NO13G02330, NO13G02330 (gene) Nannochloropsis oceanica

Overview
NameNO13G02330
Unique NameNO13G02330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2054
Alignment locationchr13:645809..647862 -

Link to JBrowse

Properties
Property NameValue
DescriptionAtpase family aaa domain-containing protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:645809..647862 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO13G02330 vs. NCBI_GenBank
Match: EWM21895.1 (atpase family aaa domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 603.2 bits (1554), Expect = 7.300e-169
Identity = 314/444 (70.72%), Postives = 364/444 (81.98%), Query Frame = 0
Query:   61 MFRRVSSSRE--VSENSNG------RGIDKRAIGALVVEFALTALGYYILYQSTKGLIGMIDPTKKDKDSVAQTKEALAKKLNRPDIARMDLTAYERMIAEEVLDPDQLDGGFDTIGGLEQQKREIFELAVLPLKRPDLFNKRGRLLSSPKGLLFYGAPGTGKTMLAKAIARESGAAFINLRMSTLMNKYFGESNKLVAAVFSLAYKLAPSIIFIDEIESFLRARGGNDEAPWISLKAEFMTLWDGVLTDSAVPIMVLGASNRPYDLDPAILRRLPRQFEIPLPGPSERAHILQLLLKEEHIDLQSVKVERLAADTDGYSGSDLKEMCRAAVMIPIRDVMPMPANGSLNTLDVESIQSADFRMVKMADFHVAMKRVKPTGHAAQDYQQREGAQAVNTARMTPAFMNAALSMFLHSVMQGGGGQAPQGPPGSANGHDGNNGWPNG 497
            M RR S +R   V E   G      RG DKRAIG +++E++L   GYYILY S  G++ M+DP KKD+ +  QTKEAL KK +R +IAR+DL+ YER+IA EVLD +QL+GGFDTIGGLEQQKREIFELAVLPLKRPDLFNKRG+LL SPKG+LFYGAPGTGKTMLAKAIARESGAAFINLRMSTL NKYFGESNKLV+AVFSLA KLAP+IIFIDEIESFLR RG  D+APWISLKAEFMTLWDG+LT+SAVPIMVLGASNRPYDLDPAILRRLPRQFEIPLP P +RA IL+LLLKEEH+D +SVK+  LAA+T+GYSGSDLKE+CRAAVM+P+RDVM +PA GSL  LDV+ +Q+   R V M D   AMKRVKPTGHAAQDY++RE A A +TA ++PAFMN ALS+ L S++Q   G  PQ  PG+A+G  G +G  NG
Sbjct:    1 MLRRASIARNFPVLEKVAGGRRNAERGQDKRAIGVVLLEWSLMVAGYYILYLSVNGIVTMMDPVKKDRGAGVQTKEALGKKADRSEIARLDLSPYERIIAHEVLDAEQLEGGFDTIGGLEQQKREIFELAVLPLKRPDLFNKRGKLLGSPKGILFYGAPGTGKTMLAKAIARESGAAFINLRMSTLTNKYFGESNKLVSAVFSLANKLAPTIIFIDEIESFLRVRGRGDDAPWISLKAEFMTLWDGILTESAVPIMVLGASNRPYDLDPAILRRLPRQFEIPLPDPKQRAEILRLLLKEEHVDYESVKLGALAAETEGYSGSDLKELCRAAVMMPVRDVMYLPAGGSLTALDVDGLQAEHLRQVTMEDLRNAMKRVKPTGHAAQDYERRESAHAEHTAHISPAFMNTALSLLLQSLVQ---GHVPQ-VPGAAHGQAGGDGRSNG 440          
BLAST of NO13G02330 vs. NCBI_GenBank
Match: GBG28793.1 (26S proteasome regulatory subunit 8-like [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 318.2 bits (814), Expect = 4.700e-83
Identity = 167/359 (46.52%), Postives = 241/359 (67.13%), Query Frame = 0
Query:   88 LVVEFALTALGYYILYQSTKGLIGMIDPTKKDKDSVAQTKEALAKKLNRPDIARMDLTAYERMIAEEVLDPDQLDGGFDTIGGLEQQKREIFELAVLPLKRPDLFNKRGRLLSSPKGLLFYGAPGTGKTMLAKAIARESGAAFINLRMSTLMNKYFGESNKLVAAVFSLAYKLAPSIIFIDEIESFLRARGGNDEAPWISLKAEFMTLWDGVLTDSA-----VPIMVLGASNRPYDLDPAILRRLPRQFEIPLPGPSERAHILQLLLKEEHID--LQSVKVERLAADTDGYSGSDLKEMCRAAVMIPIRD-VMPMPANGSLNTLDVESIQSADFRMVKMADFHVAMKRVKPTGHAAQDY 439
            L +E A   L Y +L+   + L+  +DP ++ K    + K  L +KL         +  YE +IA +++ P+ +D  F+ IGGL++ K EIF++  LPL+RPDLF  R +LLS PKG+L +G PGTGKTM+AKAIARESGAAFINL+MST MNK+FGES KL+ A FSLA+KLAP ++FIDEI+SF+R R  +D +   ++K+EF+ LWDG+LT +A       ++V+GA+NRP+D+DPAILRR+PR F++ LP   +R  IL++ L++E +D  L+   + +LA   +GYSGSD+KE+C+AA M+P R+      ANG+L        ++   R + + DF  AMK V+ TG AA +Y
Sbjct:   41 LAIEMASITLSYSLLFFGVRYLMREMDPQRQAKQQGDEHKRKLMQKLTENGREGFAMDDYEAIIANDLIYPEDIDVTFEMIGGLDEVKTEIFDIVALPLQRPDLFVGRSKLLSPPKGILLFGPPGTGKTMMAKAIARESGAAFINLQMSTTMNKWFGESQKLIRATFSLAWKLAPCVVFIDEIDSFMRERSSDDPSAQANMKSEFLALWDGMLTQNAPHGGGYGVIVVGATNRPWDIDPAILRRMPRTFKLDLPSMEQRLQILKIYLQDEDLDSSLRGGDMVKLAQLLNGYSGSDIKELCQAAAMLPFREFARECRANGNLQP------ETKRLRKLTIRDFLNAMKDVRATGQAAYEY 393          
BLAST of NO13G02330 vs. NCBI_GenBank
Match: CCA26236.1 (ATPase putative [Albugo laibachii Nc14])

HSP 1 Score: 314.3 bits (804), Expect = 6.700e-82
Identity = 177/388 (45.62%), Postives = 246/388 (63.40%), Query Frame = 0
Query:   61 MFRRVSSSREVSENS-----NGRGIDKRAIGALVVEFALTALGYYILYQSTKGLIGMIDPTKKDKDSVAQTKEALAKKLNRPDIARMDLTAYERMIAEEVLDPDQLDGGFDTIGGLEQQKREIFELAVLPLKRPDLFNKRGRLLSSPKGLLFYGAPGTGKTMLAKAIARESGAAFINLRMSTLMNKYFGESNKLVAAVFSLAYKLAPSIIFIDEIESFLRARGGNDEAPWISLKAEFMTLWDGVLTDS----AVPIMVLGASNRPYDLDPAILRRLPRQFEIPLPGPSERAHILQLLLKEEHIDLQSVKVERLAADTDGYSGSDLKEMCRAAVMIPIRDVMPMPANGSLNTLDVESIQSADFRMVKMADFHVAMKRVKPTGHAAQDYQ 440
            M ++ SS+R+ +  S     N +  D +A+G+ +V   + A+  Y ++ ++K +   I P   +      T+  L ++L R   A    T +E +IA +++DP  +   FD IGGLE QKR+I++L +LPLK P  FN RG+LLS PKG+L YG PGTGKTMLAKAIA+ESGA FI+L++STLM+K+FGES KLV A FSLA KLAP IIFIDE++SF+  RGG  +  + ++K EF+ LWDG    S       ++VLGA+NRP+D+DPA LRR+PR FEI LP  ++R  IL L L+ E +D       RL+ DT  YSGSDLKE+CRAA+MIP+R+ +    N      D E  +    R + + DF  A   V+PTG +A  Y+
Sbjct:    1 MGKQNSSNRDATVESSSIDQNNQSRDLKALGSDLVGIIIDAVMLYGVWVTSKYIYKSIKPRIDELRQNGGTRTKLQQRLLRSGRATFQTTFHEDVIAGDIVDPFDIPVTFDDIGGLESQKRDIYDLVILPLKCPRFFNTRGKLLSVPKGILLYGKPGTGKTMLAKAIAKESGAFFIDLKISTLMSKWFGESQKLVRAAFSLASKLAPCIIFIDEVDSFMGKRGGASDPTYSTMKTEFLALWDGFAEISNAGQGFGVIVLGATNRPFDVDPAFLRRMPRTFEIGLPDQNQREKILTLHLQNEDVD-SDFDFRRLSLDTVSYSGSDLKELCRAALMIPLRECLEKAGNSIPKEDDSEECR-MQLRPLSLVDFKEARNMVQPTGVSAYAYE 386          
BLAST of NO13G02330 vs. NCBI_GenBank
Match: XP_024579251.1 (msp1 family protein [Plasmopara halstedii] >CEG42882.1 msp1 family protein [Plasmopara halstedii])

HSP 1 Score: 309.3 bits (791), Expect = 2.200e-80
Identity = 186/435 (42.76%), Postives = 256/435 (58.85%), Query Frame = 0
Query:   65 VSSSREVSENSNGR------GIDKRAIGALVVEFALTALGYYILYQSTKGLIGMIDPTKKDKDSVAQTKEALAKKLNRPDIARMDLTAYERMIAEEVLDPDQLDGGFDTIGGLEQQKREIFELAVLPLKRPDLFNKRGRLLSSPKGLLFYGAPGTGKTMLAKAIARESGAAFINLRMSTLMNKYFGESNKLVAAVFSLAYKLAPSIIFIDEIESFLRARGGNDEAPWISLKAEFMTLWDGVL-----TDSAVPIMVLGASNRPYDLDPAILRRLPRQFEIPLPGPSERAHILQLLLKEEHIDLQSVKVERLAADTDGYSGSDLKEMCRAAVMIPIRD-------VMPMPANGSLN----TL---DVESIQSADFRMVKMADFHVAMKRVKPTGHAAQDYQQRE----GAQAVNTARMTPAFMNAALSMFLHSVMQ 471
            + SS   SE SNG+        D  +    ++   L  L  + +YQ++K L   I P   D D    ++  L  +L R        + +E +IA +++DP  +D  F+ IGGLE+QKR+I++L VLPLK P+ F  RG LL+ PKG+L YG PGTGKTMLAKAIA+ESGA FI+L++ST+M+K+FGES KLV A FSLA KLAP IIFIDE++SF+  RGG  +  + S+K EF+ LWDG             ++++GA+NRP D+DPA LRR+PR FEI LP   +R  IL+L LK E ID  +    +LA DT  YSGSDLKE+CRAA+MIP+R+            AN   +    TL   +   I +   R + MADF  A   V+PTG  A  Y+Q +      +  + + + P    A L+  L ++MQ
Sbjct:    1 MGSSSSKSEASNGKQQSTSNTNDTVSFKNELLGMVLDGLMLFAMYQTSKYLYKQIKPMIDDWDKGQDSQAKLKNRLQRTGRRAFKTSYFENIIAGDIIDPHDIDVTFEDIGGLERQKRDIYDLVVLPLKSPEFFASRGTLLTVPKGILLYGKPGTGKTMLAKAIAKESGAFFIDLKISTIMSKWFGESQKLVQAAFSLAQKLAPCIIFIDEVDSFMGKRGGVSDQTFSSMKTEFLALWDGFTEMTNGDGGGFGVLIMGATNRPGDVDPAFLRRMPRTFEIGLPNKLQREKILRLQLKSERID-DNFDYTKLAVDTMDYSGSDLKELCRAALMIPLREHIDNCRAAEEEAANRQTDEHEETLIYDETAPINALTMRPLSMADFDEARTMVQPTGATAYAYEQSQEEVRPLRQASGSSIDPDIFAAVLAAGLQNLMQ 434          
BLAST of NO13G02330 vs. NCBI_GenBank
Match: XP_002986862.1 (ATPase family AAA domain-containing protein 1-B [Selaginella moellendorffii] >EFJ11944.1 hypothetical protein SELMODRAFT_182690 [Selaginella moellendorffii])

HSP 1 Score: 306.2 bits (783), Expect = 1.800e-79
Identity = 160/329 (48.63%), Postives = 225/329 (68.39%), Query Frame = 0
Query:  113 IDPTKKDKDSVAQTKEALAKKLNRPDIARMDLTAYERMIAEEVLDPDQLDGGFDTIGGLEQQKREIFELAVLPLKRPDLFNKRGRLLSSPKGLLFYGAPGTGKTMLAKAIARESGAAFINLRMSTLMNKYFGESNKLVAAVFSLAYKLAPSIIFIDEIESFLRARGGNDEAPWISLKAEFMTLWDGVLTDSAVPIMVLGASNRPYDLDPAILRRLPRQFEIPLPGPSERAHILQLLLKEEHIDLQSVKVERLAADTDGYSGSDLKEMCRAAVMIPIRDVMPMPANGSLNTLDVESIQSADFRMVKMADFHVAMKRVKPTGHAAQDYQQR 442
            +DP +      A+ K+ +AK+L R   + +   +YE MIA +V++P+ +D  FD+IGGLE  K  +FEL +LPL+RP+LF   G+LL   KG+L YG PGTGKT+LAKAIA+ES A FIN+R++TLM+K+FG++ KLV AVFSLAYKL PSIIFIDE++SFL  R   +      +K EFM LWDG  TD +  +MVL A+NRP++LD AILRRLPR FE+ +P   +RA IL+++LK+E ++   V ++ LA+ T+ YSGSDL E+C+ A  +PIRD++    NG  + L     Q+A  R +K +DF   ++  + +  AA DYQ R
Sbjct:   33 LDPNRYQAKKAAERKKEIAKRLGR---SLVQTNSYEDMIACDVINPEDIDVTFDSIGGLEDVKSSLFELVILPLQRPELF-AHGKLLGPQKGVLLYGPPGTGKTLLAKAIAKESRAVFINVRIATLMSKWFGDAQKLVTAVFSLAYKLQPSIIFIDEVDSFLGQRRATEHESMTHMKTEFMALWDGFTTDQSARVMVLAATNRPWELDEAILRRLPRAFEVGMPDARQRASILRVILKDEAVE-DEVNIDYLASLTENYSGSDLTELCKQAAYLPIRDLLEKEKNGHSSEL-----QTA--RPLKQSDFETVLQNARSSKDAAYDYQNR 349          
BLAST of NO13G02330 vs. NCBI_GenBank
Match: XP_024519588.1 (ATPase family AAA domain-containing protein 1-B [Selaginella moellendorffii])

HSP 1 Score: 306.2 bits (783), Expect = 1.800e-79
Identity = 158/329 (48.02%), Postives = 222/329 (67.48%), Query Frame = 0
Query:  113 IDPTKKDKDSVAQTKEALAKKLNRPDIARMDLTAYERMIAEEVLDPDQLDGGFDTIGGLEQQKREIFELAVLPLKRPDLFNKRGRLLSSPKGLLFYGAPGTGKTMLAKAIARESGAAFINLRMSTLMNKYFGESNKLVAAVFSLAYKLAPSIIFIDEIESFLRARGGNDEAPWISLKAEFMTLWDGVLTDSAVPIMVLGASNRPYDLDPAILRRLPRQFEIPLPGPSERAHILQLLLKEEHIDLQSVKVERLAADTDGYSGSDLKEMCRAAVMIPIRDVMPMPANGSLNTLDVESIQSADFRMVKMADFHVAMKRVKPTGHAAQDYQQR 442
            +DP +      A+ K+ +AK+L R   + +   +YE MIA +V++P+ +D  FD+IGGLE  K  +FEL +LPL+RP+LF   G+LL   KG+L YG PGTGKT+LAKAIA+ES A FIN+R++TLM+K+FG++ KLV AVFSLAYKL PSIIFIDE++SFL  R   +      +K EFM LWDG  TD +  +MVL A+NRP++LD AILRRLPR FE+ +P   +RA IL+++LK+E ++   V ++ LA+ T+ YSGSDL E+C+ A  +PIRD++    NG        S +    R +K +DF   ++  + +  AA DYQ R
Sbjct:   33 LDPNRYQAKKAAERKKEIAKRLGR---SLVQTNSYEDMIACDVINPEDIDVTFDSIGGLEDVKSSLFELVILPLQRPELF-AHGKLLGPQKGVLLYGPPGTGKTLLAKAIAKESRAVFINVRIATLMSKWFGDAQKLVTAVFSLAYKLQPSIIFIDEVDSFLGQRRATEHESMTHMKTEFMALWDGFTTDQSARVMVLAATNRPWELDEAILRRLPRAFEVGMPDARQRASILRVILKDEAVE-DEVNIDYLASLTENYSGSDLTELCKQAAYLPIRDLLEKEKNG-------HSSEQQTARPLKQSDFETVLQNARSSKDAAYDYQNR 349          
BLAST of NO13G02330 vs. NCBI_GenBank
Match: XP_008913559.1 (hypothetical protein PPTG_17635 [Phytophthora parasitica INRA-310] >ETI34756.1 hypothetical protein F443_18820 [Phytophthora parasitica P1569] >ETK75053.1 hypothetical protein L915_18288 [Phytophthora parasitica] >ETL28474.1 hypothetical protein L916_18197 [Phytophthora parasitica] >ETL81729.1 hypothetical protein L917_18012 [Phytophthora parasitica] >ETM34935.1 hypothetical protein L914_18095 [Phytophthora parasitica] >ETN01232.1 hypothetical protein PPTG_17635 [Phytophthora parasitica INRA-310] >ETO63509.1 hypothetical protein F444_18806 [Phytophthora parasitica P1976] >ETP04607.1 hypothetical protein F441_18672 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 305.4 bits (781), Expect = 3.100e-79
Identity = 177/399 (44.36%), Postives = 239/399 (59.90%), Query Frame = 0
Query:   66 SSSREVSENSNGRGIDKRAIGALVVEFALTALGYYILYQSTKGLIGMIDPTKKDKDSVAQTKEALAKKLNRPDIARMDLTAYERMIAEEVLDPDQLDGGFDTIGGLEQQKREIFELAVLPLKRPDLFNKRGRLLSSPKGLLFYGAPGTGKTMLAKAIARESGAAFINLRMSTLMNKYFGESNKLVAAVFSLAYKLAPSIIFIDEIESFLRARGGNDEAPWISLKAEFMTLWDGVL-----TDSAVPIMVLGASNRPYDLDPAILRRLPRQFEIPLPGPSERAHILQLLLKEEHIDLQSVKVERLAADTDGYSGSDLKEMCRAAVMIPIRD----VMPMPANGSLN-TLDVESIQSAD---------FRMVKMADFHVAMKRVKPTGHAAQDYQQREGAQ 446
            SS     + S+  G D  +    ++   L  L  Y +YQ++K L   + P   D      ++  L  +L R      +   +E +IA +++DP  +D  F+ IGGLE+QKR+I +L VLPLK P+ F  RG+LL+ PKG+L YG PGTGKTMLAKAIA+ESGA FI+L++ST+M+K+FGES KLV A FSLA KLAP IIFIDE++SF+  RGG  +  + S+K EF+ LWDG        D    ++++GA+NRP D+DPA LRR+PR FEI LP   +R  IL+L LK E +D  S    +LA DT  YSGSDLKE+CRAA+MIP+R+            + N T+  E  Q  D          R + MADF  A   V+PTG  A  Y+  +  Q
Sbjct:    5 SSKDSSGKQSSSNGNDAVSARDEILGMVLDGLMLYTMYQTSKYLYKQLKPMMDDWSKGQDSQAKLQNRLKRTGRRVFNTNYFENVIAGDIVDPQDIDVSFEDIGGLERQKRDIHDLVVLPLKSPEFFASRGKLLTVPKGILLYGKPGTGKTMLAKAIAKESGAFFIDLKISTIMSKWFGESQKLVRAAFSLARKLAPCIIFIDEVDSFMGKRGGVSDPTFSSMKTEFLALWDGFTEMSTEDDGGFGVIIMGATNRPGDVDPAFLRRMPRTFEIGLPNRPQREKILRLQLKTERVD-DSFDFAQLANDTMYYSGSDLKELCRAALMIPLREHIDNCRAAAEEAAKNPTVKDEKPQIYDEAAQPEPPTMRPLSMADFDEARTMVQPTGATAYAYENAQEDQ 402          
BLAST of NO13G02330 vs. NCBI_GenBank
Match: ETP32744.1 (hypothetical protein F442_18631 [Phytophthora parasitica P10297])

HSP 1 Score: 305.4 bits (781), Expect = 3.100e-79
Identity = 177/399 (44.36%), Postives = 239/399 (59.90%), Query Frame = 0
Query:   66 SSSREVSENSNGRGIDKRAIGALVVEFALTALGYYILYQSTKGLIGMIDPTKKDKDSVAQTKEALAKKLNRPDIARMDLTAYERMIAEEVLDPDQLDGGFDTIGGLEQQKREIFELAVLPLKRPDLFNKRGRLLSSPKGLLFYGAPGTGKTMLAKAIARESGAAFINLRMSTLMNKYFGESNKLVAAVFSLAYKLAPSIIFIDEIESFLRARGGNDEAPWISLKAEFMTLWDGVL-----TDSAVPIMVLGASNRPYDLDPAILRRLPRQFEIPLPGPSERAHILQLLLKEEHIDLQSVKVERLAADTDGYSGSDLKEMCRAAVMIPIRD----VMPMPANGSLN-TLDVESIQSAD---------FRMVKMADFHVAMKRVKPTGHAAQDYQQREGAQ 446
            SS     + S+  G D  +    ++   L  L  Y +YQ++K L   + P   D      ++  L  +L R      +   +E +IA +++DP  +D  F+ IGGLE+QKR+I +L VLPLK P+ F  RG+LL+ PKG+L YG PGTGKTMLAKAIA+ESGA FI+L++ST+M+K+FGES KLV A FSLA KLAP IIFIDE++SF+  RGG  +  + S+K EF+ LWDG        D    ++++GA+NRP D+DPA LRR+PR FEI LP   +R  IL+L LK E +D  S    +LA DT  YSGSDLKE+CRAA+MIP+R+            + N T+  E  Q  D          R + MADF  A   V+PTG  A  Y+  +  Q
Sbjct:    6 SSKDSSGKQSSSNGNDAVSARDEILGMVLDGLMLYTMYQTSKYLYKQLKPMMDDWSKGQDSQAKLQNRLKRTGRRVFNTNYFENVIAGDIVDPQDIDVSFEDIGGLERQKRDIHDLVVLPLKSPEFFASRGKLLTVPKGILLYGKPGTGKTMLAKAIAKESGAFFIDLKISTIMSKWFGESQKLVRAAFSLARKLAPCIIFIDEVDSFMGKRGGVSDPTFSSMKTEFLALWDGFTEMSTEDDGGFGVIIMGATNRPGDVDPAFLRRMPRTFEIGLPNRPQREKILRLQLKTERVD-DSFDFAQLANDTMYYSGSDLKELCRAALMIPLREHIDNCRAAAEEAAKNPTVKDEKPQIYDEAAQPEPPTMRPLSMADFDEARTMVQPTGATAYAYENAQEDQ 403          
BLAST of NO13G02330 vs. NCBI_GenBank
Match: EFJ08867.1 (hypothetical protein SELMODRAFT_130943 [Selaginella moellendorffii])

HSP 1 Score: 305.1 bits (780), Expect = 4.100e-79
Identity = 159/341 (46.63%), Postives = 224/341 (65.69%), Query Frame = 0
Query:  113 IDPTKKDKDSVAQTKEALAKKLNRPDIARMDLTAYERMIAEEVLDPDQLDGGFDTIGGLEQQKREIFELAVLPLKRPDLFNKRGRLLSSPKGLLFYGAPGTGKTMLAKAIARESGAAFINLRMSTLMNKYFGESNKLVAAVFSLAYKLAPSIIFIDEIESFLRARGGNDEAPWISLKAEFMTLWDGVLTDSAVPIMVLGASNRPYDLDPAILRRLPRQFEIPLPGPSERAHILQLLLKEEHIDLQSVKVERLAADTDGYSGSDLKEMCRAAVMIPIRDVMPMPANGSLNTLDVESIQSADF------------RMVKMADFHVAMKRVKPTGHAAQDYQQR 442
            +DP +      A+ K+ +AK+L R   + +   +YE MIA +V++P+ +D  FD+IGGLE  K  +FEL +LPL+RP+LF   G+LL   KG+L YG PGTGKT+LAKAIA+ES A FIN+R++TLM+K+FG++ KLV AVFSLAYKL PSIIFIDE++SFL  R   +      +K EFM LWDG  TD +  +MVL A+NRP++LD AILRRLPR FE+ +P   +RA IL+++LK+E ++   V ++ LA+ T+ YSGSDL E+C+ A  +PIRD++    NG  +   V  + S               R +K +DF   ++  + +  AA DYQ R
Sbjct:   33 LDPNRYQAKKAAERKKEIAKRLGR---SLVQTNSYEDMIACDVINPEDIDVTFDSIGGLEDVKSSLFELVILPLQRPELF-AHGKLLGPQKGVLLYGPPGTGKTLLAKAIAKESRAVFINVRIATLMSKWFGDAQKLVTAVFSLAYKLQPSIIFIDEVDSFLGQRRATEHESMTHMKTEFMALWDGFTTDQSARVMVLAATNRPWELDEAILRRLPRAFEVGMPDARQRASILRVILKDEAVE-DEVNIDYLASLTENYSGSDLTELCKQAAYLPIRDLLEKEKNGHSSEQQVTELSSHSLIDLICVDWWQTARPLKQSDFETVLQNARSSKDAAYDYQNR 368          
BLAST of NO13G02330 vs. NCBI_GenBank
Match: XP_009516748.1 (hypothetical protein PHYSODRAFT_473306 [Phytophthora sojae] >EGZ29473.1 hypothetical protein PHYSODRAFT_473306 [Phytophthora sojae])

HSP 1 Score: 304.3 bits (778), Expect = 7.000e-79
Identity = 181/416 (43.51%), Postives = 249/416 (59.86%), Query Frame = 0
Query:   94 LTALGYYILYQSTKGLI--------GMIDPTKKDKDSVAQTKEALAKKLNRPDIARMDLTAYERMIAEEVLDPDQLDGGFDTIGGLEQQKREIFELAVLPLKRPDLFNKRGRLLSSPKGLLFYGAPGTGKTMLAKAIARESGAAFINLRMSTLMNKYFGESNKLVAAVFSLAYKLAPSIIFIDEIESFLRARGGNDEAPWISLKAEFMTLWDGVL-----TDSAVPIMVLGASNRPYDLDPAILRRLPRQFEIPLPGPSERAHILQLLLKEEHIDLQSVKVERLAADTDGYSGSDLKEMCRAAVMIPIRDVMP------------MPANGSLNTLDVESI--QSADFRMVKMADFHVAMKRVKPTGHAAQDYQQREGAQAVNTA-----RMTPAFMNAALSMFLHSVMQGGGGQAP 478
            L  L  Y +YQ++K L          M+D  ++ +DS A+    L  +L R      +   +E +IA +++DP  +D  FD IGGLE+QKR+I++L VLPLK P+ F  RG+LL+ PKG+L YG PGTGKTM+AKAIA+ESGA FI+L++ST+M+K+FGES KLV A FSLA KLAP IIFIDE++SF+  RGG  +  + S+K EF+ LWDG        D    ++++GA+NRP D+DPA LRR+PR FEI LP   +R  IL+L LK E +D       +LA DT  YSGSDLKE+CRAA+MIP+R+ +              PA G    +  ES   Q    R + MADF  A   V+PTG  A  Y+  +  ++   A      + P    A ++  L ++MQ     +P
Sbjct:    3 LDGLMLYTMYQTSKYLYKASHRQLKPMMDDWRQGQDSQAK----LQNRLQRTGRRVFNTNYFENVIAGDIVDPQDIDVSFDDIGGLERQKRDIYDLVVLPLKSPEFFASRGKLLTVPKGILLYGKPGTGKTMMAKAIAKESGAFFIDLKISTIMSKWFGESQKLVRAAFSLARKLAPCIIFIDEVDSFMGKRGGVSDPTFSSMKTEFLALWDGFTEMSTEEDCGFGVIIMGATNRPGDVDPAFLRRMPRTFEIGLPNRPQREKILRLQLKTERVD-DHFDFSQLANDTMYYSGSDLKELCRAALMIPLREHIDNCRAAAEEAEKNRPAEGEKPQIYDESAAPQPPTMRPLSMADFDEARTMVQPTGATAYAYENAQEEKSARPASGPGMSIDPDMFAALMAAGLQNLMQQSRNVSP 413          
The following BLAST results are available for this feature:
BLAST of NO13G02330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21895.17.300e-16970.72atpase family aaa domain-containing protein [Nanno... [more]
GBG28793.14.700e-8346.5226S proteasome regulatory subunit 8-like [Aurantio... [more]
CCA26236.16.700e-8245.62ATPase putative [Albugo laibachii Nc14][more]
XP_024579251.12.200e-8042.76msp1 family protein [Plasmopara halstedii] >CEG428... [more]
XP_002986862.11.800e-7948.63ATPase family AAA domain-containing protein 1-B [S... [more]
XP_024519588.11.800e-7948.02ATPase family AAA domain-containing protein 1-B [S... [more]
XP_008913559.13.100e-7944.36hypothetical protein PPTG_17635 [Phytophthora para... [more]
ETP32744.13.100e-7944.36hypothetical protein F442_18631 [Phytophthora para... [more]
EFJ08867.14.100e-7946.63hypothetical protein SELMODRAFT_130943 [Selaginell... [more]
XP_009516748.17.000e-7943.51hypothetical protein PHYSODRAFT_473306 [Phytophtho... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001659NSK001659Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02330.1NO13G02330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596289gene_6777Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100231g11gene8537Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02330.1NO13G02330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02330 ID=NO13G02330|Name=NO13G02330|organism=Nannochloropsis oceanica|type=gene|length=2054bp
TCATCATCGAGTTGCCGCACACACTGGCAAGCAATAGGTGGAGCCGGGGG
ATGCGAACTCGTAGGCGGACCTGACCTTGGCTCACGCCCCTCATTTCCCG
TCCATTTACTGTCAACCCCACTCCATGTCAGTCCATCACCATACACATCC
TTGGCAATCCTCTCTCGGTAGCCAGGCAGCAACGTGGGCGAGGGTAGCCA
GCCTATCAACGTTTCAACGGCTTCCTTCATCAGAGGCGACTAACATACTG
CATTACACCCTTCCCACACATGCACAGTCAGCCGAAGACGGCATTATACC
CGCAATGTTTAGACGGGTGTCCAGCTCCCGGGAGGTGTCCGAGAACAGCA
ATGGAAGGGGAATAGACAAGCGGGCGATTGGGGCCCTCGTGGTGGAGTTT
GCCTTGACCGCCCTGGGCTACTACATATTGTACCAGTCGACCAAGGGCCT
TATCGGTATGATTGATCCCACTAAGAAGGACAAGGACTCCGTGGCGCAGg
tagggcgcagggttcggtcgaaggggttcaaaacttgccctaaccctaac
tctaacagcttaacagcttttagtgcgaatgtagcgactccttttaccca
catacggtagagtacgcaggcgcctctctccttcacccacgagggatctg
gttgtcacaaatgaatagctttacgtattcccacctcttggtcttctcca
gtccctcgtcatgccacactcttcttatcactccacgcgcacagACAAAA
GAAGCCCTGGCCAAGAAGCTGAACCGGCCTGACATAGCCCGCATGGACCT
GACGGCCTACGAACGCATGATTGCCGAGGAGGTATTAGACCCAGACCAAC
TGGATGGAGGTTTCGACACCATAGGTGGGCTCGAGCAGCAAAAACGAGAA
ATTTTCGAATTAGCCGTCTTGCCGCTGAAGCGCCCCGACCTCTTCAACAA
GCGCGGCCGGCTCTTGTCATCACCAAAAGGTCTGTTGTTCTACGGGGCGC
CGGGGACGGGAAAGACGATGCTGGCCAAGGCAATTGCCCGGGAATCGGGC
GCGGCCTTTATCAACCTACGGATGAGCACCCTGATGAACAAGTACTTTGG
AGAGTCCAACAAATTGGTGGCTGCCGTCTTCTCACTCGCTTACAAGCTGG
CCCCGTCCATCATCTTCATAGATGAAATCGAATCTTTTCTCCGAGCCCGG
GGAGGGAATGACGAGGCACCTTGGATCTCACTTAAGGCTGAATTCATGAC
GTTATGGGATGGCGTTCTTACCGACAGCGCTGTCCCTATCATGGTCCTAG
GGGCTAGCAACCGACCTTATGATCTCGACCCTGCGATTCTCCGTCGCTTG
CCCCGTCAGTTCGAGATCCCGTTGCCGGGGCCCTCGGAACGTGCTCACAT
CTTGCAGTTGCTATTGAAAGAGGAGCACATCGACCTGCAATCTGTCAAGG
TGGAGCGGCTGGCGGCGGATACGGATGGGTACTCCGGAAGTGACTTGAAG
GAGATGTGCCGTGCGGCCGTGATGATCCCGATCCGGGACGTGATGCCCAT
GCCAGCAAATGGAAGTTTAAACACGCTTGATGTGGAGAGCATACAATCAG
CAGATTTCCGAATGGTCAAGATGGCGGACTTCCACGTAGCCATGAAGAGG
GTCAAGCCGACGGGACACGCAGCGCAGGATTACCAGCAGAGGGAAGGGGC
GCAGGCCGTGAATACCGCGAGAATGACACCAGCTTTCATGAATGCCGCCT
TATCGATGTTTTTGCACAGTGTGATGCAGGGAGGAGGGGGCCAGGCACCA
CAGGGGCCACCTGGGTCAGCGAATGGGCATGATGGGAATAATGGATGGCC
GAACGGGACGCGGTGAGAAGAGAGGAAAGGAGATAGAGTAGAGGATAAAA
GAAAACAGAGACTTTGAGTTCCTCCTGTGTTGATAAAAAAAGCCATCAAA
ATGGACCAAATTCCAAGTGAGTGAGTCAAGAAATGGTAAGGCCCAAAGAA
GCGGCGGGGGCAACAGCAAAAGCCGCCAGAAAACGAAAGCCACACAACTC
ACAA
back to top

protein sequence of NO13G02330.1

>NO13G02330.1-protein ID=NO13G02330.1-protein|Name=NO13G02330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=499bp
MSVHHHTHPWQSSLGSQAATWARVASLSTFQRLPSSEATNILHYTLPTHA
QSAEDGIIPAMFRRVSSSREVSENSNGRGIDKRAIGALVVEFALTALGYY
ILYQSTKGLIGMIDPTKKDKDSVAQTKEALAKKLNRPDIARMDLTAYERM
IAEEVLDPDQLDGGFDTIGGLEQQKREIFELAVLPLKRPDLFNKRGRLLS
SPKGLLFYGAPGTGKTMLAKAIARESGAAFINLRMSTLMNKYFGESNKLV
AAVFSLAYKLAPSIIFIDEIESFLRARGGNDEAPWISLKAEFMTLWDGVL
TDSAVPIMVLGASNRPYDLDPAILRRLPRQFEIPLPGPSERAHILQLLLK
EEHIDLQSVKVERLAADTDGYSGSDLKEMCRAAVMIPIRDVMPMPANGSL
NTLDVESIQSADFRMVKMADFHVAMKRVKPTGHAAQDYQQREGAQAVNTA
RMTPAFMNAALSMFLHSVMQGGGGQAPQGPPGSANGHDGNNGWPNGTR*
back to top
Synonyms
Publications