTGCTTGATGGCACTATTTTTATAAGCTCCATTTCCCCCCCAAAAAAA
TACTCCCCACAAGCATCAAACAGCCCGTACGCATCCTCAGGATTGGAATG
ATGAAGGCCCATGAACTGTGTTATAATGCACAAGACCGCCTGTGCATGTC
TCCCTGAAACCCTGCAACGTTTCTCTCAAGAAATTTATCGCATATGCCCA
CCCGAAAGTCGCAACGTGCTTCGCACATCGACCACTGCTGCCGCTTATCC
TAGGCTCCGCCCATCGACCCTTTTCCTGGACAACAGCTTCAAGACTTCCC
ATGATATAAAAATAGTGAAGTTGCTTTGGCCACTTGTCACAATGTCGGGG
TGGCATCCTTGAAAAGCTATTTTTCCAGCTTGATGGTGAAAGGCAGGGGC
TCATGTTCGACCGGCCCACAGCCAATTTGAAGGAGCTCGGCATCTTGAGC
TTGCAGGCACGCGATGATATTTGTCCATGAAAGGGATCCATATGTGGGTT
GTGTAGTGAGAGGATGCGTCATGGCATGGGTTCAAGTCGCCATCGCTGTC
CGACAGCTCTCTTTGCACGTCTTGTTCTTTTCTTTCTGCTTCCTCTAAAT
TCCTATATTTGAGTCACGTTGCATGATTTCTCTGTTCACCCATATGTTGG
TGGCAGCAAATTAAGACTCCGAACAAGCTTAACTTCGCCTACAAGCTGTT
CTTCGATTCGATGCTTTTCACCCGATCCGATCGTCCAATACTATCACTTT
GTTCATGGAGAGCATCACGTCATCACGGGTCTGTACCCCGTACCCACCCC
CTGTGGCTTTGTCTTTGGCAATCCAGATCGTAGTTTGGCGAGGCTTGCAA
ATTTTTTCGCATCGAATTCCGGGGGAGCCGTGTCGTGGAGATTGTGTGTC
ATGCTATGTTCCGAATACACAAGCCCTCGACGTGGAGCCTGGCCGTGGAC
GCCTTGTTAACCAAGGATACAAAACGACGCAAAATAAGGGGAACAAAAAT
CGGCACGCTGATTGCAGTTGTAGGGCAGTAACATGTTTATTGTCGTTCGA
GAGCCCCGAACGCCACGCGCGACGGCCGCCTTGCTGGCTGTCAGGTAGGG
GATATAGCTCTACTCGTTGCTACCACCTTCCATTCCCTTTCGTCCGACAC
CGGTCACTGGCAGCTCTCGGGATGATACTGATGCATCGCACGCCGCTGCA
GACCCAGACATAGGCTACACGCTGGGATACGTGGCGTCGACCTTGTTTCA
AGTGGCAATGAAGGTGGATTTGTCGCAGGGAGAGCTACGGCTGGCTTCAA
GTTGTTGTCATGTATTTATTTCATGAAAGCACGCACATAGATATATCCCG
TACAGGCTGTGGCGAATCAATAATACCAAACCTCCCCAACGTCCTCATGC
CGTCAAGACGAACGACATGCCCGCGTTCTTCTGATGCCCCTTTGCTCTTG
TCCTCACTCTTTTCGTCCGTCCTCCCTGCTTCTAATTTTATCTTTCCTGT
TCTATCGAAACACCGCCATTTTCTGTCACACGCACAGGCGTTGTGCGTGC
CCTAAAACTTCCCCGCCCTGACCGTTGCATGGCCACAGCAGCAGCCTCTT
TTTTTGGCGAGAGAGGTTCCGTGATGGCCTCCTCCCTTTTCTTACAGCGC
TTCATGGCTTTGATGTCAACAGCACCCGACGCGGCTCACCAGCGACTGAG
CTTTTTGGAGGCGGCCCTTGCTCATTTGGCTCTAGCGGACGGTCCTCTCT
CTGAGGAAGAGCAAGTGCAAAAGCTATCACTTCATGCCCTGGTTCAGCAA
GAACGCCTAGCAACAGTCGAAGAAGAAATGCGGAAGCCGTCATTCCCTCC
TGCATCGGTCGAGGCTGTAGAGTCCGAGGTGATGCTAACGCCCGAGTCCT
TGGGAGGCACCACCTTCTTGGCTGAGCCTAAAGACGTGCTCGCCCTCCTT
GTCCCTGAAGAAGACCCTGATATTCGTCGGTTTACGTCGCCTCCCCAGCA
GCGGAAGCAGTCCCCGCAAGTCGTACGGAATCGGCCTATGCAGCTGCCAC
CTCAGCTACCACAACAACAGCGCCAAGAGCAGGTGTCAGCACTACGACTT
CCACCCAAGCAAGCGCATCGACATCTGCCGCCTCAGCAGGAGCACAAGCG
GCACCAAAAACTTCACCAAGCCCCTCCCGGACCCGCGCGCGCGTCTATTC
TCCAATCCTCAACCAGTTTGGCCGAGGCCTTTCCACCACAATCTGCACCA
TCGCCACGCTATCTCCCTCCCTCCGCATCGCGCCCGCCCTCGGCCCCCAT
CCAACCTCCTACTCCTCTTTCTACTCGTTCTCATTCTCTGGCACATGCCA
CCGTGAAACTGCGTCGGGAAGAGCAGCAACAATGGCTGCCACAGCAGGAG
CAGCCACCCCCAGCGTATACTAAGCACTTTAATACAGCGGGAGAATTGCG
GGACAAGAATAAGAAGCGGCCCTACGGTGCAGGAGGAGGAGGTGGAGGCG
GAGGAGGTGGAGGCGGAAGAGATAGACAGGGCCCCAACCGACCCCCACCC
TCGCTTCCAGCGAACTACCACCAGAAGCAGCAGCAGCACCAGCATCACCA
ACAGCACCAGCATCAGCTGCCTTCCTTGTTTTCCGATCACATGGCTCCCG
GCCGGAACAGTGGGAGCAATAGCCAGGCGGACAACCAGGGGTGGGGGGGG
CACCAGCAGCCACAGCGACCGATGCACCACCAACAGCAGTACGTGCGACA
AAACTCGAAAGAAGGTGAAGAGAGTGCTCATTATGACCCCTCTCCTCCTG
TGGCTCCTCCAGTCACGTCTCGGGTGATGAAGAAGTTCGTTCCGCCAGTC
AAGGGGGGGGGGGAGGGAGGGGGCGGAGGAGCAGGAGGAGGGAAAGGCAT
CCGAGGCGTGGTTGACCGGACTTTCAAGGGTTCGGGGCAGCAACGGAATG
GAGGGGGAAAAGAAGGAGGGGGAGGGCAGGATGGCGACGAGTTGCCCGAG
GAGTTGAAGGGATGCGACCCTTTAATGGTTGAACGGATCGAGTTAGAGAT
TATCGATAGGGGGCAGCCTGTAACGTTTGATGACATAGCGGGCCTGGAGT
TTGCGAAAAAGACGATCATCGAGTTGATTGTGTGGCCGATGAAGAATCCC
CAGTTATTCCAAGGACTACGGGCGCTGCCACGCGGACTCTTGTTGTTTGG
CCCGCCAGGCACAGGAAAGACGCTCATTGCCAAGGCGATCGCGCACCAGT
CCGGTGCCACCTTCTTTAACATTTCCGCCTCCTCGCTCACCTCCAAATGG
ATTGGGGAAGGAGAGAAGCTGGTACGTGTCTTGTTTAAGCTGGCAGCTTA
TCGCAGTCCGGCCATCATCTTTATCGATGAGGTCGACTCTCTTCTCTGTC
AACGAAGCGCCGATGAGAACGAGGCCAGTCGTAGGCTTAAGACGGAGTTT
CTCGTGCAGCTGGACGGATGCGGGAGTGCAGCAGCAGCAGCACGTGTCTT
GCTGATTGGCGCGACCAATCGCCCGCAAGAGCTGGACGAGGCTGCAAGGC
GTCGTTTTGTGAAAAGATTATACATTGATCTACCTGAAGCTTTGGCCCGA
CGAAATTTGATAGAAATTCTTCTCCGGAAGAATAGCCACAACCTCACATC
AAGCGAAATCGAGCAAGTTGTCGCTCAATCAAAAGGCTTCAGTGGCTCTG
ACGTGCATCAGCTGTGTACAGAAGCAGCCATGGGACCCATTCGTGACATG
ACGGCGCGAATCGGCGGAGACATAAGCGCCATTGACTTAAGTGACATCCC
TCCCATTTCTTTCTTACATTTCCGGGAGGCCTTGTCATCGGTCCGGCCCT
CGGTGAGCGAGAAAGATTTGGGTACGTTGTTGGATTGGAACGATGAGTTT
GGGACGTACTCAAGGGGGGTTTGCGGGGCGGGGCAGGCGCAAGAGATGCA
AGGTGTAGCGGTGAAGCAGCAGGACAGGGGAGAGTGAAAATGTGTTTTTG
GGAGTGCGAGAAGGCAAATAGGCTTTGGAGGATGAGAAATGAAGGGAAGA
ACTGAAGCAAAGGGTTAGGGTTC
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protein sequence of NO13G02340.1

>NO13G02340.1-protein ID=NO13G02340.1-protein|Name=NO13G02340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=803bp
MATAAASFFGERGSVMASSLFLQRFMALMSTAPDAAHQRLSFLEAALAHL
ALADGPLSEEEQVQKLSLHALVQQERLATVEEEMRKPSFPPASVEAVESE
VMLTPESLGGTTFLAEPKDVLALLVPEEDPDIRRFTSPPQQRKQSPQVVR
NRPMQLPPQLPQQQRQEQVSALRLPPKQAHRHLPPQQEHKRHQKLHQAPP
GPARASILQSSTSLAEAFPPQSAPSPRYLPPSASRPPSAPIQPPTPLSTR
SHSLAHATVKLRREEQQQWLPQQEQPPPAYTKHFNTAGELRDKNKKRPYG
AGGGGGGGGGGGGRDRQGPNRPPPSLPANYHQKQQQHQHHQQHQHQLPSL
FSDHMAPGRNSGSNSQADNQGWGGHQQPQRPMHHQQQYVRQNSKEGEESA
HYDPSPPVAPPVTSRVMKKFVPPVKGGGEGGGGGAGGGKGIRGVVDRTFK
GSGQQRNGGGKEGGGGQDGDELPEELKGCDPLMVERIELEIIDRGQPVTF
DDIAGLEFAKKTIIELIVWPMKNPQLFQGLRALPRGLLLFGPPGTGKTLI
AKAIAHQSGATFFNISASSLTSKWIGEGEKLVRVLFKLAAYRSPAIIFID
EVDSLLCQRSADENEASRRLKTEFLVQLDGCGSAAAAARVLLIGATNRPQ
ELDEAARRRFVKRLYIDLPEALARRNLIEILLRKNSHNLTSSEIEQVVAQ
SKGFSGSDVHQLCTEAAMGPIRDMTARIGGDISAIDLSDIPPISFLHFRE
ALSSVRPSVSEKDLGTLLDWNDEFGTYSRGVCGAGQAQEMQGVAVKQQDR
GE*
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Synonyms
Publications